RNA–Protein interactions for RNA: ENST00000492396.5

PDCD10-216, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-216ENST00000492396 USP17L2Q6R6M4 530 aa11.35□□□□□ -0.59
PDCD10-216ENST00000492396 USP17L1Q7RTZ2 530 aa11.35□□□□□ -0.59
PDCD10-216ENST00000492396 OSBPL3Q9H4L5 887 aa11.35□□□□□ -0.59
PDCD10-216ENST00000492396 ATP13A2Q9NQ11 1180 aa11.35□□□□□ -0.59
PDCD10-216ENST00000492396 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
PDCD10-216ENST00000492396 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
PDCD10-216ENST00000492396 UPP2O95045 317 aa11.34□□□□□ -0.59
PDCD10-216ENST00000492396 NCOA4Q13772 614 aa11.34□□□□□ -0.59
PDCD10-216ENST00000492396 CYP2U1Q7Z449 544 aa11.34□□□□□ -0.59
PDCD10-216ENST00000492396 TRIM46Q7Z4K8 759 aa11.34□□□□□ -0.59
PDCD10-216ENST00000492396 LINC00528Q8N1L1 170 aa11.34□□□□□ -0.59
PDCD10-216ENST00000492396 CCDC97Q96F63 343 aaPredicted RBP11.33□□□□□ -0.6
PDCD10-216ENST00000492396 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
PDCD10-216ENST00000492396 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
PDCD10-216ENST00000492396 BMP1P13497 986 aa11.32□□□□□ -0.6
PDCD10-216ENST00000492396 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
PDCD10-216ENST00000492396 DACH1Q9UI36 760 aa11.32□□□□□ -0.6
PDCD10-216ENST00000492396 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
PDCD10-216ENST00000492396 SCARF1Q14162 830 aa11.31□□□□□ -0.6
PDCD10-216ENST00000492396 CFAP70Q5T0N1 1121 aa11.31□□□□□ -0.6
PDCD10-216ENST00000492396 DEPDC4Q8N2C3 294 aa11.31□□□□□ -0.6
PDCD10-216ENST00000492396 PTGIRP43119 386 aa11.3□□□□□ -0.6
PDCD10-216ENST00000492396 AGBL1Q96MI9 1066 aa11.3□□□□□ -0.6
PDCD10-216ENST00000492396 SPINT1O43278 529 aa11.29□□□□□ -0.6
PDCD10-216ENST00000492396 GNRH1P01148 92 aa11.29□□□□□ -0.6
PDCD10-216ENST00000492396 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
PDCD10-216ENST00000492396 CCDC82Q8N4S0 544 aa11.29□□□□□ -0.6
PDCD10-216ENST00000492396 SUPT5HO00267 1087 aaKnown RBP11.28□□□□□ -0.6
PDCD10-216ENST00000492396 BMP2P12643 396 aa11.28□□□□□ -0.6
PDCD10-216ENST00000492396 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
PDCD10-216ENST00000492396 RELBQ01201 579 aa11.28□□□□□ -0.6
PDCD10-216ENST00000492396 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
PDCD10-216ENST00000492396 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
PDCD10-216ENST00000492396 ZFP42Q96MM3 310 aa11.27□□□□□ -0.61
PDCD10-216ENST00000492396 MKRN1Q9UHC7 482 aaKnown RBP11.27□□□□□ -0.61
PDCD10-216ENST00000492396 PCDHGA11Q9Y5H2 935 aa11.27□□□□□ -0.61
PDCD10-216ENST00000492396 ATP1A2P50993 1020 aa11.26□□□□□ -0.61
PDCD10-216ENST00000492396 GTF2IP78347 998 aa11.26□□□□□ -0.61
PDCD10-216ENST00000492396 C6orf118Q5T5N4 469 aa11.26□□□□□ -0.61
PDCD10-216ENST00000492396 KIFC2Q96AC6 838 aa11.26□□□□□ -0.61
PDCD10-216ENST00000492396 CLN3Q13286 438 aa11.25□□□□□ -0.61
PDCD10-216ENST00000492396 ZNF395Q9H8N7 513 aaPredicted RBP11.25□□□□□ -0.61
PDCD10-216ENST00000492396 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
PDCD10-216ENST00000492396 ESCO1Q5FWF5 840 aa11.24□□□□□ -0.61
PDCD10-216ENST00000492396 KANK4Q5T7N3 995 aaPredicted RBP11.24□□□□□ -0.61
PDCD10-216ENST00000492396 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
PDCD10-216ENST00000492396 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
PDCD10-216ENST00000492396 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
PDCD10-216ENST00000492396 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
PDCD10-216ENST00000492396 VRTNQ9H8Y1 702 aa11.23□□□□□ -0.61
PDCD10-216ENST00000492396 CLDN10P78369 228 aa11.22□□□□□ -0.61
PDCD10-216ENST00000492396 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
PDCD10-216ENST00000492396 LARGE2Q8N3Y3 721 aa11.22□□□□□ -0.61
PDCD10-216ENST00000492396 OGFOD1Q8N543 542 aa11.22□□□□□ -0.61
PDCD10-216ENST00000492396 INSM2Q96T92 566 aaPredicted RBP11.22□□□□□ -0.61
PDCD10-216ENST00000492396 GPC1P35052 558 aa11.21□□□□□ -0.61
PDCD10-216ENST00000492396 SCNN1DP51172 638 aa11.21□□□□□ -0.61
PDCD10-216ENST00000492396 ESYT1Q9BSJ8 1104 aa11.21□□□□□ -0.61
PDCD10-216ENST00000492396 ETNK1Q9HBU6 452 aa11.21□□□□□ -0.61
PDCD10-216ENST00000492396 DNAAF2Q9NVR5 837 aaKnown RBP11.21□□□□□ -0.61
PDCD10-216ENST00000492396 RFX1P22670 979 aa11.2□□□□□ -0.62
PDCD10-216ENST00000492396 GDF10P55107 478 aa11.2□□□□□ -0.62
PDCD10-216ENST00000492396 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
PDCD10-216ENST00000492396 SIX5Q8N196 739 aa11.2□□□□□ -0.62
PDCD10-216ENST00000492396 XAGE2Q96GT9 111 aa11.2□□□□□ -0.62
PDCD10-216ENST00000492396 RAB6BQ9NRW1 208 aa11.2□□□□□ -0.62
PDCD10-216ENST00000492396 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 TTLL8A6PVC2 850 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 MEN1O00255 615 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 ZBTB7BO15156 539 aaPredicted RBP11.19□□□□□ -0.62
PDCD10-216ENST00000492396 IL2RAP01589 272 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 INHAP05111 366 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 RASA1P20936 1047 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 CTSOP43234 321 aaPredicted RBP11.19□□□□□ -0.62
PDCD10-216ENST00000492396 RNF144AP50876 292 aaPredicted RBP11.19□□□□□ -0.62
PDCD10-216ENST00000492396 PSME1Q06323 249 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 CNKSR1Q969H4 720 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 POLMQ9NP87 494 aaPredicted RBP11.19□□□□□ -0.62
PDCD10-216ENST00000492396 KIAA1024Q9UPX6 916 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 HRH3Q9Y5N1 445 aa11.19□□□□□ -0.62
PDCD10-216ENST00000492396 TMEM229AB2RXF0 380 aa11.18□□□□□ -0.62
PDCD10-216ENST00000492396 LARP1Q6PKG0 1096 aaKnown RBP11.18□□□□□ -0.62
PDCD10-216ENST00000492396 PBXIP1Q96AQ6 731 aa11.18□□□□□ -0.62
PDCD10-216ENST00000492396 C11orf95C9JLR9 678 aaPredicted RBP11.17□□□□□ -0.62
PDCD10-216ENST00000492396 PTK7Q13308 1070 aa11.17□□□□□ -0.62
PDCD10-216ENST00000492396 FOXD4L5Q5VV16 416 aaPredicted RBP11.17□□□□□ -0.62
PDCD10-216ENST00000492396 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
PDCD10-216ENST00000492396 RNF217Q8TC41 542 aa11.17□□□□□ -0.62
PDCD10-216ENST00000492396 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.16□□□□□ -0.62
PDCD10-216ENST00000492396 POTECB2RU33 542 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L15C9J2P7 530 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L10C9JJH3 530 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L13C9JLJ4 530 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L12C9JPN9 530 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L11C9JVI0 530 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L21D6R901 530 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L18D6R9N7 530 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L22D6RA61 530 aa11.16□□□□□ -0.62
PDCD10-216ENST00000492396 USP17L17D6RBQ6 530 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms