RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
LCLAT1-211ENST00000491680 SF3B2Q13435 895 aaKnown RBP15.03■□□□□ -0
LCLAT1-211ENST00000491680 RRS1Q15050 365 aaKnown RBP15.03■□□□□ -0
LCLAT1-211ENST00000491680 CCDC125Q86Z20 511 aa15.03■□□□□ -0
LCLAT1-211ENST00000491680 CARD10Q9BWT7 1032 aa15.03■□□□□ -0
LCLAT1-211ENST00000491680 NLRP2Q9NX02 1062 aa15.03■□□□□ -0
LCLAT1-211ENST00000491680 FAM182BQ5T319 152 aa15.03■□□□□ -0
LCLAT1-211ENST00000491680 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
LCLAT1-211ENST00000491680 POLKQ9UBT6 870 aa15.03■□□□□ -0
LCLAT1-211ENST00000491680 LRRC37A3O60309 1634 aa15.02■□□□□ -0
LCLAT1-211ENST00000491680 HOXC9P31274 260 aa15.02□□□□□ -0.01
LCLAT1-211ENST00000491680 RTL1A6NKG5 1358 aa15.02□□□□□ -0.01
LCLAT1-211ENST00000491680 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
LCLAT1-211ENST00000491680 CDCA7Q9BWT1 371 aaPredicted RBP15.01□□□□□ -0.01
LCLAT1-211ENST00000491680 RGPD1P0DJD0 1748 aa15.01□□□□□ -0.01
LCLAT1-211ENST00000491680 MAP2P11137 1827 aaKnown RBP15.01□□□□□ -0.01
LCLAT1-211ENST00000491680 DDB1Q16531 1140 aa15□□□□□ -0.01
LCLAT1-211ENST00000491680 CFAP53Q96M91 514 aa15□□□□□ -0.01
LCLAT1-211ENST00000491680 RRP1P56182 461 aaKnown RBP14.99□□□□□ -0.01
LCLAT1-211ENST00000491680 RGPD2P0DJD1 1756 aa14.99□□□□□ -0.01
LCLAT1-211ENST00000491680 FAM196AQ6ZSG2 479 aa14.99□□□□□ -0.01
LCLAT1-211ENST00000491680 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
LCLAT1-211ENST00000491680 PEAK1Q9H792 1746 aa14.99□□□□□ -0.01
LCLAT1-211ENST00000491680 FLT4P35916 1363 aa14.98□□□□□ -0.01
LCLAT1-211ENST00000491680 PPM1GO15355 546 aaPredicted RBP14.98□□□□□ -0.01
LCLAT1-211ENST00000491680 EMILIN1Q9Y6C2 1016 aa14.98□□□□□ -0.01
LCLAT1-211ENST00000491680 KIF24Q5T7B8 1368 aa14.97□□□□□ -0.01
LCLAT1-211ENST00000491680 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
LCLAT1-211ENST00000491680 TCERG1O14776 1098 aaKnown RBP14.97□□□□□ -0.01
LCLAT1-211ENST00000491680 DISP2A7MBM2 1401 aa14.97□□□□□ -0.01
LCLAT1-211ENST00000491680 EXOC5O00471 708 aa14.96□□□□□ -0.01
LCLAT1-211ENST00000491680 IL2RBP14784 551 aa14.96□□□□□ -0.01
LCLAT1-211ENST00000491680 TNS1Q9HBL0 1735 aaKnown RBP14.96□□□□□ -0.02
LCLAT1-211ENST00000491680 MS4A1P11836 297 aa14.95□□□□□ -0.02
LCLAT1-211ENST00000491680 OVOS2A0A0G2JMS6 1433 aa14.95□□□□□ -0.02
LCLAT1-211ENST00000491680 BAG6P46379 1132 aa14.95□□□□□ -0.02
LCLAT1-211ENST00000491680 HSP90AB2PQ58FF8 381 aa14.95□□□□□ -0.02
LCLAT1-211ENST00000491680 EP400Q96L91 3159 aa14.94□□□□□ -0.02
LCLAT1-211ENST00000491680 TRIM37O94972 964 aa14.94□□□□□ -0.02
LCLAT1-211ENST00000491680 TNS2Q63HR2 1409 aa14.94□□□□□ -0.02
LCLAT1-211ENST00000491680 CCDC146Q8IYE0 955 aa14.94□□□□□ -0.02
LCLAT1-211ENST00000491680 DIAPH1O60610 1272 aaKnown RBP14.93□□□□□ -0.02
LCLAT1-211ENST00000491680 ANP32AP39687 249 aaKnown RBP14.93□□□□□ -0.02
LCLAT1-211ENST00000491680 DEFB132Q7Z7B7 95 aa14.93□□□□□ -0.02
LCLAT1-211ENST00000491680 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
LCLAT1-211ENST00000491680 SBF2Q86WG5 1849 aa14.93□□□□□ -0.02
LCLAT1-211ENST00000491680 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
LCLAT1-211ENST00000491680 IL13P35225 146 aa14.92□□□□□ -0.02
LCLAT1-211ENST00000491680 IPO9Q96P70 1041 aaKnown RBP14.92□□□□□ -0.02
LCLAT1-211ENST00000491680 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
LCLAT1-211ENST00000491680 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
LCLAT1-211ENST00000491680 NBPF6Q5VWK0 638 aa14.91□□□□□ -0.02
LCLAT1-211ENST00000491680 NGEFQ8N5V2 710 aa14.91□□□□□ -0.02
LCLAT1-211ENST00000491680 USHBP1Q8N6Y0 703 aa14.91□□□□□ -0.02
LCLAT1-211ENST00000491680 MARCH10Q8NA82 808 aaPredicted RBP14.91□□□□□ -0.02
LCLAT1-211ENST00000491680 NBPF4Q96M43 638 aa14.91□□□□□ -0.02
LCLAT1-211ENST00000491680 APAF1O14727 1248 aa14.89□□□□□ -0.03
LCLAT1-211ENST00000491680 APBA3O96018 575 aa14.89□□□□□ -0.03
LCLAT1-211ENST00000491680 HOXD11P31277 338 aaPredicted RBP14.89□□□□□ -0.03
LCLAT1-211ENST00000491680 EN1Q05925 392 aaPredicted RBP14.89□□□□□ -0.03
LCLAT1-211ENST00000491680 ZNF521Q96K83 1311 aa14.89□□□□□ -0.03
LCLAT1-211ENST00000491680 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
LCLAT1-211ENST00000491680 IFFO2Q5TF58 517 aa14.88□□□□□ -0.03
LCLAT1-211ENST00000491680 RAPGEF4Q8WZA2 1011 aa14.88□□□□□ -0.03
LCLAT1-211ENST00000491680 RUNDC1Q96C34 613 aa14.88□□□□□ -0.03
LCLAT1-211ENST00000491680 PLEKHF1Q96S99 279 aa14.88□□□□□ -0.03
LCLAT1-211ENST00000491680 SALL2Q9Y467 1007 aaPredicted RBP14.88□□□□□ -0.03
LCLAT1-211ENST00000491680 MEGF6O75095 1541 aa14.87□□□□□ -0.03
LCLAT1-211ENST00000491680 TATP17735 454 aaPredicted RBP14.87□□□□□ -0.03
LCLAT1-211ENST00000491680 EIF4A2Q14240 407 aaKnown RBP14.87□□□□□ -0.03
LCLAT1-211ENST00000491680 DDX54Q8TDD1 881 aaKnown RBP14.87□□□□□ -0.03
LCLAT1-211ENST00000491680 SHANK3Q9BYB0 1731 aa14.86□□□□□ -0.03
LCLAT1-211ENST00000491680 BCL9O00512 1426 aa14.85□□□□□ -0.03
LCLAT1-211ENST00000491680 EZH2Q15910 746 aaKnown RBP14.85□□□□□ -0.03
LCLAT1-211ENST00000491680 ZCRB1Q8TBF4 217 aaKnown RBP14.85□□□□□ -0.03
LCLAT1-211ENST00000491680 RSPH6AQ9H0K4 717 aa14.85□□□□□ -0.03
LCLAT1-211ENST00000491680 NHSQ6T4R5 1651 aa14.85□□□□□ -0.03
LCLAT1-211ENST00000491680 EXOC6Q8TAG9 804 aa14.84□□□□□ -0.03
LCLAT1-211ENST00000491680 BCL11BQ9C0K0 894 aaPredicted RBP14.84□□□□□ -0.03
LCLAT1-211ENST00000491680 KAT6BQ8WYB5 2073 aa14.84□□□□□ -0.03
LCLAT1-211ENST00000491680 FCHSD2O94868 740 aa14.84□□□□□ -0.03
LCLAT1-211ENST00000491680 CDCA7LQ96GN5 454 aa14.84□□□□□ -0.03
LCLAT1-211ENST00000491680 ACSBG1Q96GR2 724 aa14.84□□□□□ -0.03
LCLAT1-211ENST00000491680 EYA1Q99502 592 aa14.84□□□□□ -0.03
LCLAT1-211ENST00000491680 ZBTB47Q9UFB7 747 aaPredicted RBP14.84□□□□□ -0.03
LCLAT1-211ENST00000491680 RREB1Q92766 1687 aa14.83□□□□□ -0.04
LCLAT1-211ENST00000491680 DOT1LQ8TEK3 1739 aa14.82□□□□□ -0.04
LCLAT1-211ENST00000491680 RGPD3A6NKT7 1758 aaPredicted RBP14.82□□□□□ -0.04
LCLAT1-211ENST00000491680 RGPD4Q7Z3J3 1758 aa14.82□□□□□ -0.04
LCLAT1-211ENST00000491680 CAMKK2Q96RR4 588 aa14.82□□□□□ -0.04
LCLAT1-211ENST00000491680 HMOX1P09601 288 aa14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 RRP7AQ9Y3A4 280 aaKnown RBP14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 PKD1L3Q7Z443 1732 aa14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 NUP188Q5SRE5 1749 aa14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 PCDH11XQ9BZA7 1347 aa14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 PCDH11YQ9BZA8 1340 aa14.81□□□□□ -0.04
LCLAT1-211ENST00000491680 BTAF1O14981 1849 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms