RNA–Protein interactions for RNA: ENST00000491584.1

PTPN7-214, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-214ENST00000491584 ERBB3P21860 1342 aa16.07■□□□□ 0.16
PTPN7-214ENST00000491584 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-214ENST00000491584 UTRNP46939 3433 aa16.06■□□□□ 0.16
PTPN7-214ENST00000491584 TNS2Q63HR2 1409 aa16.05■□□□□ 0.16
PTPN7-214ENST00000491584 NUDCQ9Y266 331 aa16.05■□□□□ 0.16
PTPN7-214ENST00000491584 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
PTPN7-214ENST00000491584 ANP32CO43423 234 aa16.04■□□□□ 0.16
PTPN7-214ENST00000491584 NHSQ6T4R5 1651 aa16.04■□□□□ 0.16
PTPN7-214ENST00000491584 EXOC5O00471 708 aa16.03■□□□□ 0.16
PTPN7-214ENST00000491584 KCNQ2O43526 872 aa16.03■□□□□ 0.16
PTPN7-214ENST00000491584 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
PTPN7-214ENST00000491584 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
PTPN7-214ENST00000491584 RAPGEF4Q8WZA2 1011 aa16.03■□□□□ 0.16
PTPN7-214ENST00000491584 PDGFDQ9GZP0 370 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-214ENST00000491584 PAPPAQ13219 1627 aa16.03■□□□□ 0.16
PTPN7-214ENST00000491584 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
PTPN7-214ENST00000491584 LTN1O94822 1766 aa16.02■□□□□ 0.15
PTPN7-214ENST00000491584 IL2RBP14784 551 aa16.01■□□□□ 0.15
PTPN7-214ENST00000491584 TATP17735 454 aaPredicted RBP16■□□□□ 0.15
PTPN7-214ENST00000491584 EIF4A2Q14240 407 aaKnown RBP16■□□□□ 0.15
PTPN7-214ENST00000491584 NBPF6Q5VWK0 638 aa16■□□□□ 0.15
PTPN7-214ENST00000491584 NBPF4Q96M43 638 aa16■□□□□ 0.15
PTPN7-214ENST00000491584 MYBBP1AQ9BQG0 1328 aaKnown RBP15.98■□□□□ 0.15
PTPN7-214ENST00000491584 PTGER2P43116 358 aa15.98■□□□□ 0.15
PTPN7-214ENST00000491584 PRKRIP1Q9H875 184 aaPredicted RBP15.98■□□□□ 0.15
PTPN7-214ENST00000491584 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
PTPN7-214ENST00000491584 EYA1Q99502 592 aa15.97■□□□□ 0.15
PTPN7-214ENST00000491584 PNNQ9H307 717 aaKnown RBP15.97■□□□□ 0.15
PTPN7-214ENST00000491584 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
PTPN7-214ENST00000491584 NEFMP07197 916 aa15.96■□□□□ 0.15
PTPN7-214ENST00000491584 IL13P35225 146 aa15.96■□□□□ 0.15
PTPN7-214ENST00000491584 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
PTPN7-214ENST00000491584 ANKRD26Q9UPS8 1709 aa15.96■□□□□ 0.15
PTPN7-214ENST00000491584 ZCRB1Q8TBF4 217 aaKnown RBP15.95■□□□□ 0.14
PTPN7-214ENST00000491584 SGIP1Q9BQI5 828 aa15.95■□□□□ 0.14
PTPN7-214ENST00000491584 BTAF1O14981 1849 aa15.95■□□□□ 0.14
PTPN7-214ENST00000491584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.14
PTPN7-214ENST00000491584 PPP1R1BQ9UD71 204 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-214ENST00000491584 FAM208AQ9UK61 1670 aaKnown RBP15.93■□□□□ 0.14
PTPN7-214ENST00000491584 ZBTB7AO95365 584 aa15.93■□□□□ 0.14
PTPN7-214ENST00000491584 SLC15A2Q16348 729 aa15.93■□□□□ 0.14
PTPN7-214ENST00000491584 AMOTQ4VCS5 1084 aa15.93■□□□□ 0.14
PTPN7-214ENST00000491584 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
PTPN7-214ENST00000491584 SULT6B1Q6IMI4 303 aa15.93■□□□□ 0.14
PTPN7-214ENST00000491584 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
PTPN7-214ENST00000491584 MAP2P11137 1827 aaKnown RBP15.92■□□□□ 0.14
PTPN7-214ENST00000491584 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-214ENST00000491584 YY1P25490 414 aa15.92■□□□□ 0.14
PTPN7-214ENST00000491584 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
PTPN7-214ENST00000491584 GOLGB1Q14789 3259 aaKnown RBP15.92■□□□□ 0.14
PTPN7-214ENST00000491584 IGSF1Q8N6C5 1336 aa15.92■□□□□ 0.14
PTPN7-214ENST00000491584 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
PTPN7-214ENST00000491584 DDX54Q8TDD1 881 aaKnown RBP15.91■□□□□ 0.14
PTPN7-214ENST00000491584 FCHSD2O94868 740 aa15.9■□□□□ 0.14
PTPN7-214ENST00000491584 WDR43Q15061 677 aaKnown RBP eCLIP15.9■□□□□ 0.14
PTPN7-214ENST00000491584 ACSBG1Q96GR2 724 aa15.9■□□□□ 0.14
PTPN7-214ENST00000491584 STK32BQ9NY57 414 aa15.9■□□□□ 0.14
PTPN7-214ENST00000491584 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
PTPN7-214ENST00000491584 PLEKHG2Q9H7P9 1386 aa15.89■□□□□ 0.13
PTPN7-214ENST00000491584 QSER1Q2KHR3 1735 aa15.89■□□□□ 0.13
PTPN7-214ENST00000491584 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
PTPN7-214ENST00000491584 HSP90AB1P08238 724 aaKnown RBP15.88■□□□□ 0.13
PTPN7-214ENST00000491584 ZNF827Q17R98 1081 aa15.88■□□□□ 0.13
PTPN7-214ENST00000491584 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
PTPN7-214ENST00000491584 ATF5Q9Y2D1 282 aaPredicted RBP15.88■□□□□ 0.13
PTPN7-214ENST00000491584 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
PTPN7-214ENST00000491584 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
PTPN7-214ENST00000491584 HMOX1P09601 288 aa15.87■□□□□ 0.13
PTPN7-214ENST00000491584 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
PTPN7-214ENST00000491584 DIEXFQ68CQ4 756 aaKnown RBP15.87■□□□□ 0.13
PTPN7-214ENST00000491584 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
PTPN7-214ENST00000491584 IFNL2Q8IZJ0 200 aa15.86■□□□□ 0.13
PTPN7-214ENST00000491584 TUBGCP6Q96RT7 1819 aa15.86■□□□□ 0.13
PTPN7-214ENST00000491584 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
PTPN7-214ENST00000491584 DOT1LQ8TEK3 1739 aa15.85■□□□□ 0.13
PTPN7-214ENST00000491584 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
PTPN7-214ENST00000491584 SYT17Q9BSW7 474 aa15.85■□□□□ 0.13
PTPN7-214ENST00000491584 FHDC1Q9C0D6 1143 aaPredicted RBP15.85■□□□□ 0.13
PTPN7-214ENST00000491584 LY75O60449 1722 aa15.85■□□□□ 0.13
PTPN7-214ENST00000491584 MEGF6O75095 1541 aa15.84■□□□□ 0.13
PTPN7-214ENST00000491584 AEBP1Q8IUX7 1158 aa15.84■□□□□ 0.13
PTPN7-214ENST00000491584 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
PTPN7-214ENST00000491584 HMGB2P26583 209 aaKnown RBP15.83■□□□□ 0.12
PTPN7-214ENST00000491584 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.12
PTPN7-214ENST00000491584 GAS2L2Q8NHY3 880 aa15.83■□□□□ 0.12
PTPN7-214ENST00000491584 MRS2Q9HD23 443 aa15.83■□□□□ 0.12
PTPN7-214ENST00000491584 KDRP35968 1356 aa15.83■□□□□ 0.12
PTPN7-214ENST00000491584 PRKAR2BP31323 418 aa15.82■□□□□ 0.12
PTPN7-214ENST00000491584 MAPK8IP3Q9UPT6 1336 aa15.82■□□□□ 0.12
PTPN7-214ENST00000491584 NCAPD2Q15021 1401 aa15.82■□□□□ 0.12
PTPN7-214ENST00000491584 KAT6BQ8WYB5 2073 aa15.8■□□□□ 0.12
PTPN7-214ENST00000491584 NKX1-1Q15270 411 aaPredicted RBP15.8■□□□□ 0.12
PTPN7-214ENST00000491584 AKAP4Q5JQC9 854 aa15.8■□□□□ 0.12
PTPN7-214ENST00000491584 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
PTPN7-214ENST00000491584 PNPLA7Q6ZV29 1317 aa15.79■□□□□ 0.12
PTPN7-214ENST00000491584 PHKG2P15735 406 aa15.79■□□□□ 0.12
PTPN7-214ENST00000491584 RTF1Q92541 710 aaKnown RBP15.79■□□□□ 0.12
PTPN7-214ENST00000491584 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
PTPN7-214ENST00000491584 ARXQ96QS3 562 aa15.79■□□□□ 0.12
PTPN7-214ENST00000491584 RSPH6AQ9H0K4 717 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms