RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 U2SURPO15042 1029 aaKnown RBP21.15■□□□□ 0.98
TRA2A-208ENST00000490942 FCHSD2O94868 740 aa21.15■□□□□ 0.98
TRA2A-208ENST00000490942 AMOTQ4VCS5 1084 aa21.15■□□□□ 0.98
TRA2A-208ENST00000490942 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.97
TRA2A-208ENST00000490942 ILDR2Q71H61 639 aa21.14■□□□□ 0.97
TRA2A-208ENST00000490942 AEBP1Q8IUX7 1158 aa21.14■□□□□ 0.97
TRA2A-208ENST00000490942 SPG7Q9UQ90 795 aa21.14■□□□□ 0.97
TRA2A-208ENST00000490942 PKD1L3Q7Z443 1732 aa21.13■□□□□ 0.97
TRA2A-208ENST00000490942 PCDH11XQ9BZA7 1347 aa21.13■□□□□ 0.97
TRA2A-208ENST00000490942 PCDH11YQ9BZA8 1340 aa21.13■□□□□ 0.97
TRA2A-208ENST00000490942 U2AF1L5P0DN76 240 aaPredicted RBP21.13■□□□□ 0.97
TRA2A-208ENST00000490942 U2AF1Q01081 240 aaKnown RBP eCLIP21.13■□□□□ 0.971e-7■■■□□ 15.2
TRA2A-208ENST00000490942 PNNQ9H307 717 aaKnown RBP21.13■□□□□ 0.97
TRA2A-208ENST00000490942 BRWD3Q6RI45 1802 aa21.13■□□□□ 0.97
TRA2A-208ENST00000490942 PLEKHO1Q53GL0 409 aaPredicted RBP21.12■□□□□ 0.97
TRA2A-208ENST00000490942 FAM196AQ6ZSG2 479 aa21.11■□□□□ 0.97
TRA2A-208ENST00000490942 RSPH6AQ9H0K4 717 aa21.11■□□□□ 0.97
TRA2A-208ENST00000490942 HMOX1P09601 288 aa21.1■□□□□ 0.97
TRA2A-208ENST00000490942 MARCH10Q8NA82 808 aaPredicted RBP21.1■□□□□ 0.97
TRA2A-208ENST00000490942 WDR43Q15061 677 aaKnown RBP eCLIP21.08■□□□□ 0.97
TRA2A-208ENST00000490942 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
TRA2A-208ENST00000490942 NKX1-1Q15270 411 aaPredicted RBP21.07■□□□□ 0.96
TRA2A-208ENST00000490942 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
TRA2A-208ENST00000490942 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
TRA2A-208ENST00000490942 HSP90AB1P08238 724 aaKnown RBP21.06■□□□□ 0.96
TRA2A-208ENST00000490942 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
TRA2A-208ENST00000490942 MRS2Q9HD23 443 aa21.06■□□□□ 0.96
TRA2A-208ENST00000490942 CYP27B1O15528 508 aa21.05■□□□□ 0.96
TRA2A-208ENST00000490942 NEFMP07197 916 aa21.05■□□□□ 0.96
TRA2A-208ENST00000490942 CCDC125Q86Z20 511 aa21.05■□□□□ 0.96
TRA2A-208ENST00000490942 GAS2L2Q8NHY3 880 aa21.05■□□□□ 0.96
TRA2A-208ENST00000490942 DDX54Q8TDD1 881 aaKnown RBP21.05■□□□□ 0.96
TRA2A-208ENST00000490942 PHKG2P15735 406 aa21.04■□□□□ 0.96
TRA2A-208ENST00000490942 PNISRQ8TF01 805 aaKnown RBP21.04■□□□□ 0.96
TRA2A-208ENST00000490942 PLEKHF1Q96S99 279 aa21.03■□□□□ 0.96
TRA2A-208ENST00000490942 CCDC184Q52MB2 194 aa21.02■□□□□ 0.96
TRA2A-208ENST00000490942 AKAP4Q5JQC9 854 aa21.02■□□□□ 0.96
TRA2A-208ENST00000490942 MTHFSDQ2M296 383 aaKnown RBP21.01■□□□□ 0.95
TRA2A-208ENST00000490942 C1orf141Q5JVX7 400 aa21.01■□□□□ 0.95
TRA2A-208ENST00000490942 ZNF530Q6P9A1 599 aaPredicted RBP21.01■□□□□ 0.95
TRA2A-208ENST00000490942 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
TRA2A-208ENST00000490942 DCAF5Q96JK2 942 aa21■□□□□ 0.95
TRA2A-208ENST00000490942 PHACTR3Q96KR7 559 aa20.99■□□□□ 0.95
TRA2A-208ENST00000490942 MAPK8IP3Q9UPT6 1336 aa20.99■□□□□ 0.95
TRA2A-208ENST00000490942 FAM182BQ5T319 152 aa20.98■□□□□ 0.95
TRA2A-208ENST00000490942 BCL11BQ9C0K0 894 aaPredicted RBP20.98■□□□□ 0.95
TRA2A-208ENST00000490942 HTATSF1O43719 755 aaKnown RBP20.97■□□□□ 0.95
TRA2A-208ENST00000490942 RUNDC1Q96C34 613 aa20.97■□□□□ 0.95
TRA2A-208ENST00000490942 ERVV-2B6SEH9 535 aa20.96■□□□□ 0.95
TRA2A-208ENST00000490942 UPF1Q92900 1129 aaKnown RBP eCLIP20.96■□□□□ 0.95
TRA2A-208ENST00000490942 MAP3K5Q99683 1374 aa20.96■□□□□ 0.95
TRA2A-208ENST00000490942 NHSQ6T4R5 1651 aa20.96■□□□□ 0.95
TRA2A-208ENST00000490942 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.94
TRA2A-208ENST00000490942 POTEDQ86YR6 584 aa20.95■□□□□ 0.94
TRA2A-208ENST00000490942 ADAMTS7Q9UKP4 1686 aa20.94■□□□□ 0.94
TRA2A-208ENST00000490942 SOCS7O14512 581 aa20.94■□□□□ 0.94
TRA2A-208ENST00000490942 MSH5O43196 834 aa20.94■□□□□ 0.94
TRA2A-208ENST00000490942 SBF2Q86WG5 1849 aa20.94■□□□□ 0.94
TRA2A-208ENST00000490942 TRIM37O94972 964 aa20.93■□□□□ 0.94
TRA2A-208ENST00000490942 NFE2L2Q16236 605 aa20.93■□□□□ 0.94
TRA2A-208ENST00000490942 KDM6AO15550 1401 aaPredicted RBP20.93■□□□□ 0.94
TRA2A-208ENST00000490942 SF3B2Q13435 895 aaKnown RBP20.92■□□□□ 0.94
TRA2A-208ENST00000490942 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
TRA2A-208ENST00000490942 MIER1Q8N108 512 aa20.92■□□□□ 0.94
TRA2A-208ENST00000490942 PRIM1P49642 420 aaKnown RBP20.91■□□□□ 0.94
TRA2A-208ENST00000490942 DOT1LQ8TEK3 1739 aa20.9■□□□□ 0.94
TRA2A-208ENST00000490942 MRC1P22897 1456 aa20.9■□□□□ 0.94
TRA2A-208ENST00000490942 CEMIPQ8WUJ3 1361 aa20.9■□□□□ 0.94
TRA2A-208ENST00000490942 LMOD3Q0VAK6 560 aa20.9■□□□□ 0.94
TRA2A-208ENST00000490942 MPRIPQ6WCQ1 1025 aa20.9■□□□□ 0.94
TRA2A-208ENST00000490942 PLSCR1O15162 318 aa20.89■□□□□ 0.93
TRA2A-208ENST00000490942 RNMTO43148 476 aaKnown RBP20.89■□□□□ 0.93
TRA2A-208ENST00000490942 KCNQ2O43526 872 aa20.89■□□□□ 0.93
TRA2A-208ENST00000490942 TMPOP42166 694 aaKnown RBP20.89■□□□□ 0.93
TRA2A-208ENST00000490942 RTF1Q92541 710 aaKnown RBP20.89■□□□□ 0.93
TRA2A-208ENST00000490942 ACSBG1Q96GR2 724 aa20.89■□□□□ 0.93
TRA2A-208ENST00000490942 TNS1Q9HBL0 1735 aaKnown RBP20.89■□□□□ 0.93
TRA2A-208ENST00000490942 TOGARAM1Q9Y4F4 1720 aa20.89■□□□□ 0.93
TRA2A-208ENST00000490942 SCN11AQ9UI33 1791 aa20.88■□□□□ 0.93
TRA2A-208ENST00000490942 BAG6P46379 1132 aa20.88■□□□□ 0.93
TRA2A-208ENST00000490942 TMOD3Q9NYL9 352 aa20.88■□□□□ 0.93
TRA2A-208ENST00000490942 CABP4P57796 275 aa20.87■□□□□ 0.93
TRA2A-208ENST00000490942 CCDC146Q8IYE0 955 aa20.87■□□□□ 0.93
TRA2A-208ENST00000490942 NGEFQ8N5V2 710 aa20.87■□□□□ 0.93
TRA2A-208ENST00000490942 IL17REQ8NFR9 667 aa20.87■□□□□ 0.93
TRA2A-208ENST00000490942 EP400Q96L91 3159 aa20.87■□□□□ 0.93
TRA2A-208ENST00000490942 RGPD3A6NKT7 1758 aaPredicted RBP20.87■□□□□ 0.93
TRA2A-208ENST00000490942 RGPD4Q7Z3J3 1758 aa20.87■□□□□ 0.93
TRA2A-208ENST00000490942 SYTL4Q96C24 671 aaPredicted RBP20.86■□□□□ 0.93
TRA2A-208ENST00000490942 SLC52A2Q9HAB3 445 aa20.86■□□□□ 0.93
TRA2A-208ENST00000490942 APBA3O96018 575 aa20.85■□□□□ 0.93
TRA2A-208ENST00000490942 HMGB2P26583 209 aaKnown RBP20.85■□□□□ 0.93
TRA2A-208ENST00000490942 RIPK4P57078 832 aa20.85■□□□□ 0.93
TRA2A-208ENST00000490942 PIGBQ92521 554 aa20.85■□□□□ 0.93
TRA2A-208ENST00000490942 SMARCC1Q92922 1105 aaPredicted RBP20.85■□□□□ 0.93
TRA2A-208ENST00000490942 LGR6Q9HBX8 967 aa20.85■□□□□ 0.93
TRA2A-208ENST00000490942 FAM9BQ8IZU0 186 aa20.84■□□□□ 0.93
TRA2A-208ENST00000490942 ITGB4P16144 1822 aa20.83■□□□□ 0.93
TRA2A-208ENST00000490942 APAF1O14727 1248 aa20.83■□□□□ 0.93
TRA2A-208ENST00000490942 TEFQ10587 303 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms