RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 C5P01031 1676 aa19.92■□□□□ 0.78
EXOSC3-207ENST00000490516 TOMM70O94826 608 aa19.92■□□□□ 0.78
EXOSC3-207ENST00000490516 PRELPP51888 382 aa19.92■□□□□ 0.78
EXOSC3-207ENST00000490516 TNS4Q8IZW8 715 aa19.92■□□□□ 0.78
EXOSC3-207ENST00000490516 ANKRD24Q8TF21 1146 aa19.92■□□□□ 0.78
EXOSC3-207ENST00000490516 IGSF1Q8N6C5 1336 aa19.92■□□□□ 0.78
EXOSC3-207ENST00000490516 ANKRD36BQ8N2N9 1353 aa19.92■□□□□ 0.78
EXOSC3-207ENST00000490516 HTRA3P83110 453 aa19.91■□□□□ 0.78
EXOSC3-207ENST00000490516 ZNF692Q9BU19 519 aaPredicted RBP19.91■□□□□ 0.78
EXOSC3-207ENST00000490516 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
EXOSC3-207ENST00000490516 TAF1LQ8IZX4 1826 aa19.89■□□□□ 0.77
EXOSC3-207ENST00000490516 USP54Q70EL1 1684 aa19.88■□□□□ 0.77
EXOSC3-207ENST00000490516 KLRG1Q96E93 195 aa19.88■□□□□ 0.77
EXOSC3-207ENST00000490516 MON2Q7Z3U7 1717 aa19.88■□□□□ 0.77
EXOSC3-207ENST00000490516 JMYQ8N9B5 988 aa19.87■□□□□ 0.77
EXOSC3-207ENST00000490516 CICQ96RK0 1608 aaPredicted RBP19.87■□□□□ 0.77
EXOSC3-207ENST00000490516 KTN1Q86UP2 1357 aaKnown RBP19.86■□□□□ 0.77
EXOSC3-207ENST00000490516 EVC2Q86UK5 1308 aa19.86■□□□□ 0.77
EXOSC3-207ENST00000490516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.85■□□□□ 0.77
EXOSC3-207ENST00000490516 NMRK2Q9NPI5 230 aa19.85■□□□□ 0.77
EXOSC3-207ENST00000490516 FAM208AQ9UK61 1670 aaKnown RBP19.84■□□□□ 0.77
EXOSC3-207ENST00000490516 PCNTO95613 3336 aa19.84■□□□□ 0.77
EXOSC3-207ENST00000490516 USP47Q96K76 1375 aa19.83■□□□□ 0.77
EXOSC3-207ENST00000490516 RGPD2P0DJD1 1756 aa19.83■□□□□ 0.77
EXOSC3-207ENST00000490516 USP31Q70CQ4 1352 aa19.83■□□□□ 0.76
EXOSC3-207ENST00000490516 TOGARAM1Q9Y4F4 1720 aa19.82■□□□□ 0.76
EXOSC3-207ENST00000490516 NME9Q86XW9 330 aa19.82■□□□□ 0.76
EXOSC3-207ENST00000490516 FLAD1Q8NFF5 587 aa19.81■□□□□ 0.76
EXOSC3-207ENST00000490516 LTV1Q96GA3 475 aaPredicted RBP19.81■□□□□ 0.76
EXOSC3-207ENST00000490516 UBR3Q6ZT12 1888 aa19.8■□□□□ 0.76
EXOSC3-207ENST00000490516 AMIGO3Q86WK7 504 aa19.8■□□□□ 0.76
EXOSC3-207ENST00000490516 N4BP2Q86UW6 1770 aaPredicted RBP19.8■□□□□ 0.76
EXOSC3-207ENST00000490516 C4BP0C0L5 1744 aa19.79■□□□□ 0.76
EXOSC3-207ENST00000490516 SMIM5Q71RC9 77 aa19.79■□□□□ 0.76
EXOSC3-207ENST00000490516 RBM46Q8TBY0 533 aaKnown RBP19.79■□□□□ 0.76
EXOSC3-207ENST00000490516 ZCRB1Q8TBF4 217 aaKnown RBP19.78■□□□□ 0.76
EXOSC3-207ENST00000490516 KIAA1551Q9HCM1 1747 aa19.78■□□□□ 0.76
EXOSC3-207ENST00000490516 PHF14O94880 888 aa19.76■□□□□ 0.75
EXOSC3-207ENST00000490516 MEGF6O75095 1541 aa19.76■□□□□ 0.75
EXOSC3-207ENST00000490516 KIF13BQ9NQT8 1826 aa19.74■□□□□ 0.75
EXOSC3-207ENST00000490516 SBNO2Q9Y2G9 1366 aa19.74■□□□□ 0.75
EXOSC3-207ENST00000490516 C16orf71Q8IYS4 520 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-207ENST00000490516 IP6K1Q92551 441 aa19.74■□□□□ 0.75
EXOSC3-207ENST00000490516 AK7Q96M32 723 aa19.73■□□□□ 0.75
EXOSC3-207ENST00000490516 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
EXOSC3-207ENST00000490516 PALLDQ8WX93 1383 aa19.72■□□□□ 0.75
EXOSC3-207ENST00000490516 SLC34A2O95436 690 aa19.72■□□□□ 0.75
EXOSC3-207ENST00000490516 FSTL1Q12841 308 aa19.72■□□□□ 0.75
EXOSC3-207ENST00000490516 BCS1LQ9Y276 419 aa19.72■□□□□ 0.75
EXOSC3-207ENST00000490516 CD163L1Q9NR16 1453 aa19.72■□□□□ 0.75
EXOSC3-207ENST00000490516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
EXOSC3-207ENST00000490516 ARHGAP27Q6ZUM4 889 aa19.71■□□□□ 0.75
EXOSC3-207ENST00000490516 PKD1L3Q7Z443 1732 aa19.71■□□□□ 0.75
EXOSC3-207ENST00000490516 ITGB4P16144 1822 aa19.7■□□□□ 0.74
EXOSC3-207ENST00000490516 BRCA1P38398 1863 aaKnown RBP19.69■□□□□ 0.74
EXOSC3-207ENST00000490516 KCPQ6ZWJ8 1503 aa19.68■□□□□ 0.74
EXOSC3-207ENST00000490516 HSPA1AP0DMV8 641 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-207ENST00000490516 HSPA1BP0DMV9 641 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-207ENST00000490516 A0A0G2JLW4 131 aa19.67■□□□□ 0.74
EXOSC3-207ENST00000490516 MPRIPQ6WCQ1 1025 aa19.67■□□□□ 0.74
EXOSC3-207ENST00000490516 HMGB2P26583 209 aaKnown RBP19.66■□□□□ 0.74
EXOSC3-207ENST00000490516 C9orf131Q5VYM1 1079 aa19.66■□□□□ 0.74
EXOSC3-207ENST00000490516 RRAGCQ9HB90 399 aa19.65■□□□□ 0.74
EXOSC3-207ENST00000490516 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
EXOSC3-207ENST00000490516 TNRC6CQ9HCJ0 1690 aaKnown RBP19.65■□□□□ 0.74
EXOSC3-207ENST00000490516 MAP2P11137 1827 aaKnown RBP19.65■□□□□ 0.74
EXOSC3-207ENST00000490516 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
EXOSC3-207ENST00000490516 MMP10P09238 476 aa19.64■□□□□ 0.73
EXOSC3-207ENST00000490516 SSFA2P28290 1259 aa19.64■□□□□ 0.73
EXOSC3-207ENST00000490516 HOXC9P31274 260 aa19.64■□□□□ 0.73
EXOSC3-207ENST00000490516 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
EXOSC3-207ENST00000490516 EDC4Q6P2E9 1401 aaKnown RBP19.64■□□□□ 0.73
EXOSC3-207ENST00000490516 MAP3K19Q56UN5 1328 aa19.63■□□□□ 0.73
EXOSC3-207ENST00000490516 FBLN1P23142 703 aa19.63■□□□□ 0.73
EXOSC3-207ENST00000490516 TGFB2P61812 414 aa19.63■□□□□ 0.73
EXOSC3-207ENST00000490516 TMC1Q8TDI8 760 aa19.63■□□□□ 0.73
EXOSC3-207ENST00000490516 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
EXOSC3-207ENST00000490516 FCHSD2O94868 740 aa19.62■□□□□ 0.73
EXOSC3-207ENST00000490516 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
EXOSC3-207ENST00000490516 LINC00116Q8NCU8 138 aa19.62■□□□□ 0.73
EXOSC3-207ENST00000490516 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
EXOSC3-207ENST00000490516 KDM2BQ8NHM5 1336 aa19.61■□□□□ 0.73
EXOSC3-207ENST00000490516 DPEP1P16444 411 aa19.61■□□□□ 0.73
EXOSC3-207ENST00000490516 HDGFL2Q7Z4V5 671 aaPredicted RBP19.61■□□□□ 0.73
EXOSC3-207ENST00000490516 SLC12A5Q9H2X9 1139 aa19.61■□□□□ 0.73
EXOSC3-207ENST00000490516 SBF1O95248 1867 aa19.6■□□□□ 0.73
EXOSC3-207ENST00000490516 C10orf71Q711Q0 1435 aa19.6■□□□□ 0.73
EXOSC3-207ENST00000490516 AMPHP49418 695 aa19.6■□□□□ 0.73
EXOSC3-207ENST00000490516 SMC1BQ8NDV3 1235 aa19.6■□□□□ 0.73
EXOSC3-207ENST00000490516 SMARCC1Q92922 1105 aaPredicted RBP19.6■□□□□ 0.73
EXOSC3-207ENST00000490516 CGNL1Q0VF96 1302 aa19.59■□□□□ 0.73
EXOSC3-207ENST00000490516 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
EXOSC3-207ENST00000490516 PCDH11XQ9BZA7 1347 aa19.58■□□□□ 0.73
EXOSC3-207ENST00000490516 PCDH11YQ9BZA8 1340 aa19.58■□□□□ 0.73
EXOSC3-207ENST00000490516 GNPATO15228 680 aa19.58■□□□□ 0.72
EXOSC3-207ENST00000490516 A0A1W2PP64 1363 aa19.57■□□□□ 0.72
EXOSC3-207ENST00000490516 RNF181Q9P0P0 153 aa19.57■□□□□ 0.72
EXOSC3-207ENST00000490516 ROCK2O75116 1388 aaKnown RBP19.57■□□□□ 0.72
EXOSC3-207ENST00000490516 CYP27B1O15528 508 aa19.56■□□□□ 0.72
EXOSC3-207ENST00000490516 TATP17735 454 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms