RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 NBPF4Q96M43 638 aa21.87■■□□□ 1.09
NUP58-213ENST00000490231 KIF24Q5T7B8 1368 aa21.87■■□□□ 1.09
NUP58-213ENST00000490231 PRIM1P49642 420 aaKnown RBP21.86■■□□□ 1.09
NUP58-213ENST00000490231 SYTL4Q96C24 671 aaPredicted RBP21.85■■□□□ 1.09
NUP58-213ENST00000490231 SYT17Q9BSW7 474 aa21.85■■□□□ 1.09
NUP58-213ENST00000490231 FHDC1Q9C0D6 1143 aaPredicted RBP21.85■■□□□ 1.09
NUP58-213ENST00000490231 NSD2O96028 1365 aa21.85■■□□□ 1.09
NUP58-213ENST00000490231 INSRP06213 1382 aa21.85■■□□□ 1.09
NUP58-213ENST00000490231 RAPGEF4Q8WZA2 1011 aa21.83■■□□□ 1.09
NUP58-213ENST00000490231 ARXQ96QS3 562 aa21.83■■□□□ 1.09
NUP58-213ENST00000490231 FLT4P35916 1363 aa21.83■■□□□ 1.08
NUP58-213ENST00000490231 SHANK3Q9BYB0 1731 aa21.83■■□□□ 1.08
NUP58-213ENST00000490231 RGPD2P0DJD1 1756 aa21.82■■□□□ 1.08
NUP58-213ENST00000490231 HSP90AB2PQ58FF8 381 aa21.82■■□□□ 1.08
NUP58-213ENST00000490231 USHBP1Q8N6Y0 703 aa21.82■■□□□ 1.08
NUP58-213ENST00000490231 SLC16A10Q8TF71 515 aa21.82■■□□□ 1.08
NUP58-213ENST00000490231 DOT1LQ8TEK3 1739 aa21.82■■□□□ 1.08
NUP58-213ENST00000490231 CARD14Q9BXL6 1004 aa21.81■■□□□ 1.08
NUP58-213ENST00000490231 MAP3K5Q99683 1374 aa21.81■■□□□ 1.08
NUP58-213ENST00000490231 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
NUP58-213ENST00000490231 KIF20BQ96Q89 1820 aa21.8■■□□□ 1.08
NUP58-213ENST00000490231 TATP17735 454 aaPredicted RBP21.8■■□□□ 1.08
NUP58-213ENST00000490231 NSD3Q9BZ95 1437 aa21.8■■□□□ 1.08
NUP58-213ENST00000490231 PNPLA7Q6ZV29 1317 aa21.8■■□□□ 1.08
NUP58-213ENST00000490231 QSER1Q2KHR3 1735 aa21.78■■□□□ 1.08
NUP58-213ENST00000490231 TFCP2L1Q9NZI6 479 aa21.78■■□□□ 1.08
NUP58-213ENST00000490231 PCDH11XQ9BZA7 1347 aa21.78■■□□□ 1.08
NUP58-213ENST00000490231 PCDH11YQ9BZA8 1340 aa21.78■■□□□ 1.08
NUP58-213ENST00000490231 KCNQ4P56696 695 aa21.77■■□□□ 1.08
NUP58-213ENST00000490231 CCNL1Q9UK58 526 aaPredicted RBP21.77■■□□□ 1.08
NUP58-213ENST00000490231 LY75O60449 1722 aa21.77■■□□□ 1.08
NUP58-213ENST00000490231 EMILIN1Q9Y6C2 1016 aa21.75■■□□□ 1.07
NUP58-213ENST00000490231 POLD1P28340 1107 aa21.74■■□□□ 1.07
NUP58-213ENST00000490231 KAT6BQ8WYB5 2073 aa21.74■■□□□ 1.07
NUP58-213ENST00000490231 NCAPD2Q15021 1401 aa21.72■■□□□ 1.07
NUP58-213ENST00000490231 HMGB2P26583 209 aaKnown RBP21.72■■□□□ 1.07
NUP58-213ENST00000490231 COL24A1Q17RW2 1714 aa21.72■■□□□ 1.07
NUP58-213ENST00000490231 CYP27B1O15528 508 aa21.71■■□□□ 1.07
NUP58-213ENST00000490231 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
NUP58-213ENST00000490231 ANKRD26Q9UPS8 1709 aa21.69■■□□□ 1.06
NUP58-213ENST00000490231 TUBGCP6Q96RT7 1819 aa21.69■■□□□ 1.06
NUP58-213ENST00000490231 PPM1GO15355 546 aaPredicted RBP21.68■■□□□ 1.06
NUP58-213ENST00000490231 PCGF6Q9BYE7 350 aa21.68■■□□□ 1.06
NUP58-213ENST00000490231 PALLDQ8WX93 1383 aa21.67■■□□□ 1.06
NUP58-213ENST00000490231 NKX1-1Q15270 411 aaPredicted RBP21.67■■□□□ 1.06
NUP58-213ENST00000490231 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
NUP58-213ENST00000490231 PKD1L3Q7Z443 1732 aa21.66■■□□□ 1.06
NUP58-213ENST00000490231 COL23A1Q86Y22 540 aaPredicted RBP21.66■■□□□ 1.06
NUP58-213ENST00000490231 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
NUP58-213ENST00000490231 SPG7Q9UQ90 795 aa21.66■■□□□ 1.06
NUP58-213ENST00000490231 ZNF784Q8NCA9 323 aaPredicted RBP21.65■■□□□ 1.06
NUP58-213ENST00000490231 SMARCC1Q92922 1105 aaPredicted RBP21.65■■□□□ 1.06
NUP58-213ENST00000490231 EYA1Q99502 592 aa21.65■■□□□ 1.06
NUP58-213ENST00000490231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.65■■□□□ 1.06
NUP58-213ENST00000490231 UTRNP46939 3433 aa21.65■■□□□ 1.06
NUP58-213ENST00000490231 MSH5O43196 834 aa21.64■■□□□ 1.05
NUP58-213ENST00000490231 GPR162Q16538 588 aa21.64■■□□□ 1.05
NUP58-213ENST00000490231 KLHL34Q8N239 644 aa21.64■■□□□ 1.05
NUP58-213ENST00000490231 C5P01031 1676 aa21.63■■□□□ 1.05
NUP58-213ENST00000490231 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
NUP58-213ENST00000490231 TOGARAM1Q9Y4F4 1720 aa21.63■■□□□ 1.05
NUP58-213ENST00000490231 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.05
NUP58-213ENST00000490231 POLR3GLQ9BT43 218 aa21.62■■□□□ 1.05
NUP58-213ENST00000490231 PIGBQ92521 554 aa21.61■■□□□ 1.05
NUP58-213ENST00000490231 PLEKHG2Q9H7P9 1386 aa21.61■■□□□ 1.05
NUP58-213ENST00000490231 NLGN2Q8NFZ4 835 aa21.6■■□□□ 1.05
NUP58-213ENST00000490231 HSPA5P11021 654 aaKnown RBP21.58■■□□□ 1.05
NUP58-213ENST00000490231 EIF4A2Q14240 407 aaKnown RBP21.58■■□□□ 1.05
NUP58-213ENST00000490231 IFNL2Q8IZJ0 200 aa21.58■■□□□ 1.05
NUP58-213ENST00000490231 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
NUP58-213ENST00000490231 PHKG2P15735 406 aa21.57■■□□□ 1.04
NUP58-213ENST00000490231 TNNT2P45379 298 aaPredicted RBP21.57■■□□□ 1.04
NUP58-213ENST00000490231 MSL1Q68DK7 614 aa21.57■■□□□ 1.04
NUP58-213ENST00000490231 AK7Q96M32 723 aa21.57■■□□□ 1.04
NUP58-213ENST00000490231 ITGB4P16144 1822 aa21.57■■□□□ 1.04
NUP58-213ENST00000490231 C4BP0C0L5 1744 aa21.56■■□□□ 1.04
NUP58-213ENST00000490231 TMOD3Q9NYL9 352 aa21.56■■□□□ 1.04
NUP58-213ENST00000490231 TAF1LQ8IZX4 1826 aa21.56■■□□□ 1.04
NUP58-213ENST00000490231 CHD4Q14839 1912 aa21.55■■□□□ 1.04
NUP58-213ENST00000490231 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
NUP58-213ENST00000490231 SIK1P57059 783 aa21.55■■□□□ 1.04
NUP58-213ENST00000490231 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
NUP58-213ENST00000490231 PANK3Q9H999 370 aa21.55■■□□□ 1.04
NUP58-213ENST00000490231 IGSF1Q8N6C5 1336 aa21.55■■□□□ 1.04
NUP58-213ENST00000490231 CD2APQ9Y5K6 639 aa21.53■■□□□ 1.04
NUP58-213ENST00000490231 GRIN3BO60391 1043 aa21.52■■□□□ 1.04
NUP58-213ENST00000490231 SSFA2P28290 1259 aa21.52■■□□□ 1.04
NUP58-213ENST00000490231 AMIGO3Q86WK7 504 aa21.52■■□□□ 1.04
NUP58-213ENST00000490231 ASAP1Q9ULH1 1129 aa21.52■■□□□ 1.04
NUP58-213ENST00000490231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.51■■□□□ 1.03
NUP58-213ENST00000490231 LINC00116Q8NCU8 138 aa21.51■■□□□ 1.03
NUP58-213ENST00000490231 PHF14O94880 888 aa21.5■■□□□ 1.03
NUP58-213ENST00000490231 YBX3P16989 372 aaKnown RBP eCLIP21.5■■□□□ 1.03
NUP58-213ENST00000490231 ATP6V1AP38606 617 aa21.49■■□□□ 1.03
NUP58-213ENST00000490231 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
NUP58-213ENST00000490231 ATG3Q9NT62 314 aa21.49■■□□□ 1.03
NUP58-213ENST00000490231 ERVV-2B6SEH9 535 aa21.48■■□□□ 1.03
NUP58-213ENST00000490231 HSP90AB1P08238 724 aaKnown RBP21.48■■□□□ 1.03
NUP58-213ENST00000490231 ITPK1Q13572 414 aa21.48■■□□□ 1.03
NUP58-213ENST00000490231 UBR3Q6ZT12 1888 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms