RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 KCNQ2O43526 872 aa27.12■■□□□ 1.93
SMC4-222ENST00000490207 DDX54Q8TDD1 881 aaKnown RBP27.12■■□□□ 1.93
SMC4-222ENST00000490207 TNNT2P45379 298 aaPredicted RBP27.11■■□□□ 1.93
SMC4-222ENST00000490207 NBPF14Q5TI25 921 aa27.11■■□□□ 1.93
SMC4-222ENST00000490207 RAPGEF4Q8WZA2 1011 aa27.11■■□□□ 1.93
SMC4-222ENST00000490207 POLKQ9UBT6 870 aa27.11■■□□□ 1.93
SMC4-222ENST00000490207 SRCAPQ6ZRS2 3230 aa27.11■■□□□ 1.93
SMC4-222ENST00000490207 WASHC2AQ641Q2 1341 aa27.11■■□□□ 1.93
SMC4-222ENST00000490207 PKD1L3Q7Z443 1732 aa27.1■■□□□ 1.93
SMC4-222ENST00000490207 NCAPD2Q15021 1401 aa27.1■■□□□ 1.93
SMC4-222ENST00000490207 ZCRB1Q8TBF4 217 aaKnown RBP27.1■■□□□ 1.93
SMC4-222ENST00000490207 KNSTRNQ9Y448 316 aa27.09■■□□□ 1.93
SMC4-222ENST00000490207 TATP17735 454 aaPredicted RBP27.08■■□□□ 1.93
SMC4-222ENST00000490207 MORC1Q86VD1 984 aa27.04■■□□□ 1.92
SMC4-222ENST00000490207 TXNRD1Q16881 649 aa27.03■■□□□ 1.92
SMC4-222ENST00000490207 PROM2Q8N271 834 aa27.03■■□□□ 1.92
SMC4-222ENST00000490207 PCDH11XQ9BZA7 1347 aa27.02■■□□□ 1.92
SMC4-222ENST00000490207 PCDH11YQ9BZA8 1340 aa27.02■■□□□ 1.92
SMC4-222ENST00000490207 ANO8Q9HCE9 1232 aaPredicted RBP27.02■■□□□ 1.92
SMC4-222ENST00000490207 PAPPAQ13219 1627 aa27.01■■□□□ 1.92
SMC4-222ENST00000490207 CASZ1Q86V15 1759 aa27■■□□□ 1.91
SMC4-222ENST00000490207 EIF4A2Q14240 407 aaKnown RBP27■■□□□ 1.91
SMC4-222ENST00000490207 AMER1Q5JTC6 1135 aaPredicted RBP27■■□□□ 1.91
SMC4-222ENST00000490207 EYA1Q99502 592 aa27■■□□□ 1.91
SMC4-222ENST00000490207 TOGARAM1Q9Y4F4 1720 aa26.99■■□□□ 1.91
SMC4-222ENST00000490207 SYTL4Q96C24 671 aaPredicted RBP26.99■■□□□ 1.91
SMC4-222ENST00000490207 LY75O60449 1722 aa26.99■■□□□ 1.91
SMC4-222ENST00000490207 PRIM1P49642 420 aaKnown RBP26.96■■□□□ 1.91
SMC4-222ENST00000490207 ITGB4P16144 1822 aa26.95■■□□□ 1.9
SMC4-222ENST00000490207 STK32BQ9NY57 414 aa26.94■■□□□ 1.9
SMC4-222ENST00000490207 IGSF1Q8N6C5 1336 aa26.93■■□□□ 1.9
SMC4-222ENST00000490207 CYP27B1O15528 508 aa26.92■■□□□ 1.9
SMC4-222ENST00000490207 PER1O15534 1290 aaPredicted RBP26.92■■□□□ 1.9
SMC4-222ENST00000490207 SPG7Q9UQ90 795 aa26.92■■□□□ 1.9
SMC4-222ENST00000490207 PLEKHG2Q9H7P9 1386 aa26.91■■□□□ 1.9
SMC4-222ENST00000490207 SLC15A2Q16348 729 aa26.9■■□□□ 1.9
SMC4-222ENST00000490207 CC2D1BQ5T0F9 858 aaKnown RBP26.89■■□□□ 1.9
SMC4-222ENST00000490207 QSER1Q2KHR3 1735 aa26.88■■□□□ 1.89
SMC4-222ENST00000490207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.88■■□□□ 1.892e-7■■■■□ 21.8
SMC4-222ENST00000490207 NPC1L1Q9UHC9 1359 aa26.87■■□□□ 1.89
SMC4-222ENST00000490207 SLC27A3Q5K4L6 730 aa26.87■■□□□ 1.89
SMC4-222ENST00000490207 LRRC4BQ9NT99 713 aa26.87■■□□□ 1.89
SMC4-222ENST00000490207 TUBGCP6Q96RT7 1819 aa26.86■■□□□ 1.89
SMC4-222ENST00000490207 SPON1Q9HCB6 807 aa26.84■■□□□ 1.89
SMC4-222ENST00000490207 C5P01031 1676 aa26.83■■□□□ 1.89
SMC4-222ENST00000490207 NKX1-1Q15270 411 aaPredicted RBP26.83■■□□□ 1.89
SMC4-222ENST00000490207 PDGFDQ9GZP0 370 aaPredicted RBP26.83■■□□□ 1.89
SMC4-222ENST00000490207 ZNF827Q17R98 1081 aa26.82■■□□□ 1.88
SMC4-222ENST00000490207 IFNL2Q8IZJ0 200 aa26.82■■□□□ 1.88
SMC4-222ENST00000490207 PHKG2P15735 406 aa26.81■■□□□ 1.88
SMC4-222ENST00000490207 MTHFSP49914 203 aa26.81■■□□□ 1.88
SMC4-222ENST00000490207 MPRIPQ6WCQ1 1025 aa26.81■■□□□ 1.88
SMC4-222ENST00000490207 IL13P35225 146 aa26.8■■□□□ 1.88
SMC4-222ENST00000490207 AEBP1Q8IUX7 1158 aa26.8■■□□□ 1.88
SMC4-222ENST00000490207 CCNL1Q9UK58 526 aaPredicted RBP26.8■■□□□ 1.88
SMC4-222ENST00000490207 TAF1LQ8IZX4 1826 aa26.8■■□□□ 1.88
SMC4-222ENST00000490207 KCNQ4P56696 695 aa26.79■■□□□ 1.88
SMC4-222ENST00000490207 CNGB1Q14028 1251 aaPredicted RBP26.79■■□□□ 1.88
SMC4-222ENST00000490207 KDRP35968 1356 aa26.79■■□□□ 1.88
SMC4-222ENST00000490207 PALLDQ8WX93 1383 aa26.79■■□□□ 1.88
SMC4-222ENST00000490207 AKT1S1Q96B36 256 aa26.78■■□□□ 1.88
SMC4-222ENST00000490207 ZBTB7AO95365 584 aa26.77■■□□□ 1.88
SMC4-222ENST00000490207 PLEKHO1Q53GL0 409 aaPredicted RBP26.77■■□□□ 1.88
SMC4-222ENST00000490207 SULT6B1Q6IMI4 303 aa26.77■■□□□ 1.88
SMC4-222ENST00000490207 COL3A1P02461 1466 aaPredicted RBP26.75■■□□□ 1.87
SMC4-222ENST00000490207 AMOTQ4VCS5 1084 aa26.75■■□□□ 1.87
SMC4-222ENST00000490207 PPP1R1BQ9UD71 204 aaPredicted RBP26.75■■□□□ 1.87
SMC4-222ENST00000490207 ZNF530Q6P9A1 599 aaPredicted RBP26.74■■□□□ 1.87
SMC4-222ENST00000490207 PIGBQ92521 554 aa26.74■■□□□ 1.87
SMC4-222ENST00000490207 SMARCC1Q92922 1105 aaPredicted RBP26.74■■□□□ 1.87
SMC4-222ENST00000490207 TMOD3Q9NYL9 352 aa26.74■■□□□ 1.87
SMC4-222ENST00000490207 MTFR1LQ9H019 292 aa26.72■■□□□ 1.87
SMC4-222ENST00000490207 C4BP0C0L5 1744 aa26.71■■□□□ 1.87
SMC4-222ENST00000490207 DIAPH1O60610 1272 aaKnown RBP26.71■■□□□ 1.87
SMC4-222ENST00000490207 HSP90AB1P08238 724 aaKnown RBP26.71■■□□□ 1.87
SMC4-222ENST00000490207 ATF5Q9Y2D1 282 aaPredicted RBP26.71■■□□□ 1.87
SMC4-222ENST00000490207 KDM6AO15550 1401 aaPredicted RBP26.71■■□□□ 1.87
SMC4-222ENST00000490207 PNPLA7Q6ZV29 1317 aa26.7■■□□□ 1.87
SMC4-222ENST00000490207 TFCP2L1Q9NZI6 479 aa26.7■■□□□ 1.86
SMC4-222ENST00000490207 SCN11AQ9UI33 1791 aa26.7■■□□□ 1.86
SMC4-222ENST00000490207 VIRMAQ69YN4 1812 aaKnown RBP26.69■■□□□ 1.86
SMC4-222ENST00000490207 COL24A1Q17RW2 1714 aa26.68■■□□□ 1.86
SMC4-222ENST00000490207 PTGER2P43116 358 aa26.68■■□□□ 1.86
SMC4-222ENST00000490207 C1orf141Q5JVX7 400 aa26.68■■□□□ 1.86
SMC4-222ENST00000490207 DCAF5Q96JK2 942 aa26.68■■□□□ 1.86
SMC4-222ENST00000490207 HMOX1P09601 288 aa26.67■■□□□ 1.86
SMC4-222ENST00000490207 ERVV-2B6SEH9 535 aa26.66■■□□□ 1.86
SMC4-222ENST00000490207 HMGB2P26583 209 aaKnown RBP26.66■■□□□ 1.86
SMC4-222ENST00000490207 UBR3Q6ZT12 1888 aa26.64■■□□□ 1.86
SMC4-222ENST00000490207 ASAP1Q9ULH1 1129 aa26.64■■□□□ 1.86
SMC4-222ENST00000490207 ZNF831Q5JPB2 1677 aa26.63■■□□□ 1.85
SMC4-222ENST00000490207 SLC16A10Q8TF71 515 aa26.63■■□□□ 1.85
SMC4-222ENST00000490207 LOC102724428A0A0B4J2F2 783 aa26.62■■□□□ 1.85
SMC4-222ENST00000490207 SIK1P57059 783 aa26.62■■□□□ 1.85
SMC4-222ENST00000490207 SGIP1Q9BQI5 828 aa26.62■■□□□ 1.85
SMC4-222ENST00000490207 ATG3Q9NT62 314 aa26.62■■□□□ 1.85
SMC4-222ENST00000490207 U2SURPO15042 1029 aaKnown RBP26.6■■□□□ 1.85
SMC4-222ENST00000490207 CABP4P57796 275 aa26.6■■□□□ 1.85
SMC4-222ENST00000490207 CFAP53Q96M91 514 aa26.6■■□□□ 1.85
SMC4-222ENST00000490207 ADAMTS7Q9UKP4 1686 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms