RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 NSD2O96028 1365 aa22.26■■□□□ 1.15
PLOD3-216ENST00000489927 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
PLOD3-216ENST00000489927 SHANK3Q9BYB0 1731 aa22.26■■□□□ 1.15
PLOD3-216ENST00000489927 GGNBP2Q9H3C7 697 aa22.26■■□□□ 1.15
PLOD3-216ENST00000489927 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
PLOD3-216ENST00000489927 TMF1P82094 1093 aa22.25■■□□□ 1.15
PLOD3-216ENST00000489927 NBPF6Q5VWK0 638 aa22.25■■□□□ 1.15
PLOD3-216ENST00000489927 NBPF4Q96M43 638 aa22.25■■□□□ 1.15
PLOD3-216ENST00000489927 PNPLA7Q6ZV29 1317 aa22.25■■□□□ 1.15
PLOD3-216ENST00000489927 USP47Q96K76 1375 aa22.25■■□□□ 1.15
PLOD3-216ENST00000489927 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
PLOD3-216ENST00000489927 SLC16A10Q8TF71 515 aa22.23■■□□□ 1.15
PLOD3-216ENST00000489927 TFCP2L1Q9NZI6 479 aa22.23■■□□□ 1.15
PLOD3-216ENST00000489927 QSER1Q2KHR3 1735 aa22.23■■□□□ 1.15
PLOD3-216ENST00000489927 LY75O60449 1722 aa22.22■■□□□ 1.15
PLOD3-216ENST00000489927 ZNF784Q8NCA9 323 aaPredicted RBP22.21■■□□□ 1.15
PLOD3-216ENST00000489927 SMG6Q86US8 1419 aaKnown RBP22.21■■□□□ 1.15
PLOD3-216ENST00000489927 CGNL1Q0VF96 1302 aa22.2■■□□□ 1.14
PLOD3-216ENST00000489927 POLD1P28340 1107 aa22.19■■□□□ 1.14
PLOD3-216ENST00000489927 HSP90AB2PQ58FF8 381 aa22.19■■□□□ 1.14
PLOD3-216ENST00000489927 RAPGEF4Q8WZA2 1011 aa22.19■■□□□ 1.14
PLOD3-216ENST00000489927 CCNL1Q9UK58 526 aaPredicted RBP22.19■■□□□ 1.14
PLOD3-216ENST00000489927 TUBGCP6Q96RT7 1819 aa22.19■■□□□ 1.14
PLOD3-216ENST00000489927 KLHL34Q8N239 644 aa22.18■■□□□ 1.14
PLOD3-216ENST00000489927 GOLGB1Q14789 3259 aaKnown RBP22.18■■□□□ 1.14
PLOD3-216ENST00000489927 COL24A1Q17RW2 1714 aa22.17■■□□□ 1.14
PLOD3-216ENST00000489927 INSRP06213 1382 aa22.17■■□□□ 1.14
PLOD3-216ENST00000489927 FLT4P35916 1363 aa22.16■■□□□ 1.14
PLOD3-216ENST00000489927 TATP17735 454 aaPredicted RBP22.16■■□□□ 1.14
PLOD3-216ENST00000489927 KIF20BQ96Q89 1820 aa22.15■■□□□ 1.14
PLOD3-216ENST00000489927 GPR162Q16538 588 aa22.15■■□□□ 1.14
PLOD3-216ENST00000489927 CDCA8Q53HL2 280 aa22.15■■□□□ 1.14
PLOD3-216ENST00000489927 KIF24Q5T7B8 1368 aa22.13■■□□□ 1.13
PLOD3-216ENST00000489927 PCDH11XQ9BZA7 1347 aa22.13■■□□□ 1.13
PLOD3-216ENST00000489927 PCDH11YQ9BZA8 1340 aa22.13■■□□□ 1.13
PLOD3-216ENST00000489927 CARD14Q9BXL6 1004 aa22.13■■□□□ 1.13
PLOD3-216ENST00000489927 CHD4Q14839 1912 aa22.12■■□□□ 1.13
PLOD3-216ENST00000489927 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
PLOD3-216ENST00000489927 MSH5O43196 834 aa22.11■■□□□ 1.13
PLOD3-216ENST00000489927 COL23A1Q86Y22 540 aaPredicted RBP22.11■■□□□ 1.13
PLOD3-216ENST00000489927 NLGN2Q8NFZ4 835 aa22.11■■□□□ 1.13
PLOD3-216ENST00000489927 EMILIN1Q9Y6C2 1016 aa22.11■■□□□ 1.13
PLOD3-216ENST00000489927 NSD3Q9BZ95 1437 aa22.1■■□□□ 1.13
PLOD3-216ENST00000489927 CYP27B1O15528 508 aa22.09■■□□□ 1.13
PLOD3-216ENST00000489927 MPRIPQ6WCQ1 1025 aa22.09■■□□□ 1.13
PLOD3-216ENST00000489927 PELP1Q8IZL8 1130 aaKnown RBP22.09■■□□□ 1.13
PLOD3-216ENST00000489927 PALLDQ8WX93 1383 aa22.08■■□□□ 1.12
PLOD3-216ENST00000489927 C5P01031 1676 aa22.07■■□□□ 1.12
PLOD3-216ENST00000489927 PPM1GO15355 546 aaPredicted RBP22.06■■□□□ 1.12
PLOD3-216ENST00000489927 MSL1Q68DK7 614 aa22.06■■□□□ 1.12
PLOD3-216ENST00000489927 TOGARAM1Q9Y4F4 1720 aa22.06■■□□□ 1.12
PLOD3-216ENST00000489927 NCAPD2Q15021 1401 aa22.05■■□□□ 1.12
PLOD3-216ENST00000489927 PKD1L3Q7Z443 1732 aa22.04■■□□□ 1.12
PLOD3-216ENST00000489927 ANKRD26Q9UPS8 1709 aa22.03■■□□□ 1.12
PLOD3-216ENST00000489927 WASHC2AQ641Q2 1341 aa22.02■■□□□ 1.12
PLOD3-216ENST00000489927 TAF1LQ8IZX4 1826 aa22.01■■□□□ 1.11
PLOD3-216ENST00000489927 YBX3P16989 372 aaKnown RBP eCLIP22.01■■□□□ 1.114e-6■■■□□ 17
PLOD3-216ENST00000489927 HMGB2P26583 209 aaKnown RBP22.01■■□□□ 1.11
PLOD3-216ENST00000489927 FLAD1Q8NFF5 587 aa22.01■■□□□ 1.11
PLOD3-216ENST00000489927 PIGBQ92521 554 aa22.01■■□□□ 1.11
PLOD3-216ENST00000489927 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
PLOD3-216ENST00000489927 ITGB4P16144 1822 aa22.01■■□□□ 1.11
PLOD3-216ENST00000489927 C1QTNF8P60827 252 aa22■■□□□ 1.11
PLOD3-216ENST00000489927 NKX1-1Q15270 411 aaPredicted RBP22■■□□□ 1.11
PLOD3-216ENST00000489927 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
PLOD3-216ENST00000489927 SPG7Q9UQ90 795 aa22■■□□□ 1.11
PLOD3-216ENST00000489927 C4BP0C0L5 1744 aa22■■□□□ 1.11
PLOD3-216ENST00000489927 AMIGO3Q86WK7 504 aa21.99■■□□□ 1.11
PLOD3-216ENST00000489927 EYA1Q99502 592 aa21.99■■□□□ 1.11
PLOD3-216ENST00000489927 GRIN3BO60391 1043 aa21.98■■□□□ 1.11
PLOD3-216ENST00000489927 AK7Q96M32 723 aa21.98■■□□□ 1.11
PLOD3-216ENST00000489927 POLKQ9UBT6 870 aa21.97■■□□□ 1.11
PLOD3-216ENST00000489927 SENP3-EIF4A1A0A087X0R7 540 aa21.96■■□□□ 1.11
PLOD3-216ENST00000489927 SMIM5Q71RC9 77 aa21.96■■□□□ 1.11
PLOD3-216ENST00000489927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.96■■□□□ 1.11
PLOD3-216ENST00000489927 CD2APQ9Y5K6 639 aa21.96■■□□□ 1.11
PLOD3-216ENST00000489927 PHF14O94880 888 aa21.95■■□□□ 1.1
PLOD3-216ENST00000489927 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
PLOD3-216ENST00000489927 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
PLOD3-216ENST00000489927 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
PLOD3-216ENST00000489927 SIK1P57059 783 aa21.94■■□□□ 1.1
PLOD3-216ENST00000489927 TMOD3Q9NYL9 352 aa21.94■■□□□ 1.1
PLOD3-216ENST00000489927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.93■■□□□ 1.1
PLOD3-216ENST00000489927 GIGYF1O75420 1035 aaPredicted RBP21.93■■□□□ 1.1
PLOD3-216ENST00000489927 PHKG2P15735 406 aa21.93■■□□□ 1.1
PLOD3-216ENST00000489927 TNNT2P45379 298 aaPredicted RBP21.93■■□□□ 1.1
PLOD3-216ENST00000489927 LINC00116Q8NCU8 138 aa21.93■■□□□ 1.1
PLOD3-216ENST00000489927 UBR3Q6ZT12 1888 aa21.92■■□□□ 1.1
PLOD3-216ENST00000489927 EIF4A2Q14240 407 aaKnown RBP21.92■■□□□ 1.1
PLOD3-216ENST00000489927 IFNL2Q8IZJ0 200 aa21.92■■□□□ 1.1
PLOD3-216ENST00000489927 ASAP1Q9ULH1 1129 aa21.92■■□□□ 1.1
PLOD3-216ENST00000489927 SSFA2P28290 1259 aa21.91■■□□□ 1.1
PLOD3-216ENST00000489927 ITPK1Q13572 414 aa21.9■■□□□ 1.1
PLOD3-216ENST00000489927 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
PLOD3-216ENST00000489927 PCGF6Q9BYE7 350 aa21.89■■□□□ 1.09
PLOD3-216ENST00000489927 ATP6V1AP38606 617 aa21.88■■□□□ 1.09
PLOD3-216ENST00000489927 ATG3Q9NT62 314 aa21.88■■□□□ 1.09
PLOD3-216ENST00000489927 GNPATO15228 680 aa21.87■■□□□ 1.09
PLOD3-216ENST00000489927 IGSF1Q8N6C5 1336 aa21.86■■□□□ 1.09
PLOD3-216ENST00000489927 PLEKHG2Q9H7P9 1386 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms