RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 MTFR1LQ9H019 292 aa13.23□□□□□ -0.29
CCT3-213ENST00000489870 NSD2O96028 1365 aa13.21□□□□□ -0.29
CCT3-213ENST00000489870 FLT4P35916 1363 aa13.21□□□□□ -0.29
CCT3-213ENST00000489870 DDX54Q8TDD1 881 aaKnown RBP13.21□□□□□ -0.29
CCT3-213ENST00000489870 GGNBP2Q9H3C7 697 aa13.21□□□□□ -0.29
CCT3-213ENST00000489870 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
CCT3-213ENST00000489870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCT3-213ENST00000489870 TATP17735 454 aaPredicted RBP13.2□□□□□ -0.3
CCT3-213ENST00000489870 NBPF6Q5VWK0 638 aa13.2□□□□□ -0.3
CCT3-213ENST00000489870 NBPF4Q96M43 638 aa13.2□□□□□ -0.3
CCT3-213ENST00000489870 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
CCT3-213ENST00000489870 WASHC2AQ641Q2 1341 aa13.19□□□□□ -0.3
CCT3-213ENST00000489870 EIF4G2P78344 907 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCT3-213ENST00000489870 LTV1Q96GA3 475 aaPredicted RBP13.19□□□□□ -0.3
CCT3-213ENST00000489870 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
CCT3-213ENST00000489870 CARD14Q9BXL6 1004 aa13.19□□□□□ -0.3
CCT3-213ENST00000489870 BTAF1O14981 1849 aa13.18□□□□□ -0.3
CCT3-213ENST00000489870 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
CCT3-213ENST00000489870 PTGER2P43116 358 aa13.18□□□□□ -0.3
CCT3-213ENST00000489870 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
CCT3-213ENST00000489870 MAP3K5Q99683 1374 aa13.18□□□□□ -0.3
CCT3-213ENST00000489870 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
CCT3-213ENST00000489870 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
CCT3-213ENST00000489870 RRS1Q15050 365 aaKnown RBP13.17□□□□□ -0.3
CCT3-213ENST00000489870 HSP90AB2PQ58FF8 381 aa13.17□□□□□ -0.3
CCT3-213ENST00000489870 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
CCT3-213ENST00000489870 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
CCT3-213ENST00000489870 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
CCT3-213ENST00000489870 FLAD1Q8NFF5 587 aa13.16□□□□□ -0.3
CCT3-213ENST00000489870 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
CCT3-213ENST00000489870 QSER1Q2KHR3 1735 aa13.16□□□□□ -0.3
CCT3-213ENST00000489870 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
CCT3-213ENST00000489870 FBLN1P23142 703 aa13.15□□□□□ -0.3
CCT3-213ENST00000489870 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
CCT3-213ENST00000489870 PCGF6Q9BYE7 350 aa13.15□□□□□ -0.3
CCT3-213ENST00000489870 SPG7Q9UQ90 795 aa13.15□□□□□ -0.3
CCT3-213ENST00000489870 NCAPD2Q15021 1401 aa13.14□□□□□ -0.31
CCT3-213ENST00000489870 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
CCT3-213ENST00000489870 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
CCT3-213ENST00000489870 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
CCT3-213ENST00000489870 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
CCT3-213ENST00000489870 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
CCT3-213ENST00000489870 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
CCT3-213ENST00000489870 ARXQ96QS3 562 aa13.13□□□□□ -0.31
CCT3-213ENST00000489870 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
CCT3-213ENST00000489870 LY75O60449 1722 aa13.13□□□□□ -0.31
CCT3-213ENST00000489870 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
CCT3-213ENST00000489870 POLD1P28340 1107 aa13.12□□□□□ -0.31
CCT3-213ENST00000489870 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
CCT3-213ENST00000489870 POLKQ9UBT6 870 aa13.12□□□□□ -0.31
CCT3-213ENST00000489870 MEGF6O75095 1541 aa13.12□□□□□ -0.31
CCT3-213ENST00000489870 YY1P25490 414 aa13.11□□□□□ -0.31
CCT3-213ENST00000489870 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
CCT3-213ENST00000489870 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
CCT3-213ENST00000489870 MYOM1P52179 1685 aa13.11□□□□□ -0.31
CCT3-213ENST00000489870 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
CCT3-213ENST00000489870 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
CCT3-213ENST00000489870 FHDC1Q9C0D6 1143 aaPredicted RBP13.1□□□□□ -0.31
CCT3-213ENST00000489870 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
CCT3-213ENST00000489870 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
CCT3-213ENST00000489870 CYP27B1O15528 508 aa13.09□□□□□ -0.31
CCT3-213ENST00000489870 ZNF827Q17R98 1081 aa13.09□□□□□ -0.31
CCT3-213ENST00000489870 IFNL2Q8IZJ0 200 aa13.09□□□□□ -0.31
CCT3-213ENST00000489870 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
CCT3-213ENST00000489870 EYA1Q99502 592 aa13.09□□□□□ -0.31
CCT3-213ENST00000489870 PNPLA7Q6ZV29 1317 aa13.09□□□□□ -0.31
CCT3-213ENST00000489870 HSP90AB1P08238 724 aaKnown RBP13.08□□□□□ -0.32
CCT3-213ENST00000489870 ERVV-2B6SEH9 535 aa13.07□□□□□ -0.32
CCT3-213ENST00000489870 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
CCT3-213ENST00000489870 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
CCT3-213ENST00000489870 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
CCT3-213ENST00000489870 PANK3Q9H999 370 aa13.07□□□□□ -0.32
CCT3-213ENST00000489870 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
CCT3-213ENST00000489870 DOT1LQ8TEK3 1739 aa13.07□□□□□ -0.32
CCT3-213ENST00000489870 CHD4Q14839 1912 aa13.06□□□□□ -0.32
CCT3-213ENST00000489870 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
CCT3-213ENST00000489870 USHBP1Q8N6Y0 703 aa13.06□□□□□ -0.32
CCT3-213ENST00000489870 KNSTRNQ9Y448 316 aa13.06□□□□□ -0.32
CCT3-213ENST00000489870 PLEKHO1Q53GL0 409 aaPredicted RBP13.05□□□□□ -0.32
CCT3-213ENST00000489870 PHKG2P15735 406 aa13.04□□□□□ -0.32
CCT3-213ENST00000489870 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
CCT3-213ENST00000489870 PIGBQ92521 554 aa13.04□□□□□ -0.32
CCT3-213ENST00000489870 DCAF5Q96JK2 942 aa13.04□□□□□ -0.32
CCT3-213ENST00000489870 TMOD3Q9NYL9 352 aa13.04□□□□□ -0.32
CCT3-213ENST00000489870 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
CCT3-213ENST00000489870 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
CCT3-213ENST00000489870 ITGB4P16144 1822 aa13.04□□□□□ -0.32
CCT3-213ENST00000489870 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
CCT3-213ENST00000489870 SSFA2P28290 1259 aa13.03□□□□□ -0.32
CCT3-213ENST00000489870 MORC1Q86VD1 984 aa13.03□□□□□ -0.32
CCT3-213ENST00000489870 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
CCT3-213ENST00000489870 CD2APQ9Y5K6 639 aa13.03□□□□□ -0.32
CCT3-213ENST00000489870 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
CCT3-213ENST00000489870 LOC102724428A0A0B4J2F2 783 aa13.02□□□□□ -0.33
CCT3-213ENST00000489870 SIK1P57059 783 aa13.02□□□□□ -0.33
CCT3-213ENST00000489870 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.33
CCT3-213ENST00000489870 RC3H1Q5TC82 1133 aaKnown RBP13.01□□□□□ -0.33
CCT3-213ENST00000489870 ZNF831Q5JPB2 1677 aa13□□□□□ -0.33
CCT3-213ENST00000489870 AK7Q96M32 723 aa13□□□□□ -0.33
CCT3-213ENST00000489870 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms