RNA–Protein interactions for RNA: ENST00000489769.1

SERPINA1-210, Transcript of serpin family A member 1, humanhuman

TSL 1 (best)

Gene SERPINA1, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-210ENST00000489769 PDE3BQ13370 1112 aa15.28■□□□□ 0.04
SERPINA1-210ENST00000489769 CCDC184Q52MB2 194 aa15.28■□□□□ 0.04
SERPINA1-210ENST00000489769 KRT27Q7Z3Y8 459 aa15.28■□□□□ 0.04
SERPINA1-210ENST00000489769 CDCA7Q9BWT1 371 aaPredicted RBP15.28■□□□□ 0.04
SERPINA1-210ENST00000489769 TATP17735 454 aaPredicted RBP15.28■□□□□ 0.04
SERPINA1-210ENST00000489769 SHANK3Q9BYB0 1731 aa15.28■□□□□ 0.04
SERPINA1-210ENST00000489769 NCAPD2Q15021 1401 aa15.27■□□□□ 0.03
SERPINA1-210ENST00000489769 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.03
SERPINA1-210ENST00000489769 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.03
SERPINA1-210ENST00000489769 NUDCQ9Y266 331 aa15.27■□□□□ 0.03
SERPINA1-210ENST00000489769 DDX54Q8TDD1 881 aaKnown RBP15.26■□□□□ 0.03
SERPINA1-210ENST00000489769 EP400Q96L91 3159 aa15.25■□□□□ 0.03
SERPINA1-210ENST00000489769 MARCH10Q8NA82 808 aaPredicted RBP15.25■□□□□ 0.03
SERPINA1-210ENST00000489769 ZCRB1Q8TBF4 217 aaKnown RBP15.25■□□□□ 0.03
SERPINA1-210ENST00000489769 OVOS2A0A0G2JMS6 1433 aa15.25■□□□□ 0.03
SERPINA1-210ENST00000489769 PKD1L3Q7Z443 1732 aa15.23■□□□□ 0.03
SERPINA1-210ENST00000489769 TNS2Q63HR2 1409 aa15.23■□□□□ 0.03
SERPINA1-210ENST00000489769 KDRP35968 1356 aa15.23■□□□□ 0.03
SERPINA1-210ENST00000489769 SBF2Q86WG5 1849 aa15.23■□□□□ 0.03
SERPINA1-210ENST00000489769 SUPT16HQ9Y5B9 1047 aaKnown RBP15.23■□□□□ 0.03
SERPINA1-210ENST00000489769 VIRMAQ69YN4 1812 aaKnown RBP15.22■□□□□ 0.03
SERPINA1-210ENST00000489769 PRKAR2BP31323 418 aa15.21■□□□□ 0.03
SERPINA1-210ENST00000489769 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
SERPINA1-210ENST00000489769 MRS2Q9HD23 443 aa15.21■□□□□ 0.03
SERPINA1-210ENST00000489769 SPG7Q9UQ90 795 aa15.21■□□□□ 0.03
SERPINA1-210ENST00000489769 PHACTR3Q96KR7 559 aa15.2■□□□□ 0.02
SERPINA1-210ENST00000489769 CYP27B1O15528 508 aa15.19■□□□□ 0.02
SERPINA1-210ENST00000489769 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
SERPINA1-210ENST00000489769 PLEKHO1Q53GL0 409 aaPredicted RBP15.19■□□□□ 0.02
SERPINA1-210ENST00000489769 CCER2I3L3R5 266 aa15.19■□□□□ 0.02
SERPINA1-210ENST00000489769 FCHSD2O94868 740 aa15.19■□□□□ 0.02
SERPINA1-210ENST00000489769 FAM196AQ6ZSG2 479 aa15.19■□□□□ 0.02
SERPINA1-210ENST00000489769 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
SERPINA1-210ENST00000489769 PCDH11XQ9BZA7 1347 aa15.18■□□□□ 0.02
SERPINA1-210ENST00000489769 PCDH11YQ9BZA8 1340 aa15.18■□□□□ 0.02
SERPINA1-210ENST00000489769 DLG5Q8TDM6 1919 aa15.18■□□□□ 0.02
SERPINA1-210ENST00000489769 ZNF530Q6P9A1 599 aaPredicted RBP15.18■□□□□ 0.02
SERPINA1-210ENST00000489769 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
SERPINA1-210ENST00000489769 TRIM37O94972 964 aa15.17■□□□□ 0.02
SERPINA1-210ENST00000489769 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
SERPINA1-210ENST00000489769 AMOTQ4VCS5 1084 aa15.17■□□□□ 0.02
SERPINA1-210ENST00000489769 PTF1AQ7RTS3 328 aa15.17■□□□□ 0.02
SERPINA1-210ENST00000489769 CCDC146Q8IYE0 955 aa15.17■□□□□ 0.02
SERPINA1-210ENST00000489769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.17■□□□□ 0.02
SERPINA1-210ENST00000489769 ITGB4P16144 1822 aa15.17■□□□□ 0.02
SERPINA1-210ENST00000489769 DOT1LQ8TEK3 1739 aa15.17■□□□□ 0.02
SERPINA1-210ENST00000489769 PHKG2P15735 406 aa15.15■□□□□ 0.02
SERPINA1-210ENST00000489769 IFNL2Q8IZJ0 200 aa15.15■□□□□ 0.02
SERPINA1-210ENST00000489769 KCNQ2O43526 872 aa15.15■□□□□ 0.02
SERPINA1-210ENST00000489769 C1orf141Q5JVX7 400 aa15.15■□□□□ 0.02
SERPINA1-210ENST00000489769 PNISRQ8TF01 805 aaKnown RBP15.15■□□□□ 0.02
SERPINA1-210ENST00000489769 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
SERPINA1-210ENST00000489769 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
SERPINA1-210ENST00000489769 SENP3-EIF4A1A0A087X0R7 540 aa15.14■□□□□ 0.01
SERPINA1-210ENST00000489769 UPF1Q92900 1129 aaKnown RBP eCLIP15.14■□□□□ 0.01
SERPINA1-210ENST00000489769 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
SERPINA1-210ENST00000489769 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
SERPINA1-210ENST00000489769 MPRIPQ6WCQ1 1025 aa15.13■□□□□ 0.01
SERPINA1-210ENST00000489769 FAM9BQ8IZU0 186 aa15.13■□□□□ 0.01
SERPINA1-210ENST00000489769 PRIM1P49642 420 aaKnown RBP15.12■□□□□ 0.01
SERPINA1-210ENST00000489769 TNS1Q9HBL0 1735 aaKnown RBP15.12■□□□□ 0.01
SERPINA1-210ENST00000489769 BTAF1O14981 1849 aa15.12■□□□□ 0.01
SERPINA1-210ENST00000489769 NEFMP07197 916 aa15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 NKX1-1Q15270 411 aaPredicted RBP15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 AKAP4Q5JQC9 854 aa15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 PNNQ9H307 717 aaKnown RBP15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 LGR6Q9HBX8 967 aa15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 MAPK8IP3Q9UPT6 1336 aa15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 PLEKHG2Q9H7P9 1386 aa15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 NHSQ6T4R5 1651 aa15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 GAS2L2Q8NHY3 880 aa15.11■□□□□ 0.01
SERPINA1-210ENST00000489769 NEUROD2Q15784 382 aa15.1■□□□□ 0.01
SERPINA1-210ENST00000489769 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
SERPINA1-210ENST00000489769 RRP7AQ9Y3A4 280 aaKnown RBP15.1■□□□□ 0.01
SERPINA1-210ENST00000489769 BCL9O00512 1426 aa15.09■□□□□ 0.01
SERPINA1-210ENST00000489769 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
SERPINA1-210ENST00000489769 SOCS7O14512 581 aa15.09■□□□□ 0.01
SERPINA1-210ENST00000489769 APBA3O96018 575 aa15.09■□□□□ 0.01
SERPINA1-210ENST00000489769 SF3B2Q13435 895 aaKnown RBP15.09■□□□□ 0.01
SERPINA1-210ENST00000489769 DCAF5Q96JK2 942 aa15.09■□□□□ 0.01
SERPINA1-210ENST00000489769 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
SERPINA1-210ENST00000489769 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
SERPINA1-210ENST00000489769 HSP90AB1P08238 724 aaKnown RBP15.08■□□□□ 0
SERPINA1-210ENST00000489769 DEFB132Q7Z7B7 95 aa15.08■□□□□ 0
SERPINA1-210ENST00000489769 MAP3K5Q99683 1374 aa15.08■□□□□ 0
SERPINA1-210ENST00000489769 RNMTO43148 476 aaKnown RBP15.07■□□□□ 0
SERPINA1-210ENST00000489769 DCTN1Q14203 1278 aa15.07■□□□□ 0
SERPINA1-210ENST00000489769 NFE2L2Q16236 605 aa15.07■□□□□ 0
SERPINA1-210ENST00000489769 MCM10Q7L590 875 aa15.07■□□□□ 0
SERPINA1-210ENST00000489769 TMPOP42166 694 aaKnown RBP15.07■□□□□ 0
SERPINA1-210ENST00000489769 RIPK4P57078 832 aa15.07■□□□□ 0
SERPINA1-210ENST00000489769 IL17REQ8NFR9 667 aa15.07■□□□□ 0
SERPINA1-210ENST00000489769 PIGBQ92521 554 aa15.07■□□□□ 0
SERPINA1-210ENST00000489769 APAF1O14727 1248 aa15.06■□□□□ 0
SERPINA1-210ENST00000489769 EN1Q05925 392 aaPredicted RBP15.06■□□□□ 0
SERPINA1-210ENST00000489769 CCDC125Q86Z20 511 aa15.06■□□□□ 0
SERPINA1-210ENST00000489769 NFATC2IPQ8NCF5 419 aa15.06■□□□□ 0
SERPINA1-210ENST00000489769 ERVV-2B6SEH9 535 aa15.05■□□□□ -0
SERPINA1-210ENST00000489769 CABP4P57796 275 aa15.05■□□□□ -0
SERPINA1-210ENST00000489769 RTF1Q92541 710 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms