RNA–Protein interactions for RNA: ENST00000489559.1

ACAA1-218, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-218ENST00000489559 PLSCR1O15162 318 aa30.5■■■□□ 2.47
ACAA1-218ENST00000489559 ZCRB1Q8TBF4 217 aaKnown RBP30.5■■■□□ 2.47
ACAA1-218ENST00000489559 NCAPD2Q15021 1401 aa30.49■■■□□ 2.47
ACAA1-218ENST00000489559 PER1O15534 1290 aaPredicted RBP30.49■■■□□ 2.47
ACAA1-218ENST00000489559 KAT6BQ8WYB5 2073 aa30.49■■■□□ 2.47
ACAA1-218ENST00000489559 TATP17735 454 aaPredicted RBP30.48■■■□□ 2.47
ACAA1-218ENST00000489559 ACSBG1Q96GR2 724 aa30.47■■■□□ 2.47
ACAA1-218ENST00000489559 KCNQ2O43526 872 aa30.46■■■□□ 2.47
ACAA1-218ENST00000489559 BTAF1O14981 1849 aa30.45■■■□□ 2.47
ACAA1-218ENST00000489559 DOT1LQ8TEK3 1739 aa30.44■■■□□ 2.46
ACAA1-218ENST00000489559 EIF4A2Q14240 407 aaKnown RBP30.44■■■□□ 2.46
ACAA1-218ENST00000489559 EYA1Q99502 592 aa30.44■■■□□ 2.46
ACAA1-218ENST00000489559 PKD1L3Q7Z443 1732 aa30.44■■■□□ 2.46
ACAA1-218ENST00000489559 PSDA5PKW4 1024 aaPredicted RBP30.43■■■□□ 2.46
ACAA1-218ENST00000489559 R3HDM1Q15032 1099 aaKnown RBP30.4■■■□□ 2.46
ACAA1-218ENST00000489559 NBPF14Q5TI25 921 aa30.39■■■□□ 2.46
ACAA1-218ENST00000489559 PCDH11XQ9BZA7 1347 aa30.39■■■□□ 2.46
ACAA1-218ENST00000489559 PCDH11YQ9BZA8 1340 aa30.39■■■□□ 2.46
ACAA1-218ENST00000489559 NPC1L1Q9UHC9 1359 aa30.39■■■□□ 2.45
ACAA1-218ENST00000489559 CC2D1BQ5T0F9 858 aaKnown RBP30.38■■■□□ 2.45
ACAA1-218ENST00000489559 PROM2Q8N271 834 aa30.35■■■□□ 2.45
ACAA1-218ENST00000489559 IGSF1Q8N6C5 1336 aa30.35■■■□□ 2.45
ACAA1-218ENST00000489559 TXNRD1Q16881 649 aa30.34■■■□□ 2.45
ACAA1-218ENST00000489559 PRIM1P49642 420 aaKnown RBP30.32■■■□□ 2.44
ACAA1-218ENST00000489559 SYTL4Q96C24 671 aaPredicted RBP30.32■■■□□ 2.44
ACAA1-218ENST00000489559 SPG7Q9UQ90 795 aa30.32■■■□□ 2.44
ACAA1-218ENST00000489559 CYP27B1O15528 508 aa30.31■■■□□ 2.44
ACAA1-218ENST00000489559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.31■■■□□ 2.44
ACAA1-218ENST00000489559 LRP5O75197 1615 aa30.31■■■□□ 2.44
ACAA1-218ENST00000489559 PLEKHG2Q9H7P9 1386 aa30.3■■■□□ 2.44
ACAA1-218ENST00000489559 MTHFSP49914 203 aa30.29■■■□□ 2.44
ACAA1-218ENST00000489559 TOGARAM1Q9Y4F4 1720 aa30.27■■■□□ 2.44
ACAA1-218ENST00000489559 CNGB1Q14028 1251 aaPredicted RBP30.26■■■□□ 2.43
ACAA1-218ENST00000489559 ANO8Q9HCE9 1232 aaPredicted RBP30.26■■■□□ 2.43
ACAA1-218ENST00000489559 ITGB4P16144 1822 aa30.26■■■□□ 2.43
ACAA1-218ENST00000489559 LY75O60449 1722 aa30.25■■■□□ 2.43
ACAA1-218ENST00000489559 IL13P35225 146 aa30.25■■■□□ 2.43
ACAA1-218ENST00000489559 PAPPAQ13219 1627 aa30.23■■■□□ 2.43
ACAA1-218ENST00000489559 NKX1-1Q15270 411 aaPredicted RBP30.23■■■□□ 2.43
ACAA1-218ENST00000489559 IFNL2Q8IZJ0 200 aa30.21■■■□□ 2.43
ACAA1-218ENST00000489559 KDRP35968 1356 aa30.2■■■□□ 2.43
ACAA1-218ENST00000489559 AEBP1Q8IUX7 1158 aa30.2■■■□□ 2.43
ACAA1-218ENST00000489559 STK32BQ9NY57 414 aa30.2■■■□□ 2.43
ACAA1-218ENST00000489559 PHKG2P15735 406 aa30.19■■■□□ 2.42
ACAA1-218ENST00000489559 SLC27A3Q5K4L6 730 aa30.19■■■□□ 2.42
ACAA1-218ENST00000489559 SULT6B1Q6IMI4 303 aa30.19■■■□□ 2.42
ACAA1-218ENST00000489559 CASZ1Q86V15 1759 aa30.18■■■□□ 2.42
ACAA1-218ENST00000489559 PLEKHO1Q53GL0 409 aaPredicted RBP30.18■■■□□ 2.42
ACAA1-218ENST00000489559 SLC15A2Q16348 729 aa30.17■■■□□ 2.42
ACAA1-218ENST00000489559 LRRC4BQ9NT99 713 aa30.17■■■□□ 2.42
ACAA1-218ENST00000489559 DIAPH1O60610 1272 aaKnown RBP30.16■■■□□ 2.42
ACAA1-218ENST00000489559 AMOTQ4VCS5 1084 aa30.16■■■□□ 2.42
ACAA1-218ENST00000489559 MPRIPQ6WCQ1 1025 aa30.16■■■□□ 2.42
ACAA1-218ENST00000489559 COL3A1P02461 1466 aaPredicted RBP30.15■■■□□ 2.42
ACAA1-218ENST00000489559 ZNF530Q6P9A1 599 aaPredicted RBP30.11■■■□□ 2.41
ACAA1-218ENST00000489559 HSP90AB1P08238 724 aaKnown RBP30.1■■■□□ 2.41
ACAA1-218ENST00000489559 CCNL1Q9UK58 526 aaPredicted RBP30.1■■■□□ 2.41
ACAA1-218ENST00000489559 QSER1Q2KHR3 1735 aa30.09■■■□□ 2.41
ACAA1-218ENST00000489559 PALLDQ8WX93 1383 aa30.09■■■□□ 2.41
ACAA1-218ENST00000489559 PIGBQ92521 554 aa30.09■■■□□ 2.41
ACAA1-218ENST00000489559 TMOD3Q9NYL9 352 aa30.09■■■□□ 2.41
ACAA1-218ENST00000489559 HMOX1P09601 288 aa30.08■■■□□ 2.41
ACAA1-218ENST00000489559 KCNQ4P56696 695 aa30.08■■■□□ 2.41
ACAA1-218ENST00000489559 ZNF827Q17R98 1081 aa30.08■■■□□ 2.41
ACAA1-218ENST00000489559 SMARCC1Q92922 1105 aaPredicted RBP30.08■■■□□ 2.41
ACAA1-218ENST00000489559 SRCAPQ6ZRS2 3230 aa30.08■■■□□ 2.41
ACAA1-218ENST00000489559 DCAF5Q96JK2 942 aa30.07■■■□□ 2.4
ACAA1-218ENST00000489559 C5P01031 1676 aa30.07■■■□□ 2.4
ACAA1-218ENST00000489559 PPP2R1AP30153 589 aa30.06■■■□□ 2.4
ACAA1-218ENST00000489559 C1orf141Q5JVX7 400 aa30.06■■■□□ 2.4
ACAA1-218ENST00000489559 AKT1S1Q96B36 256 aa30.06■■■□□ 2.4
ACAA1-218ENST00000489559 CFAP53Q96M91 514 aa30.06■■■□□ 2.4
ACAA1-218ENST00000489559 PDGFDQ9GZP0 370 aaPredicted RBP30.06■■■□□ 2.4
ACAA1-218ENST00000489559 SPON1Q9HCB6 807 aa30.06■■■□□ 2.4
ACAA1-218ENST00000489559 TAF1LQ8IZX4 1826 aa30.06■■■□□ 2.4
ACAA1-218ENST00000489559 TUBGCP6Q96RT7 1819 aa30.06■■■□□ 2.4
ACAA1-218ENST00000489559 KDM6AO15550 1401 aaPredicted RBP30.05■■■□□ 2.4
ACAA1-218ENST00000489559 ERVV-2B6SEH9 535 aa30.03■■■□□ 2.4
ACAA1-218ENST00000489559 SCN11AQ9UI33 1791 aa30.03■■■□□ 2.4
ACAA1-218ENST00000489559 U2SURPO15042 1029 aaKnown RBP30.02■■■□□ 2.4
ACAA1-218ENST00000489559 ZEB1P37275 1124 aaPredicted RBP30.02■■■□□ 2.4
ACAA1-218ENST00000489559 HMGB2P26583 209 aaKnown RBP30.01■■■□□ 2.39
ACAA1-218ENST00000489559 VIRMAQ69YN4 1812 aaKnown RBP30■■■□□ 2.39
ACAA1-218ENST00000489559 ZBTB7AO95365 584 aa29.99■■■□□ 2.39
ACAA1-218ENST00000489559 AKAP4Q5JQC9 854 aa29.98■■■□□ 2.39
ACAA1-218ENST00000489559 ASAP1Q9ULH1 1129 aa29.98■■■□□ 2.39
ACAA1-218ENST00000489559 TFCP2L1Q9NZI6 479 aa29.97■■■□□ 2.39
ACAA1-218ENST00000489559 CABP4P57796 275 aa29.96■■■□□ 2.39
ACAA1-218ENST00000489559 MTFR1LQ9H019 292 aa29.95■■■□□ 2.39
ACAA1-218ENST00000489559 ATG3Q9NT62 314 aa29.95■■■□□ 2.39
ACAA1-218ENST00000489559 NUDCQ9Y266 331 aa29.95■■■□□ 2.39
ACAA1-218ENST00000489559 C4BP0C0L5 1744 aa29.95■■■□□ 2.38
ACAA1-218ENST00000489559 PNPLA7Q6ZV29 1317 aa29.95■■■□□ 2.38
ACAA1-218ENST00000489559 LOC102724428A0A0B4J2F2 783 aa29.94■■■□□ 2.38
ACAA1-218ENST00000489559 SIK1P57059 783 aa29.94■■■□□ 2.38
ACAA1-218ENST00000489559 DDX10Q13206 875 aaKnown RBP29.94■■■□□ 2.38
ACAA1-218ENST00000489559 MTHFSDQ2M296 383 aaKnown RBP29.94■■■□□ 2.38
ACAA1-218ENST00000489559 PPP1R1BQ9UD71 204 aaPredicted RBP29.93■■■□□ 2.38
ACAA1-218ENST00000489559 ATF5Q9Y2D1 282 aaPredicted RBP29.93■■■□□ 2.38
ACAA1-218ENST00000489559 ZNF831Q5JPB2 1677 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms