RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 EXOC5O00471 708 aa19.39■□□□□ 0.69
HLA-F-229ENST00000489502 U2SURPO15042 1029 aaKnown RBP19.38■□□□□ 0.69
HLA-F-229ENST00000489502 KDRP35968 1356 aa19.38■□□□□ 0.69
HLA-F-229ENST00000489502 SULT6B1Q6IMI4 303 aa19.38■□□□□ 0.69
HLA-F-229ENST00000489502 SBF2Q86WG5 1849 aa19.38■□□□□ 0.69
HLA-F-229ENST00000489502 TNS1Q9HBL0 1735 aaKnown RBP19.38■□□□□ 0.69
HLA-F-229ENST00000489502 HMOX1P09601 288 aa19.37■□□□□ 0.69
HLA-F-229ENST00000489502 DOT1LQ8TEK3 1739 aa19.37■□□□□ 0.69
HLA-F-229ENST00000489502 ZCRB1Q8TBF4 217 aaKnown RBP19.36■□□□□ 0.69
HLA-F-229ENST00000489502 UPF1Q92900 1129 aaKnown RBP eCLIP19.36■□□□□ 0.69
HLA-F-229ENST00000489502 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
HLA-F-229ENST00000489502 NHSQ6T4R5 1651 aa19.34■□□□□ 0.69
HLA-F-229ENST00000489502 FAM196AQ6ZSG2 479 aa19.34■□□□□ 0.69
HLA-F-229ENST00000489502 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.69
HLA-F-229ENST00000489502 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.69
HLA-F-229ENST00000489502 TOGARAM1Q9Y4F4 1720 aa19.33■□□□□ 0.68
HLA-F-229ENST00000489502 TRIM37O94972 964 aa19.31■□□□□ 0.68
HLA-F-229ENST00000489502 BCL9O00512 1426 aa19.31■□□□□ 0.68
HLA-F-229ENST00000489502 KAT6BQ8WYB5 2073 aa19.31■□□□□ 0.68
HLA-F-229ENST00000489502 PLEKHG2Q9H7P9 1386 aa19.31■□□□□ 0.68
HLA-F-229ENST00000489502 CYP27B1O15528 508 aa19.3■□□□□ 0.68
HLA-F-229ENST00000489502 ANP32CO43423 234 aa19.3■□□□□ 0.68
HLA-F-229ENST00000489502 U2AF1L5P0DN76 240 aaPredicted RBP19.3■□□□□ 0.68
HLA-F-229ENST00000489502 U2AF1Q01081 240 aaKnown RBP eCLIP19.3■□□□□ 0.68
HLA-F-229ENST00000489502 SPG7Q9UQ90 795 aa19.3■□□□□ 0.68
HLA-F-229ENST00000489502 NUDCQ9Y266 331 aa19.3■□□□□ 0.68
HLA-F-229ENST00000489502 ACSBG1Q96GR2 724 aa19.29■□□□□ 0.68
HLA-F-229ENST00000489502 PTF1AQ7RTS3 328 aa19.28■□□□□ 0.68
HLA-F-229ENST00000489502 RSPH6AQ9H0K4 717 aa19.28■□□□□ 0.68
HLA-F-229ENST00000489502 BTAF1O14981 1849 aa19.28■□□□□ 0.68
HLA-F-229ENST00000489502 ZNF530Q6P9A1 599 aaPredicted RBP19.27■□□□□ 0.68
HLA-F-229ENST00000489502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.27■□□□□ 0.68
HLA-F-229ENST00000489502 PRKAR2BP31323 418 aa19.26■□□□□ 0.67
HLA-F-229ENST00000489502 PLEKHO1Q53GL0 409 aaPredicted RBP19.26■□□□□ 0.67
HLA-F-229ENST00000489502 KCNQ2O43526 872 aa19.25■□□□□ 0.67
HLA-F-229ENST00000489502 PHKG2P15735 406 aa19.25■□□□□ 0.67
HLA-F-229ENST00000489502 ITGB4P16144 1822 aa19.24■□□□□ 0.67
HLA-F-229ENST00000489502 SF3B2Q13435 895 aaKnown RBP19.24■□□□□ 0.67
HLA-F-229ENST00000489502 AMOTQ4VCS5 1084 aa19.24■□□□□ 0.67
HLA-F-229ENST00000489502 CCDC184Q52MB2 194 aa19.24■□□□□ 0.67
HLA-F-229ENST00000489502 DEFB132Q7Z7B7 95 aa19.24■□□□□ 0.67
HLA-F-229ENST00000489502 KDM6AO15550 1401 aaPredicted RBP19.24■□□□□ 0.67
HLA-F-229ENST00000489502 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
HLA-F-229ENST00000489502 IFNL2Q8IZJ0 200 aa19.23■□□□□ 0.67
HLA-F-229ENST00000489502 MTHFSDQ2M296 383 aaKnown RBP19.22■□□□□ 0.67
HLA-F-229ENST00000489502 CCDC125Q86Z20 511 aa19.22■□□□□ 0.67
HLA-F-229ENST00000489502 SYTL4Q96C24 671 aaPredicted RBP19.22■□□□□ 0.67
HLA-F-229ENST00000489502 C1orf141Q5JVX7 400 aa19.21■□□□□ 0.67
HLA-F-229ENST00000489502 PHACTR3Q96KR7 559 aa19.21■□□□□ 0.67
HLA-F-229ENST00000489502 BCL11BQ9C0K0 894 aaPredicted RBP19.21■□□□□ 0.67
HLA-F-229ENST00000489502 RGPD3A6NKT7 1758 aaPredicted RBP19.21■□□□□ 0.67
HLA-F-229ENST00000489502 RGPD4Q7Z3J3 1758 aa19.21■□□□□ 0.67
HLA-F-229ENST00000489502 SCN11AQ9UI33 1791 aa19.21■□□□□ 0.67
HLA-F-229ENST00000489502 APBA3O96018 575 aa19.2■□□□□ 0.66
HLA-F-229ENST00000489502 BAG6P46379 1132 aa19.2■□□□□ 0.66
HLA-F-229ENST00000489502 PRIM1P49642 420 aaKnown RBP19.2■□□□□ 0.66
HLA-F-229ENST00000489502 RREB1Q92766 1687 aa19.2■□□□□ 0.66
HLA-F-229ENST00000489502 FCHSD2O94868 740 aa19.19■□□□□ 0.66
HLA-F-229ENST00000489502 EN1Q05925 392 aaPredicted RBP19.19■□□□□ 0.66
HLA-F-229ENST00000489502 WDR43Q15061 677 aaKnown RBP eCLIP19.19■□□□□ 0.66
HLA-F-229ENST00000489502 NKX1-1Q15270 411 aaPredicted RBP19.19■□□□□ 0.66
HLA-F-229ENST00000489502 ADAMTS7Q9UKP4 1686 aa19.18■□□□□ 0.66
HLA-F-229ENST00000489502 MRS2Q9HD23 443 aa19.18■□□□□ 0.66
HLA-F-229ENST00000489502 MAP3K5Q99683 1374 aa19.18■□□□□ 0.66
HLA-F-229ENST00000489502 MPRIPQ6WCQ1 1025 aa19.17■□□□□ 0.66
HLA-F-229ENST00000489502 DLG5Q8TDM6 1919 aa19.17■□□□□ 0.66
HLA-F-229ENST00000489502 NUP188Q5SRE5 1749 aa19.17■□□□□ 0.66
HLA-F-229ENST00000489502 AKAP4Q5JQC9 854 aa19.16■□□□□ 0.66
HLA-F-229ENST00000489502 GAS2L2Q8NHY3 880 aa19.16■□□□□ 0.66
HLA-F-229ENST00000489502 MRC1P22897 1456 aa19.16■□□□□ 0.66
HLA-F-229ENST00000489502 HSP90AB1P08238 724 aaKnown RBP19.15■□□□□ 0.66
HLA-F-229ENST00000489502 EZH2Q15910 746 aaKnown RBP19.15■□□□□ 0.66
HLA-F-229ENST00000489502 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
HLA-F-229ENST00000489502 DCAF5Q96JK2 942 aa19.15■□□□□ 0.66
HLA-F-229ENST00000489502 PLEKHF1Q96S99 279 aa19.15■□□□□ 0.66
HLA-F-229ENST00000489502 ADAMTS8Q9UP79 889 aa19.14■□□□□ 0.65
HLA-F-229ENST00000489502 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.65
HLA-F-229ENST00000489502 LY75O60449 1722 aa19.14■□□□□ 0.65
HLA-F-229ENST00000489502 DIEXFQ68CQ4 756 aaKnown RBP19.13■□□□□ 0.65
HLA-F-229ENST00000489502 CAMKK2Q96RR4 588 aa19.13■□□□□ 0.65
HLA-F-229ENST00000489502 NEFMP07197 916 aa19.12■□□□□ 0.65
HLA-F-229ENST00000489502 LGR6Q9HBX8 967 aa19.12■□□□□ 0.65
HLA-F-229ENST00000489502 TMOD3Q9NYL9 352 aa19.12■□□□□ 0.65
HLA-F-229ENST00000489502 RNMTO43148 476 aaKnown RBP19.11■□□□□ 0.65
HLA-F-229ENST00000489502 PIGBQ92521 554 aa19.11■□□□□ 0.65
HLA-F-229ENST00000489502 SIPA1L3O60292 1781 aaPredicted RBP19.11■□□□□ 0.65
HLA-F-229ENST00000489502 PAPPAQ13219 1627 aa19.11■□□□□ 0.65
HLA-F-229ENST00000489502 GNAT3A8MTJ3 354 aa19.1■□□□□ 0.65
HLA-F-229ENST00000489502 ERVV-2B6SEH9 535 aa19.1■□□□□ 0.65
HLA-F-229ENST00000489502 CABP4P57796 275 aa19.1■□□□□ 0.65
HLA-F-229ENST00000489502 PALLDQ8WX93 1383 aa19.09■□□□□ 0.65
HLA-F-229ENST00000489502 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
HLA-F-229ENST00000489502 PLSCR1O15162 318 aa19.08■□□□□ 0.64
HLA-F-229ENST00000489502 NFE2L2Q16236 605 aa19.08■□□□□ 0.64
HLA-F-229ENST00000489502 TXNRD1Q16881 649 aa19.08■□□□□ 0.64
HLA-F-229ENST00000489502 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.64
HLA-F-229ENST00000489502 SLC52A2Q9HAB3 445 aa19.07■□□□□ 0.64
HLA-F-229ENST00000489502 RRP7AQ9Y3A4 280 aaKnown RBP19.07■□□□□ 0.64
HLA-F-229ENST00000489502 KCNQ4P56696 695 aa19.06■□□□□ 0.64
HLA-F-229ENST00000489502 DCTN1Q14203 1278 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms