RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 PPP1R18Q6NYC8 613 aa13.18□□□□□ -0.3
TNRC6B-208ENST00000489500 NAIPQ13075 1403 aa13.18□□□□□ -0.3
TNRC6B-208ENST00000489500 GPR37O15354 613 aa13.17□□□□□ -0.3
TNRC6B-208ENST00000489500 ATF3P18847 181 aa13.17□□□□□ -0.3
TNRC6B-208ENST00000489500 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
TNRC6B-208ENST00000489500 SLAIN2Q9P270 581 aa13.17□□□□□ -0.3
TNRC6B-208ENST00000489500 ROBO1Q9Y6N7 1651 aa13.17□□□□□ -0.3
TNRC6B-208ENST00000489500 HFM1A2PYH4 1435 aa13.16□□□□□ -0.3
TNRC6B-208ENST00000489500 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
TNRC6B-208ENST00000489500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
TNRC6B-208ENST00000489500 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
TNRC6B-208ENST00000489500 PCDHB3Q9Y5E6 796 aa13.14□□□□□ -0.31
TNRC6B-208ENST00000489500 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
TNRC6B-208ENST00000489500 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
TNRC6B-208ENST00000489500 GNPATO15228 680 aa13.13□□□□□ -0.31
TNRC6B-208ENST00000489500 OATP04181 439 aa13.13□□□□□ -0.31
TNRC6B-208ENST00000489500 SLC10A3P09131 477 aa13.13□□□□□ -0.31
TNRC6B-208ENST00000489500 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
TNRC6B-208ENST00000489500 METTL3Q86U44 580 aaKnown RBP13.13□□□□□ -0.31
TNRC6B-208ENST00000489500 SETBP1Q9Y6X0 1596 aa13.12□□□□□ -0.31
TNRC6B-208ENST00000489500 ZPR1O75312 459 aa13.12□□□□□ -0.31
TNRC6B-208ENST00000489500 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
TNRC6B-208ENST00000489500 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
TNRC6B-208ENST00000489500 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
TNRC6B-208ENST00000489500 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
TNRC6B-208ENST00000489500 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
TNRC6B-208ENST00000489500 CFHP08603 1231 aa13.1□□□□□ -0.31
TNRC6B-208ENST00000489500 PRKD2Q9BZL6 878 aa13.1□□□□□ -0.31
TNRC6B-208ENST00000489500 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.31
TNRC6B-208ENST00000489500 JCADQ9P266 1359 aa13.08□□□□□ -0.31
TNRC6B-208ENST00000489500 DCCP43146 1447 aa13.08□□□□□ -0.32
TNRC6B-208ENST00000489500 ACTN4O43707 911 aaKnown RBP13.08□□□□□ -0.32
TNRC6B-208ENST00000489500 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
TNRC6B-208ENST00000489500 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
TNRC6B-208ENST00000489500 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
TNRC6B-208ENST00000489500 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
TNRC6B-208ENST00000489500 CCDC144AA2RUR9 1427 aa13.06□□□□□ -0.32
TNRC6B-208ENST00000489500 XRN1Q8IZH2 1706 aaKnown RBP13.06□□□□□ -0.32
TNRC6B-208ENST00000489500 TLL1O43897 1013 aa13.06□□□□□ -0.32
TNRC6B-208ENST00000489500 PPLO60437 1756 aa13.05□□□□□ -0.32
TNRC6B-208ENST00000489500 MEX3CQ5U5Q3 659 aaKnown RBP13.05□□□□□ -0.32
TNRC6B-208ENST00000489500 GPIHBP1Q8IV16 184 aa13.05□□□□□ -0.32
TNRC6B-208ENST00000489500 PTPRUQ92729 1446 aa13.05□□□□□ -0.32
TNRC6B-208ENST00000489500 MPHOSPH9Q99550 1183 aa13.04□□□□□ -0.32
TNRC6B-208ENST00000489500 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
TNRC6B-208ENST00000489500 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
TNRC6B-208ENST00000489500 METP08581 1390 aa13.03□□□□□ -0.32
TNRC6B-208ENST00000489500 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.32
TNRC6B-208ENST00000489500 COL16A1Q07092 1604 aaPredicted RBP13.02□□□□□ -0.33
TNRC6B-208ENST00000489500 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
TNRC6B-208ENST00000489500 ADGRL3Q9HAR2 1447 aa13.01□□□□□ -0.33
TNRC6B-208ENST00000489500 SHPRHQ149N8 1683 aa13.01□□□□□ -0.33
TNRC6B-208ENST00000489500 SETD5Q9C0A6 1442 aa13□□□□□ -0.33
TNRC6B-208ENST00000489500 GGCXP38435 758 aa13□□□□□ -0.33
TNRC6B-208ENST00000489500 BRINP3Q76B58 766 aa13□□□□□ -0.33
TNRC6B-208ENST00000489500 LRRC59Q96AG4 307 aaKnown RBP13□□□□□ -0.33
TNRC6B-208ENST00000489500 DAXXQ9UER7 740 aaPredicted RBP13□□□□□ -0.33
TNRC6B-208ENST00000489500 V9GY48 417 aaPredicted RBP13□□□□□ -0.33
TNRC6B-208ENST00000489500 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
TNRC6B-208ENST00000489500 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
TNRC6B-208ENST00000489500 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
TNRC6B-208ENST00000489500 Q6ZNB5 142 aa12.99□□□□□ -0.33
TNRC6B-208ENST00000489500 TMUB1Q9BVT8 246 aa12.99□□□□□ -0.33
TNRC6B-208ENST00000489500 NALCNQ8IZF0 1738 aa12.99□□□□□ -0.33
TNRC6B-208ENST00000489500 RNF223E7ERA6 249 aa12.98□□□□□ -0.33
TNRC6B-208ENST00000489500 GFRA3O60609 400 aa12.98□□□□□ -0.33
TNRC6B-208ENST00000489500 PUS10Q3MIT2 529 aaKnown RBP12.98□□□□□ -0.33
TNRC6B-208ENST00000489500 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
TNRC6B-208ENST00000489500 MST1RQ04912 1400 aa12.97□□□□□ -0.33
TNRC6B-208ENST00000489500 SETD1AO15047 1707 aaKnown RBP12.97□□□□□ -0.33
TNRC6B-208ENST00000489500 NHSL1Q5SYE7 1610 aa12.96□□□□□ -0.33
TNRC6B-208ENST00000489500 IFT172Q9UG01 1749 aa12.96□□□□□ -0.34
TNRC6B-208ENST00000489500 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
TNRC6B-208ENST00000489500 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
TNRC6B-208ENST00000489500 NR1I2O75469 434 aa12.95□□□□□ -0.34
TNRC6B-208ENST00000489500 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
TNRC6B-208ENST00000489500 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
TNRC6B-208ENST00000489500 EMID1Q96A84 441 aaPredicted RBP12.95□□□□□ -0.34
TNRC6B-208ENST00000489500 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
TNRC6B-208ENST00000489500 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
TNRC6B-208ENST00000489500 NUTM2BA6NNL0 878 aaPredicted RBP12.94□□□□□ -0.34
TNRC6B-208ENST00000489500 NUTM2EB1AL46 878 aaPredicted RBP12.94□□□□□ -0.34
TNRC6B-208ENST00000489500 S1PR4O95977 384 aa12.94□□□□□ -0.34
TNRC6B-208ENST00000489500 NUTM2AQ8IVF1 878 aaPredicted RBP12.94□□□□□ -0.34
TNRC6B-208ENST00000489500 ROBO2Q9HCK4 1378 aa12.93□□□□□ -0.34
TNRC6B-208ENST00000489500 ADGRF5Q8IZF2 1346 aa12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 C1orf167Q5SNV9 1468 aa12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 LAMC1P11047 1609 aa12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 ADH1BP00325 375 aa12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 LAPTM4AQ15012 233 aa12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 SPATA31E1Q6ZUB1 1445 aa12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 STK26Q9P289 416 aa12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
TNRC6B-208ENST00000489500 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
TNRC6B-208ENST00000489500 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
TNRC6B-208ENST00000489500 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
TNRC6B-208ENST00000489500 LCE2BO14633 110 aa12.9□□□□□ -0.34
TNRC6B-208ENST00000489500 HRCP23327 699 aa12.9□□□□□ -0.34
TNRC6B-208ENST00000489500 FUT2Q10981 343 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms