RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 COL23A1Q86Y22 540 aaPredicted RBP14.04□□□□□ -0.16
SH3YL1-225ENST00000488979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.03□□□□□ -0.165e-7■■□□□ 11.4
SH3YL1-225ENST00000488979 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
SH3YL1-225ENST00000488979 MON2Q7Z3U7 1717 aa14.02□□□□□ -0.16
SH3YL1-225ENST00000488979 MSL1Q68DK7 614 aa14.02□□□□□ -0.17
SH3YL1-225ENST00000488979 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.17
SH3YL1-225ENST00000488979 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.17
SH3YL1-225ENST00000488979 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
SH3YL1-225ENST00000488979 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
SH3YL1-225ENST00000488979 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
SH3YL1-225ENST00000488979 CD163L1Q9NR16 1453 aa14□□□□□ -0.17
SH3YL1-225ENST00000488979 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
SH3YL1-225ENST00000488979 NME9Q86XW9 330 aa14□□□□□ -0.17
SH3YL1-225ENST00000488979 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
SH3YL1-225ENST00000488979 QSER1Q2KHR3 1735 aa13.99□□□□□ -0.17
SH3YL1-225ENST00000488979 CCNL1Q9UK58 526 aaPredicted RBP13.99□□□□□ -0.17
SH3YL1-225ENST00000488979 CD2APQ9Y5K6 639 aa13.99□□□□□ -0.17
SH3YL1-225ENST00000488979 TUBGCP6Q96RT7 1819 aa13.99□□□□□ -0.17
SH3YL1-225ENST00000488979 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
SH3YL1-225ENST00000488979 SLC12A5Q9H2X9 1139 aa13.98□□□□□ -0.17
SH3YL1-225ENST00000488979 ADCY9O60503 1353 aa13.97□□□□□ -0.17
SH3YL1-225ENST00000488979 KIF3CO14782 793 aa13.97□□□□□ -0.17
SH3YL1-225ENST00000488979 DNAJC5GQ8N7S2 189 aa13.97□□□□□ -0.17
SH3YL1-225ENST00000488979 LTV1Q96GA3 475 aaPredicted RBP13.97□□□□□ -0.17
SH3YL1-225ENST00000488979 WWC3Q9ULE0 1092 aa13.97□□□□□ -0.17
SH3YL1-225ENST00000488979 NSD2O96028 1365 aa13.96□□□□□ -0.17
SH3YL1-225ENST00000488979 ANKRD36BQ8N2N9 1353 aa13.96□□□□□ -0.18
SH3YL1-225ENST00000488979 IP6K1Q92551 441 aa13.95□□□□□ -0.18
SH3YL1-225ENST00000488979 PCNTO95613 3336 aa13.94□□□□□ -0.18
SH3YL1-225ENST00000488979 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
SH3YL1-225ENST00000488979 A0A1W2PP64 1363 aa13.94□□□□□ -0.18
SH3YL1-225ENST00000488979 TONSLQ96HA7 1378 aa13.94□□□□□ -0.18
SH3YL1-225ENST00000488979 LTN1O94822 1766 aa13.92□□□□□ -0.18
SH3YL1-225ENST00000488979 FBLN1P23142 703 aa13.92□□□□□ -0.18
SH3YL1-225ENST00000488979 APLP1P51693 650 aa13.92□□□□□ -0.18
SH3YL1-225ENST00000488979 SMIM5Q71RC9 77 aa13.92□□□□□ -0.18
SH3YL1-225ENST00000488979 TESK2Q96S53 571 aa13.92□□□□□ -0.18
SH3YL1-225ENST00000488979 LY75O60449 1722 aa13.92□□□□□ -0.18
SH3YL1-225ENST00000488979 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
SH3YL1-225ENST00000488979 AMIGO3Q86WK7 504 aa13.91□□□□□ -0.18
SH3YL1-225ENST00000488979 USP47Q96K76 1375 aa13.91□□□□□ -0.18
SH3YL1-225ENST00000488979 COG3Q96JB2 828 aa13.9□□□□□ -0.18
SH3YL1-225ENST00000488979 ST20-MTHFSA0A0A6YYL1 179 aa13.89□□□□□ -0.19
SH3YL1-225ENST00000488979 COL13A1Q5TAT6 717 aaPredicted RBP13.89□□□□□ -0.19
SH3YL1-225ENST00000488979 FLAD1Q8NFF5 587 aa13.89□□□□□ -0.19
SH3YL1-225ENST00000488979 FAM208AQ9UK61 1670 aaKnown RBP13.88□□□□□ -0.19
SH3YL1-225ENST00000488979 TOMM70O94826 608 aa13.88□□□□□ -0.19
SH3YL1-225ENST00000488979 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
SH3YL1-225ENST00000488979 HOXC9P31274 260 aa13.87□□□□□ -0.19
SH3YL1-225ENST00000488979 AMPHP49418 695 aa13.87□□□□□ -0.19
SH3YL1-225ENST00000488979 NBPF6Q5VWK0 638 aa13.87□□□□□ -0.19
SH3YL1-225ENST00000488979 NBPF4Q96M43 638 aa13.87□□□□□ -0.19
SH3YL1-225ENST00000488979 CGNL1Q0VF96 1302 aa13.87□□□□□ -0.19
SH3YL1-225ENST00000488979 DOT1LQ8TEK3 1739 aa13.87□□□□□ -0.19
SH3YL1-225ENST00000488979 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
SH3YL1-225ENST00000488979 HMGB2P26583 209 aaKnown RBP13.86□□□□□ -0.19
SH3YL1-225ENST00000488979 HTRA3P83110 453 aa13.86□□□□□ -0.19
SH3YL1-225ENST00000488979 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
SH3YL1-225ENST00000488979 CAPN15O75808 1086 aa13.85□□□□□ -0.19
SH3YL1-225ENST00000488979 PHF14O94880 888 aa13.85□□□□□ -0.19
SH3YL1-225ENST00000488979 MPRIPQ6WCQ1 1025 aa13.85□□□□□ -0.19
SH3YL1-225ENST00000488979 USHBP1Q8N6Y0 703 aa13.85□□□□□ -0.19
SH3YL1-225ENST00000488979 MEGF6O75095 1541 aa13.85□□□□□ -0.19
SH3YL1-225ENST00000488979 NMRK2Q9NPI5 230 aa13.84□□□□□ -0.19
SH3YL1-225ENST00000488979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.83□□□□□ -0.2
SH3YL1-225ENST00000488979 FYB1O15117 783 aa13.83□□□□□ -0.2
SH3YL1-225ENST00000488979 TMF1P82094 1093 aa13.83□□□□□ -0.2
SH3YL1-225ENST00000488979 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
SH3YL1-225ENST00000488979 AK7Q96M32 723 aa13.83□□□□□ -0.2
SH3YL1-225ENST00000488979 KIF24Q5T7B8 1368 aa13.83□□□□□ -0.2
SH3YL1-225ENST00000488979 PALLDQ8WX93 1383 aa13.83□□□□□ -0.2
SH3YL1-225ENST00000488979 RGPD2P0DJD1 1756 aa13.82□□□□□ -0.2
SH3YL1-225ENST00000488979 KLRG1Q96E93 195 aa13.81□□□□□ -0.2
SH3YL1-225ENST00000488979 C5P01031 1676 aa13.81□□□□□ -0.2
SH3YL1-225ENST00000488979 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
SH3YL1-225ENST00000488979 RRS1Q15050 365 aaKnown RBP13.8□□□□□ -0.2
SH3YL1-225ENST00000488979 ARHGAP27Q6ZUM4 889 aa13.8□□□□□ -0.2
SH3YL1-225ENST00000488979 JMYQ8N9B5 988 aa13.8□□□□□ -0.2
SH3YL1-225ENST00000488979 RAPGEF4Q8WZA2 1011 aa13.8□□□□□ -0.2
SH3YL1-225ENST00000488979 BCS1LQ9Y276 419 aa13.8□□□□□ -0.2
SH3YL1-225ENST00000488979 SMG6Q86US8 1419 aaKnown RBP13.8□□□□□ -0.2
SH3YL1-225ENST00000488979 TAF1LQ8IZX4 1826 aa13.79□□□□□ -0.2
SH3YL1-225ENST00000488979 CYP27B1O15528 508 aa13.79□□□□□ -0.2
SH3YL1-225ENST00000488979 TATP17735 454 aaPredicted RBP13.79□□□□□ -0.2
SH3YL1-225ENST00000488979 LINC00116Q8NCU8 138 aa13.79□□□□□ -0.2
SH3YL1-225ENST00000488979 PIGBQ92521 554 aa13.79□□□□□ -0.2
SH3YL1-225ENST00000488979 INSRP06213 1382 aa13.79□□□□□ -0.2
SH3YL1-225ENST00000488979 SSFA2P28290 1259 aa13.78□□□□□ -0.2
SH3YL1-225ENST00000488979 RBM46Q8TBY0 533 aaKnown RBP13.78□□□□□ -0.2
SH3YL1-225ENST00000488979 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
SH3YL1-225ENST00000488979 GGNBP2Q9H3C7 697 aa13.78□□□□□ -0.2
SH3YL1-225ENST00000488979 MMP10P09238 476 aa13.77□□□□□ -0.21
SH3YL1-225ENST00000488979 C4BP0C0L5 1744 aa13.77□□□□□ -0.21
SH3YL1-225ENST00000488979 FLT4P35916 1363 aa13.77□□□□□ -0.21
SH3YL1-225ENST00000488979 PRELPP51888 382 aa13.77□□□□□ -0.21
SH3YL1-225ENST00000488979 TGFB2P61812 414 aa13.77□□□□□ -0.21
SH3YL1-225ENST00000488979 TNS4Q8IZW8 715 aa13.77□□□□□ -0.21
SH3YL1-225ENST00000488979 PCDH11XQ9BZA7 1347 aa13.76□□□□□ -0.21
SH3YL1-225ENST00000488979 PCDH11YQ9BZA8 1340 aa13.76□□□□□ -0.21
SH3YL1-225ENST00000488979 LOC102724428A0A0B4J2F2 783 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms