RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 ST20-MTHFSA0A0A6YYL1 179 aa15.21■□□□□ 0.03
YIPF3-207ENST00000488966 NLGN2Q8NFZ4 835 aa15.21■□□□□ 0.03
YIPF3-207ENST00000488966 TONSLQ96HA7 1378 aa15.21■□□□□ 0.02
YIPF3-207ENST00000488966 SENP3-EIF4A1A0A087X0R7 540 aa15.2■□□□□ 0.02
YIPF3-207ENST00000488966 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
YIPF3-207ENST00000488966 MEGF6O75095 1541 aa15.2■□□□□ 0.02
YIPF3-207ENST00000488966 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
YIPF3-207ENST00000488966 NBPF6Q5VWK0 638 aa15.19■□□□□ 0.02
YIPF3-207ENST00000488966 NBPF4Q96M43 638 aa15.19■□□□□ 0.02
YIPF3-207ENST00000488966 CCNL1Q9UK58 526 aaPredicted RBP15.19■□□□□ 0.02
YIPF3-207ENST00000488966 USHBP1Q8N6Y0 703 aa15.18■□□□□ 0.02
YIPF3-207ENST00000488966 FAM208AQ9UK61 1670 aaKnown RBP15.18■□□□□ 0.02
YIPF3-207ENST00000488966 COL23A1Q86Y22 540 aaPredicted RBP15.17■□□□□ 0.02
YIPF3-207ENST00000488966 KAT6BQ8WYB5 2073 aa15.16■□□□□ 0.02
YIPF3-207ENST00000488966 USP47Q96K76 1375 aa15.16■□□□□ 0.02
YIPF3-207ENST00000488966 FYB1O15117 783 aa15.16■□□□□ 0.02
YIPF3-207ENST00000488966 MSH5O43196 834 aa15.16■□□□□ 0.02
YIPF3-207ENST00000488966 GGNBP2Q9H3C7 697 aa15.16■□□□□ 0.02
YIPF3-207ENST00000488966 QSER1Q2KHR3 1735 aa15.15■□□□□ 0.02
YIPF3-207ENST00000488966 DOT1LQ8TEK3 1739 aa15.15■□□□□ 0.02
YIPF3-207ENST00000488966 RTL1A6NKG5 1358 aa15.15■□□□□ 0.02
YIPF3-207ENST00000488966 YBX3P16989 372 aaKnown RBP eCLIP15.15■□□□□ 0.02
YIPF3-207ENST00000488966 COL24A1Q17RW2 1714 aa15.14■□□□□ 0.01
YIPF3-207ENST00000488966 CHD4Q14839 1912 aa15.14■□□□□ 0.01
YIPF3-207ENST00000488966 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
YIPF3-207ENST00000488966 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
YIPF3-207ENST00000488966 CGNL1Q0VF96 1302 aa15.14■□□□□ 0.01
YIPF3-207ENST00000488966 LY75O60449 1722 aa15.13■□□□□ 0.01
YIPF3-207ENST00000488966 SLC24A1O60721 1099 aa15.13■□□□□ 0.01
YIPF3-207ENST00000488966 GIGYF1O75420 1035 aaPredicted RBP15.13■□□□□ 0.01
YIPF3-207ENST00000488966 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
YIPF3-207ENST00000488966 SHANK3Q9BYB0 1731 aa15.13■□□□□ 0.01
YIPF3-207ENST00000488966 TUBGCP6Q96RT7 1819 aa15.13■□□□□ 0.01
YIPF3-207ENST00000488966 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
YIPF3-207ENST00000488966 RGPD2P0DJD1 1756 aa15.11■□□□□ 0.01
YIPF3-207ENST00000488966 GRIN3BO60391 1043 aa15.11■□□□□ 0.01
YIPF3-207ENST00000488966 INSRP06213 1382 aa15.11■□□□□ 0.01
YIPF3-207ENST00000488966 SMG6Q86US8 1419 aaKnown RBP15.1■□□□□ 0.01
YIPF3-207ENST00000488966 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
YIPF3-207ENST00000488966 PCDH11XQ9BZA7 1347 aa15.1■□□□□ 0.01
YIPF3-207ENST00000488966 PCDH11YQ9BZA8 1340 aa15.1■□□□□ 0.01
YIPF3-207ENST00000488966 PALLDQ8WX93 1383 aa15.1■□□□□ 0.01
YIPF3-207ENST00000488966 CYP27B1O15528 508 aa15.09■□□□□ 0.01
YIPF3-207ENST00000488966 TMF1P82094 1093 aa15.09■□□□□ 0.01
YIPF3-207ENST00000488966 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
YIPF3-207ENST00000488966 CD2APQ9Y5K6 639 aa15.08■□□□□ 0
YIPF3-207ENST00000488966 FLT4P35916 1363 aa15.08■□□□□ 0
YIPF3-207ENST00000488966 FLAD1Q8NFF5 587 aa15.07■□□□□ 0
YIPF3-207ENST00000488966 GOLGB1Q14789 3259 aaKnown RBP15.06■□□□□ 0
YIPF3-207ENST00000488966 SMIM5Q71RC9 77 aa15.06■□□□□ 0
YIPF3-207ENST00000488966 CARD14Q9BXL6 1004 aa15.06■□□□□ 0
YIPF3-207ENST00000488966 EMILIN1Q9Y6C2 1016 aa15.06■□□□□ 0
YIPF3-207ENST00000488966 KIF24Q5T7B8 1368 aa15.06■□□□□ 0
YIPF3-207ENST00000488966 PIGBQ92521 554 aa15.05■□□□□ -0
YIPF3-207ENST00000488966 SMARCC1Q92922 1105 aaPredicted RBP15.05■□□□□ -0
YIPF3-207ENST00000488966 ATP10DQ9P241 1426 aa15.04■□□□□ -0
YIPF3-207ENST00000488966 HMGB2P26583 209 aaKnown RBP15.04■□□□□ -0
YIPF3-207ENST00000488966 AK7Q96M32 723 aa15.04■□□□□ -0
YIPF3-207ENST00000488966 C5P01031 1676 aa15.03■□□□□ -0
YIPF3-207ENST00000488966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.03■□□□□ -0
YIPF3-207ENST00000488966 PHF14O94880 888 aa15.03■□□□□ -0
YIPF3-207ENST00000488966 PPM1GO15355 546 aaPredicted RBP15.02■□□□□ -0
YIPF3-207ENST00000488966 NKX1-1Q15270 411 aaPredicted RBP15.02■□□□□ -0
YIPF3-207ENST00000488966 CDCA8Q53HL2 280 aa15.02■□□□□ -0
YIPF3-207ENST00000488966 LOC102724428A0A0B4J2F2 783 aa15.01□□□□□ -0.01
YIPF3-207ENST00000488966 SIK1P57059 783 aa15.01□□□□□ -0.01
YIPF3-207ENST00000488966 LINC00116Q8NCU8 138 aa15.01□□□□□ -0.01
YIPF3-207ENST00000488966 WWC3Q9ULE0 1092 aa15.01□□□□□ -0.01
YIPF3-207ENST00000488966 NCAPD2Q15021 1401 aa15□□□□□ -0.01
YIPF3-207ENST00000488966 NSD3Q9BZ95 1437 aa15□□□□□ -0.01
YIPF3-207ENST00000488966 C4BP0C0L5 1744 aa15□□□□□ -0.01
YIPF3-207ENST00000488966 TOGARAM1Q9Y4F4 1720 aa15□□□□□ -0.01
YIPF3-207ENST00000488966 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
YIPF3-207ENST00000488966 GPBP1L1Q9HC44 474 aaPredicted RBP15□□□□□ -0.01
YIPF3-207ENST00000488966 SPG7Q9UQ90 795 aa15□□□□□ -0.01
YIPF3-207ENST00000488966 ADCY9O60503 1353 aa14.99□□□□□ -0.01
YIPF3-207ENST00000488966 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
YIPF3-207ENST00000488966 ITPK1Q13572 414 aa14.99□□□□□ -0.01
YIPF3-207ENST00000488966 ZNF526Q8TF50 670 aaPredicted RBP14.99□□□□□ -0.01
YIPF3-207ENST00000488966 EYA1Q99502 592 aa14.99□□□□□ -0.01
YIPF3-207ENST00000488966 ASAP1Q9ULH1 1129 aa14.99□□□□□ -0.01
YIPF3-207ENST00000488966 SSFA2P28290 1259 aa14.98□□□□□ -0.01
YIPF3-207ENST00000488966 TMOD3Q9NYL9 352 aa14.98□□□□□ -0.01
YIPF3-207ENST00000488966 TAF1LQ8IZX4 1826 aa14.97□□□□□ -0.01
YIPF3-207ENST00000488966 GNPATO15228 680 aa14.97□□□□□ -0.01
YIPF3-207ENST00000488966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.97□□□□□ -0.01
YIPF3-207ENST00000488966 PKD1L3Q7Z443 1732 aa14.97□□□□□ -0.01
YIPF3-207ENST00000488966 KIF20BQ96Q89 1820 aa14.96□□□□□ -0.01
YIPF3-207ENST00000488966 PHKG2P15735 406 aa14.96□□□□□ -0.01
YIPF3-207ENST00000488966 ATP6V1AP38606 617 aa14.96□□□□□ -0.01
YIPF3-207ENST00000488966 POLKQ9UBT6 870 aa14.96□□□□□ -0.01
YIPF3-207ENST00000488966 IFFO2Q5TF58 517 aa14.95□□□□□ -0.02
YIPF3-207ENST00000488966 IFNL2Q8IZJ0 200 aa14.95□□□□□ -0.02
YIPF3-207ENST00000488966 ATG3Q9NT62 314 aa14.95□□□□□ -0.02
YIPF3-207ENST00000488966 ITGB4P16144 1822 aa14.94□□□□□ -0.02
YIPF3-207ENST00000488966 UBR3Q6ZT12 1888 aa14.93□□□□□ -0.02
YIPF3-207ENST00000488966 MMP10P09238 476 aa14.93□□□□□ -0.02
YIPF3-207ENST00000488966 HSPA6P17066 643 aa14.93□□□□□ -0.02
YIPF3-207ENST00000488966 EIF4A2Q14240 407 aaKnown RBP14.93□□□□□ -0.02
YIPF3-207ENST00000488966 MAP2P11137 1827 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms