RNA–Protein interactions for RNA: ENST00000488943.1

REPIN1-213, Transcript of replication initiator 1, humanhuman

TSL 5

Gene REPIN1, Length 1,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-213ENST00000488943 IP6K1Q92551 441 aa28.89■■■□□ 2.22
REPIN1-213ENST00000488943 YBX3P16989 372 aaKnown RBP eCLIP28.88■■■□□ 2.211e-11■□□□□ 10.7
REPIN1-213ENST00000488943 CCNL1Q9UK58 526 aaPredicted RBP28.88■■■□□ 2.21
REPIN1-213ENST00000488943 GOLGB1Q14789 3259 aaKnown RBP28.88■■■□□ 2.21
REPIN1-213ENST00000488943 TERF2IPQ9NYB0 399 aa28.86■■■□□ 2.21
REPIN1-213ENST00000488943 SLC12A5Q9H2X9 1139 aa28.85■■■□□ 2.21
REPIN1-213ENST00000488943 NEUROD1Q13562 356 aa28.84■■■□□ 2.21
REPIN1-213ENST00000488943 SIN3AQ96ST3 1273 aa28.84■■■□□ 2.21
REPIN1-213ENST00000488943 ATP10DQ9P241 1426 aa28.83■■■□□ 2.21
REPIN1-213ENST00000488943 COL23A1Q86Y22 540 aaPredicted RBP28.82■■■□□ 2.2
REPIN1-213ENST00000488943 ZCRB1Q8TBF4 217 aaKnown RBP28.82■■■□□ 2.2
REPIN1-213ENST00000488943 USP47Q96K76 1375 aa28.82■■■□□ 2.2
REPIN1-213ENST00000488943 NSD2O96028 1365 aa28.81■■■□□ 2.2
REPIN1-213ENST00000488943 A0A1W2PP64 1363 aa28.8■■■□□ 2.2
REPIN1-213ENST00000488943 MSL1Q68DK7 614 aa28.8■■■□□ 2.2
REPIN1-213ENST00000488943 GPBP1L1Q9HC44 474 aaPredicted RBP28.8■■■□□ 2.2
REPIN1-213ENST00000488943 CEP350Q5VT06 3117 aa28.8■■■□□ 2.2
REPIN1-213ENST00000488943 AMPHP49418 695 aa28.78■■■□□ 2.2
REPIN1-213ENST00000488943 CARD11Q9BXL7 1154 aa28.78■■■□□ 2.2
REPIN1-213ENST00000488943 HMGB2P26583 209 aaKnown RBP28.77■■■□□ 2.2
REPIN1-213ENST00000488943 COG3Q96JB2 828 aa28.76■■■□□ 2.19
REPIN1-213ENST00000488943 HOXC9P31274 260 aa28.75■■■□□ 2.19
REPIN1-213ENST00000488943 CD2APQ9Y5K6 639 aa28.75■■■□□ 2.19
REPIN1-213ENST00000488943 RGPD2P0DJD1 1756 aa28.74■■■□□ 2.19
REPIN1-213ENST00000488943 MEGF6O75095 1541 aa28.74■■■□□ 2.19
REPIN1-213ENST00000488943 MAP3K19Q56UN5 1328 aa28.73■■■□□ 2.19
REPIN1-213ENST00000488943 FLAD1Q8NFF5 587 aa28.73■■■□□ 2.19
REPIN1-213ENST00000488943 C5P01031 1676 aa28.73■■■□□ 2.19
REPIN1-213ENST00000488943 HSPA6P17066 643 aa28.71■■■□□ 2.19
REPIN1-213ENST00000488943 ZNF526Q8TF50 670 aaPredicted RBP28.71■■■□□ 2.19
REPIN1-213ENST00000488943 PUS7Q96PZ0 661 aaKnown RBP28.69■■■□□ 2.18
REPIN1-213ENST00000488943 CGNL1Q0VF96 1302 aa28.69■■■□□ 2.18
REPIN1-213ENST00000488943 RAPGEF4Q8WZA2 1011 aa28.68■■■□□ 2.18
REPIN1-213ENST00000488943 ADCY9O60503 1353 aa28.65■■■□□ 2.18
REPIN1-213ENST00000488943 FBLN1P23142 703 aa28.65■■■□□ 2.18
REPIN1-213ENST00000488943 SMG6Q86US8 1419 aaKnown RBP28.65■■■□□ 2.18
REPIN1-213ENST00000488943 RTL1A6NKG5 1358 aa28.64■■■□□ 2.18
REPIN1-213ENST00000488943 TATP17735 454 aaPredicted RBP28.64■■■□□ 2.18
REPIN1-213ENST00000488943 NBPF6Q5VWK0 638 aa28.64■■■□□ 2.18
REPIN1-213ENST00000488943 NBPF4Q96M43 638 aa28.64■■■□□ 2.18
REPIN1-213ENST00000488943 TAF1LQ8IZX4 1826 aa28.64■■■□□ 2.17
REPIN1-213ENST00000488943 PALLDQ8WX93 1383 aa28.63■■■□□ 2.17
REPIN1-213ENST00000488943 USHBP1Q8N6Y0 703 aa28.63■■■□□ 2.17
REPIN1-213ENST00000488943 AK7Q96M32 723 aa28.62■■■□□ 2.17
REPIN1-213ENST00000488943 PCDH11XQ9BZA7 1347 aa28.62■■■□□ 2.17
REPIN1-213ENST00000488943 PCDH11YQ9BZA8 1340 aa28.62■■■□□ 2.17
REPIN1-213ENST00000488943 MPRIPQ6WCQ1 1025 aa28.61■■■□□ 2.17
REPIN1-213ENST00000488943 IGSF1Q8N6C5 1336 aa28.61■■■□□ 2.17
REPIN1-213ENST00000488943 RRS1Q15050 365 aaKnown RBP28.59■■■□□ 2.17
REPIN1-213ENST00000488943 WWC3Q9ULE0 1092 aa28.59■■■□□ 2.17
REPIN1-213ENST00000488943 C4BP0C0L5 1744 aa28.59■■■□□ 2.17
REPIN1-213ENST00000488943 SMARCC1Q92922 1105 aaPredicted RBP28.58■■■□□ 2.17
REPIN1-213ENST00000488943 PHF14O94880 888 aa28.57■■■□□ 2.16
REPIN1-213ENST00000488943 NSD3Q9BZ95 1437 aa28.57■■■□□ 2.16
REPIN1-213ENST00000488943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.52■■■□□ 2.16
REPIN1-213ENST00000488943 SLC24A1O60721 1099 aa28.52■■■□□ 2.16
REPIN1-213ENST00000488943 UBR3Q6ZT12 1888 aa28.51■■■□□ 2.15
REPIN1-213ENST00000488943 ITGB4P16144 1822 aa28.51■■■□□ 2.15
REPIN1-213ENST00000488943 TOGARAM1Q9Y4F4 1720 aa28.5■■■□□ 2.15
REPIN1-213ENST00000488943 GGNBP2Q9H3C7 697 aa28.5■■■□□ 2.15
REPIN1-213ENST00000488943 KIF3CO14782 793 aa28.49■■■□□ 2.15
REPIN1-213ENST00000488943 SSFA2P28290 1259 aa28.49■■■□□ 2.15
REPIN1-213ENST00000488943 INSRP06213 1382 aa28.49■■■□□ 2.15
REPIN1-213ENST00000488943 CYP27B1O15528 508 aa28.48■■■□□ 2.15
REPIN1-213ENST00000488943 HSP90AB2PQ58FF8 381 aa28.48■■■□□ 2.15
REPIN1-213ENST00000488943 AMIGO3Q86WK7 504 aa28.48■■■□□ 2.15
REPIN1-213ENST00000488943 TONSLQ96HA7 1378 aa28.48■■■□□ 2.15
REPIN1-213ENST00000488943 ST20-MTHFSA0A0A6YYL1 179 aa28.47■■■□□ 2.15
REPIN1-213ENST00000488943 FYB1O15117 783 aa28.47■■■□□ 2.15
REPIN1-213ENST00000488943 APLP1P51693 650 aa28.47■■■□□ 2.15
REPIN1-213ENST00000488943 TESK2Q96S53 571 aa28.47■■■□□ 2.15
REPIN1-213ENST00000488943 SMIM5Q71RC9 77 aa28.46■■■□□ 2.15
REPIN1-213ENST00000488943 FLT4P35916 1363 aa28.46■■■□□ 2.15
REPIN1-213ENST00000488943 PIGBQ92521 554 aa28.44■■■□□ 2.14
REPIN1-213ENST00000488943 KIF24Q5T7B8 1368 aa28.42■■■□□ 2.14
REPIN1-213ENST00000488943 LOC102724428A0A0B4J2F2 783 aa28.42■■■□□ 2.14
REPIN1-213ENST00000488943 SIK1P57059 783 aa28.42■■■□□ 2.14
REPIN1-213ENST00000488943 CICQ96RK0 1608 aaPredicted RBP28.42■■■□□ 2.14
REPIN1-213ENST00000488943 PKD1L3Q7Z443 1732 aa28.41■■■□□ 2.14
REPIN1-213ENST00000488943 GNPATO15228 680 aa28.41■■■□□ 2.14
REPIN1-213ENST00000488943 LINC00116Q8NCU8 138 aa28.41■■■□□ 2.14
REPIN1-213ENST00000488943 SPG7Q9UQ90 795 aa28.4■■■□□ 2.14
REPIN1-213ENST00000488943 KIF20BQ96Q89 1820 aa28.4■■■□□ 2.14
REPIN1-213ENST00000488943 TOMM70O94826 608 aa28.39■■■□□ 2.14
REPIN1-213ENST00000488943 TMOD3Q9NYL9 352 aa28.39■■■□□ 2.14
REPIN1-213ENST00000488943 MAP2P11137 1827 aaKnown RBP28.38■■■□□ 2.13
REPIN1-213ENST00000488943 MMP10P09238 476 aa28.37■■■□□ 2.13
REPIN1-213ENST00000488943 ATP6V1AP38606 617 aa28.37■■■□□ 2.13
REPIN1-213ENST00000488943 NKX1-1Q15270 411 aaPredicted RBP28.37■■■□□ 2.13
REPIN1-213ENST00000488943 BCS1LQ9Y276 419 aa28.37■■■□□ 2.13
REPIN1-213ENST00000488943 TGFB2P61812 414 aa28.35■■■□□ 2.13
REPIN1-213ENST00000488943 TMF1P82094 1093 aa28.35■■■□□ 2.13
REPIN1-213ENST00000488943 PXDNLA1KZ92 1463 aa28.34■■■□□ 2.13
REPIN1-213ENST00000488943 N4BP2Q86UW6 1770 aaPredicted RBP28.33■■■□□ 2.13
REPIN1-213ENST00000488943 ARHGAP27Q6ZUM4 889 aa28.33■■■□□ 2.13
REPIN1-213ENST00000488943 KIF13BQ9NQT8 1826 aa28.33■■■□□ 2.13
REPIN1-213ENST00000488943 PPM1GO15355 546 aaPredicted RBP28.32■■■□□ 2.12
REPIN1-213ENST00000488943 ITPK1Q13572 414 aa28.32■■■□□ 2.12
REPIN1-213ENST00000488943 ASAP1Q9ULH1 1129 aa28.32■■■□□ 2.12
REPIN1-213ENST00000488943 EMILIN1Q9Y6C2 1016 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms