RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 NUP188Q5SRE5 1749 aa30.59■■■□□ 2.49
VAMP2-204ENST00000488857 ZCRB1Q8TBF4 217 aaKnown RBP30.59■■■□□ 2.49
VAMP2-204ENST00000488857 RAPGEF4Q8WZA2 1011 aa30.59■■■□□ 2.49
VAMP2-204ENST00000488857 SRCAPQ6ZRS2 3230 aa30.59■■■□□ 2.49
VAMP2-204ENST00000488857 NPC1L1Q9UHC9 1359 aa30.57■■■□□ 2.48
VAMP2-204ENST00000488857 DDX54Q8TDD1 881 aaKnown RBP30.56■■■□□ 2.48
VAMP2-204ENST00000488857 TATP17735 454 aaPredicted RBP30.55■■■□□ 2.48
VAMP2-204ENST00000488857 PKD1L3Q7Z443 1732 aa30.54■■■□□ 2.48
VAMP2-204ENST00000488857 KCNQ2O43526 872 aa30.54■■■□□ 2.48
VAMP2-204ENST00000488857 EIF4A2Q14240 407 aaKnown RBP30.54■■■□□ 2.48
VAMP2-204ENST00000488857 EYA1Q99502 592 aa30.54■■■□□ 2.48
VAMP2-204ENST00000488857 KAT6BQ8WYB5 2073 aa30.51■■■□□ 2.48
VAMP2-204ENST00000488857 ACSBG1Q96GR2 724 aa30.51■■■□□ 2.47
VAMP2-204ENST00000488857 BTAF1O14981 1849 aa30.51■■■□□ 2.47
VAMP2-204ENST00000488857 PLEKHG2Q9H7P9 1386 aa30.5■■■□□ 2.47
VAMP2-204ENST00000488857 DOT1LQ8TEK3 1739 aa30.49■■■□□ 2.47
VAMP2-204ENST00000488857 PCDH11XQ9BZA7 1347 aa30.48■■■□□ 2.47
VAMP2-204ENST00000488857 PCDH11YQ9BZA8 1340 aa30.48■■■□□ 2.47
VAMP2-204ENST00000488857 IGSF1Q8N6C5 1336 aa30.47■■■□□ 2.47
VAMP2-204ENST00000488857 CC2D1BQ5T0F9 858 aaKnown RBP30.46■■■□□ 2.47
VAMP2-204ENST00000488857 PROM2Q8N271 834 aa30.46■■■□□ 2.47
VAMP2-204ENST00000488857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.45■■■□□ 2.47
VAMP2-204ENST00000488857 PSDA5PKW4 1024 aaPredicted RBP30.44■■■□□ 2.46
VAMP2-204ENST00000488857 R3HDM1Q15032 1099 aaKnown RBP30.43■■■□□ 2.46
VAMP2-204ENST00000488857 NBPF14Q5TI25 921 aa30.43■■■□□ 2.46
VAMP2-204ENST00000488857 TXNRD1Q16881 649 aa30.42■■■□□ 2.46
VAMP2-204ENST00000488857 CYP27B1O15528 508 aa30.41■■■□□ 2.46
VAMP2-204ENST00000488857 SPG7Q9UQ90 795 aa30.41■■■□□ 2.46
VAMP2-204ENST00000488857 MTHFSP49914 203 aa30.4■■■□□ 2.46
VAMP2-204ENST00000488857 PRIM1P49642 420 aaKnown RBP30.39■■■□□ 2.46
VAMP2-204ENST00000488857 LRP5O75197 1615 aa30.38■■■□□ 2.45
VAMP2-204ENST00000488857 IL13P35225 146 aa30.38■■■□□ 2.45
VAMP2-204ENST00000488857 NKX1-1Q15270 411 aaPredicted RBP30.37■■■□□ 2.45
VAMP2-204ENST00000488857 KDRP35968 1356 aa30.36■■■□□ 2.45
VAMP2-204ENST00000488857 TOGARAM1Q9Y4F4 1720 aa30.36■■■□□ 2.45
VAMP2-204ENST00000488857 SYTL4Q96C24 671 aaPredicted RBP30.35■■■□□ 2.45
VAMP2-204ENST00000488857 LY75O60449 1722 aa30.33■■■□□ 2.45
VAMP2-204ENST00000488857 PAPPAQ13219 1627 aa30.33■■■□□ 2.45
VAMP2-204ENST00000488857 ANO8Q9HCE9 1232 aaPredicted RBP30.33■■■□□ 2.45
VAMP2-204ENST00000488857 ITGB4P16144 1822 aa30.31■■■□□ 2.44
VAMP2-204ENST00000488857 AEBP1Q8IUX7 1158 aa30.3■■■□□ 2.44
VAMP2-204ENST00000488857 IFNL2Q8IZJ0 200 aa30.3■■■□□ 2.44
VAMP2-204ENST00000488857 COL3A1P02461 1466 aaPredicted RBP30.3■■■□□ 2.44
VAMP2-204ENST00000488857 PHKG2P15735 406 aa30.29■■■□□ 2.44
VAMP2-204ENST00000488857 SLC27A3Q5K4L6 730 aa30.29■■■□□ 2.44
VAMP2-204ENST00000488857 SULT6B1Q6IMI4 303 aa30.28■■■□□ 2.44
VAMP2-204ENST00000488857 AMOTQ4VCS5 1084 aa30.27■■■□□ 2.44
VAMP2-204ENST00000488857 DIAPH1O60610 1272 aaKnown RBP30.26■■■□□ 2.43
VAMP2-204ENST00000488857 PLEKHO1Q53GL0 409 aaPredicted RBP30.26■■■□□ 2.43
VAMP2-204ENST00000488857 LRRC4BQ9NT99 713 aa30.26■■■□□ 2.43
VAMP2-204ENST00000488857 CASZ1Q86V15 1759 aa30.26■■■□□ 2.43
VAMP2-204ENST00000488857 CNGB1Q14028 1251 aaPredicted RBP30.25■■■□□ 2.43
VAMP2-204ENST00000488857 STK32BQ9NY57 414 aa30.25■■■□□ 2.43
VAMP2-204ENST00000488857 SLC15A2Q16348 729 aa30.24■■■□□ 2.43
VAMP2-204ENST00000488857 MPRIPQ6WCQ1 1025 aa30.22■■■□□ 2.43
VAMP2-204ENST00000488857 HSP90AB1P08238 724 aaKnown RBP30.2■■■□□ 2.43
VAMP2-204ENST00000488857 ZNF530Q6P9A1 599 aaPredicted RBP30.19■■■□□ 2.42
VAMP2-204ENST00000488857 PIGBQ92521 554 aa30.19■■■□□ 2.42
VAMP2-204ENST00000488857 PPP2R1AP30153 589 aa30.18■■■□□ 2.42
VAMP2-204ENST00000488857 ZEB1P37275 1124 aaPredicted RBP30.18■■■□□ 2.42
VAMP2-204ENST00000488857 DCAF5Q96JK2 942 aa30.18■■■□□ 2.42
VAMP2-204ENST00000488857 PALLDQ8WX93 1383 aa30.17■■■□□ 2.42
VAMP2-204ENST00000488857 QSER1Q2KHR3 1735 aa30.17■■■□□ 2.42
VAMP2-204ENST00000488857 SMARCC1Q92922 1105 aaPredicted RBP30.16■■■□□ 2.42
VAMP2-204ENST00000488857 AKT1S1Q96B36 256 aa30.16■■■□□ 2.42
VAMP2-204ENST00000488857 TMOD3Q9NYL9 352 aa30.16■■■□□ 2.42
VAMP2-204ENST00000488857 CCNL1Q9UK58 526 aaPredicted RBP30.16■■■□□ 2.42
VAMP2-204ENST00000488857 KDM6AO15550 1401 aaPredicted RBP30.15■■■□□ 2.42
VAMP2-204ENST00000488857 ERVV-2B6SEH9 535 aa30.15■■■□□ 2.42
VAMP2-204ENST00000488857 HMOX1P09601 288 aa30.15■■■□□ 2.42
VAMP2-204ENST00000488857 ZNF827Q17R98 1081 aa30.15■■■□□ 2.42
VAMP2-204ENST00000488857 CFAP53Q96M91 514 aa30.15■■■□□ 2.42
VAMP2-204ENST00000488857 C1orf141Q5JVX7 400 aa30.13■■■□□ 2.41
VAMP2-204ENST00000488857 C5P01031 1676 aa30.13■■■□□ 2.41
VAMP2-204ENST00000488857 TAF1LQ8IZX4 1826 aa30.12■■■□□ 2.41
VAMP2-204ENST00000488857 HMGB2P26583 209 aaKnown RBP30.12■■■□□ 2.41
VAMP2-204ENST00000488857 KCNQ4P56696 695 aa30.12■■■□□ 2.41
VAMP2-204ENST00000488857 PDGFDQ9GZP0 370 aaPredicted RBP30.12■■■□□ 2.41
VAMP2-204ENST00000488857 SPON1Q9HCB6 807 aa30.11■■■□□ 2.41
VAMP2-204ENST00000488857 SCN11AQ9UI33 1791 aa30.1■■■□□ 2.41
VAMP2-204ENST00000488857 TUBGCP6Q96RT7 1819 aa30.1■■■□□ 2.41
VAMP2-204ENST00000488857 U2SURPO15042 1029 aaKnown RBP30.08■■■□□ 2.41
VAMP2-204ENST00000488857 AKAP4Q5JQC9 854 aa30.08■■■□□ 2.41
VAMP2-204ENST00000488857 ASAP1Q9ULH1 1129 aa30.06■■■□□ 2.4
VAMP2-204ENST00000488857 ADAMTS7Q9UKP4 1686 aa30.06■■■□□ 2.4
VAMP2-204ENST00000488857 ATG3Q9NT62 314 aa30.05■■■□□ 2.4
VAMP2-204ENST00000488857 ZNF831Q5JPB2 1677 aa30.04■■■□□ 2.4
VAMP2-204ENST00000488857 VIRMAQ69YN4 1812 aaKnown RBP30.04■■■□□ 2.4
VAMP2-204ENST00000488857 DDX10Q13206 875 aaKnown RBP30.04■■■□□ 2.4
VAMP2-204ENST00000488857 MTHFSDQ2M296 383 aaKnown RBP30.04■■■□□ 2.4
VAMP2-204ENST00000488857 NUDCQ9Y266 331 aa30.04■■■□□ 2.4
VAMP2-204ENST00000488857 LOC102724428A0A0B4J2F2 783 aa30.03■■■□□ 2.4
VAMP2-204ENST00000488857 SIK1P57059 783 aa30.03■■■□□ 2.4
VAMP2-204ENST00000488857 CABP4P57796 275 aa30.03■■■□□ 2.4
VAMP2-204ENST00000488857 TFCP2L1Q9NZI6 479 aa30.03■■■□□ 2.4
VAMP2-204ENST00000488857 C4BP0C0L5 1744 aa30.02■■■□□ 2.4
VAMP2-204ENST00000488857 PNPLA7Q6ZV29 1317 aa30.02■■■□□ 2.4
VAMP2-204ENST00000488857 ZBTB7AO95365 584 aa30.02■■■□□ 2.4
VAMP2-204ENST00000488857 MTFR1LQ9H019 292 aa30.02■■■□□ 2.4
VAMP2-204ENST00000488857 MRC1P22897 1456 aa30.01■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms