RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TSHZ3Q63HK5 1081 aa19.55■□□□□ 0.72
MCF2L-229ENST00000488765 IQGAP3Q86VI3 1631 aa19.55■□□□□ 0.72
MCF2L-229ENST00000488765 TMX3Q96JJ7 454 aa19.55■□□□□ 0.72
MCF2L-229ENST00000488765 UPF3BQ9BZI7 483 aaKnown RBP19.55■□□□□ 0.72
MCF2L-229ENST00000488765 IRX3P78415 501 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-229ENST00000488765 CWC22Q9HCG8 908 aaKnown RBP19.53■□□□□ 0.72
MCF2L-229ENST00000488765 SCAF11Q99590 1463 aaKnown RBP19.53■□□□□ 0.72
MCF2L-229ENST00000488765 PLXNC1O60486 1568 aa19.53■□□□□ 0.72
MCF2L-229ENST00000488765 FEZ1Q99689 392 aa19.53■□□□□ 0.72
MCF2L-229ENST00000488765 GGNBP2Q9H3C7 697 aa19.53■□□□□ 0.72
MCF2L-229ENST00000488765 NRBP1Q9UHY1 535 aa19.53■□□□□ 0.72
MCF2L-229ENST00000488765 TNNT3P45378 269 aaPredicted RBP19.53■□□□□ 0.72
MCF2L-229ENST00000488765 SPTLC3Q9NUV7 552 aa19.53■□□□□ 0.72
MCF2L-229ENST00000488765 SYAP1Q96A49 352 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-229ENST00000488765 THUMPD2Q9BTF0 503 aaKnown RBP19.52■□□□□ 0.72
MCF2L-229ENST00000488765 FIBPO43427 364 aa19.52■□□□□ 0.72
MCF2L-229ENST00000488765 CNPY2Q9Y2B0 182 aa19.52■□□□□ 0.72
MCF2L-229ENST00000488765 CCDC66A2RUB6 948 aa19.51■□□□□ 0.71
MCF2L-229ENST00000488765 SYTL4Q96C24 671 aaPredicted RBP19.51■□□□□ 0.71
MCF2L-229ENST00000488765 KDM4AO75164 1064 aa19.51■□□□□ 0.71
MCF2L-229ENST00000488765 DNAJC2Q99543 621 aaKnown RBP19.51■□□□□ 0.71
MCF2L-229ENST00000488765 PLEKHM2Q8IWE5 1019 aa19.51■□□□□ 0.71
MCF2L-229ENST00000488765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
MCF2L-229ENST00000488765 ESF1Q9H501 851 aaKnown RBP19.51■□□□□ 0.71
MCF2L-229ENST00000488765 VGFO15240 615 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-229ENST00000488765 TNNT1P13805 278 aa19.5■□□□□ 0.71
MCF2L-229ENST00000488765 GTF3C6Q969F1 213 aa19.5■□□□□ 0.71
MCF2L-229ENST00000488765 DDX41Q9UJV9 622 aaKnown RBP19.5■□□□□ 0.71
MCF2L-229ENST00000488765 CLTCL1P53675 1640 aa19.5■□□□□ 0.71
MCF2L-229ENST00000488765 PRDM15P57071 1507 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-229ENST00000488765 NPATQ14207 1427 aa19.5■□□□□ 0.71
MCF2L-229ENST00000488765 ZNF518AQ6AHZ1 1483 aa19.49■□□□□ 0.71
MCF2L-229ENST00000488765 SECISBP2LQ93073 1101 aaKnown RBP19.49■□□□□ 0.71
MCF2L-229ENST00000488765 SDSP20132 328 aa19.49■□□□□ 0.71
MCF2L-229ENST00000488765 CCDC186Q7Z3E2 898 aa19.49■□□□□ 0.71
MCF2L-229ENST00000488765 KIF18AQ8NI77 898 aa19.49■□□□□ 0.71
MCF2L-229ENST00000488765 PPIP5K1Q6PFW1 1433 aa19.48■□□□□ 0.71
MCF2L-229ENST00000488765 CAMK4Q16566 473 aa19.48■□□□□ 0.71
MCF2L-229ENST00000488765 PRAM1Q96QH2 718 aa19.48■□□□□ 0.71
MCF2L-229ENST00000488765 YEATS2Q9ULM3 1422 aa19.48■□□□□ 0.71
MCF2L-229ENST00000488765 IPO8O15397 1037 aaKnown RBP19.48■□□□□ 0.71
MCF2L-229ENST00000488765 NGEFQ8N5V2 710 aa19.48■□□□□ 0.71
MCF2L-229ENST00000488765 ZBTB7BO15156 539 aaPredicted RBP19.47■□□□□ 0.71
MCF2L-229ENST00000488765 HNRNPH2P55795 449 aaKnown RBP19.47■□□□□ 0.71
MCF2L-229ENST00000488765 WAPLQ7Z5K2 1190 aa19.47■□□□□ 0.71
MCF2L-229ENST00000488765 C14orf93Q9H972 538 aaKnown RBP19.47■□□□□ 0.71
MCF2L-229ENST00000488765 CTIFO43310 598 aaKnown RBP19.47■□□□□ 0.71
MCF2L-229ENST00000488765 KMT5BQ4FZB7 885 aa19.47■□□□□ 0.71
MCF2L-229ENST00000488765 PTPRTO14522 1441 aa19.47■□□□□ 0.71
MCF2L-229ENST00000488765 GABPB1Q06547 395 aaPredicted RBP19.46■□□□□ 0.71
MCF2L-229ENST00000488765 CCDC112Q8NEF3 446 aa19.46■□□□□ 0.71
MCF2L-229ENST00000488765 TPD52L1Q16890 204 aaPredicted RBP19.46■□□□□ 0.7
MCF2L-229ENST00000488765 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.7
MCF2L-229ENST00000488765 POLR3GO15318 223 aaPredicted RBP19.45■□□□□ 0.7
MCF2L-229ENST00000488765 SOX12O15370 315 aa19.45■□□□□ 0.7
MCF2L-229ENST00000488765 PHF14O94880 888 aa19.45■□□□□ 0.7
MCF2L-229ENST00000488765 KRT222Q8N1A0 295 aa19.45■□□□□ 0.7
MCF2L-229ENST00000488765 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
MCF2L-229ENST00000488765 BRD1O95696 1058 aa19.45■□□□□ 0.7
MCF2L-229ENST00000488765 INTS3Q68E01 1043 aaKnown RBP19.45■□□□□ 0.7
MCF2L-229ENST00000488765 TSPYL6Q8N831 410 aa19.44■□□□□ 0.7
MCF2L-229ENST00000488765 GCC1Q96CN9 775 aa19.44■□□□□ 0.7
MCF2L-229ENST00000488765 TRMT1Q9NXH9 659 aaKnown RBP19.44■□□□□ 0.7
MCF2L-229ENST00000488765 PALD1Q9ULE6 856 aa19.44■□□□□ 0.7
MCF2L-229ENST00000488765 TRIM35Q9UPQ4 493 aa19.44■□□□□ 0.7
MCF2L-229ENST00000488765 TMPOP42166 694 aaKnown RBP19.44■□□□□ 0.7
MCF2L-229ENST00000488765 LUZP1Q86V48 1076 aa19.44■□□□□ 0.7
MCF2L-229ENST00000488765 NEK11Q8NG66 645 aa19.43■□□□□ 0.7
MCF2L-229ENST00000488765 ZNF215Q9UL58 517 aaPredicted RBP19.43■□□□□ 0.7
MCF2L-229ENST00000488765 NSD3Q9BZ95 1437 aa19.43■□□□□ 0.7
MCF2L-229ENST00000488765 GYS2P54840 703 aa19.43■□□□□ 0.7
MCF2L-229ENST00000488765 ELF2Q15723 593 aa19.43■□□□□ 0.7
MCF2L-229ENST00000488765 TTC22Q5TAA0 569 aa19.42■□□□□ 0.7
MCF2L-229ENST00000488765 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
MCF2L-229ENST00000488765 TRPM2O94759 1503 aa19.42■□□□□ 0.7
MCF2L-229ENST00000488765 CCDC183Q5T5S1 534 aa19.41■□□□□ 0.7
MCF2L-229ENST00000488765 CKAP2LQ8IYA6 745 aa19.41■□□□□ 0.7
MCF2L-229ENST00000488765 POGZQ7Z3K3 1410 aa19.41■□□□□ 0.7
MCF2L-229ENST00000488765 ARID5BQ14865 1188 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 FBXO38Q6PIJ6 1188 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 TOMM22Q9NS69 142 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 RSPH14Q9UHP6 348 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 MORC2Q9Y6X9 1032 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-229ENST00000488765 SRCIN1Q9C0H9 1055 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 CALCOCO1Q9P1Z2 691 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 EVC2Q86UK5 1308 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 C10orf67Q8IYJ2 551 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 FAM184AQ8NB25 1140 aa19.4■□□□□ 0.7
MCF2L-229ENST00000488765 RBM6P78332 1123 aaKnown RBP19.39■□□□□ 0.69
MCF2L-229ENST00000488765 RGS22Q8NE09 1264 aa19.39■□□□□ 0.69
MCF2L-229ENST00000488765 ANO2Q9NQ90 1003 aa19.39■□□□□ 0.69
MCF2L-229ENST00000488765 USP27XA6NNY8 438 aa19.39■□□□□ 0.69
MCF2L-229ENST00000488765 TRIM66O15016 1216 aa19.39■□□□□ 0.69
MCF2L-229ENST00000488765 MX1P20591 662 aa19.39■□□□□ 0.69
MCF2L-229ENST00000488765 FEZ2Q9UHY8 353 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-229ENST00000488765 POLR3AO14802 1390 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-229ENST00000488765 CASC1Q6TDU7 716 aa19.38■□□□□ 0.69
MCF2L-229ENST00000488765 CABP1Q9NZU7 370 aa19.38■□□□□ 0.69
MCF2L-229ENST00000488765 NCKAP5LQ9HCH0 1330 aa19.38■□□□□ 0.69
MCF2L-229ENST00000488765 RAD51AP2Q09MP3 1159 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms