RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 NBPF6Q5VWK0 638 aa25.94■■□□□ 1.74
ATP1A1-208ENST00000488733 NBPF4Q96M43 638 aa25.94■■□□□ 1.74
ATP1A1-208ENST00000488733 COL22A1Q8NFW1 1626 aaPredicted RBP25.93■■□□□ 1.74
ATP1A1-208ENST00000488733 HTATSF1O43719 755 aaKnown RBP25.93■■□□□ 1.74
ATP1A1-208ENST00000488733 MTHFSDQ2M296 383 aaKnown RBP25.93■■□□□ 1.74
ATP1A1-208ENST00000488733 FAM83GA6ND36 823 aa25.92■■□□□ 1.74
ATP1A1-208ENST00000488733 ALDH1L2Q3SY69 923 aa25.92■■□□□ 1.74
ATP1A1-208ENST00000488733 FRAT1Q92837 279 aaPredicted RBP25.92■■□□□ 1.74
ATP1A1-208ENST00000488733 MS4A1P11836 297 aa25.91■■□□□ 1.74
ATP1A1-208ENST00000488733 USHBP1Q8N6Y0 703 aa25.91■■□□□ 1.74
ATP1A1-208ENST00000488733 RGPD5Q99666 1765 aa25.91■■□□□ 1.74
ATP1A1-208ENST00000488733 RTF1Q92541 710 aaKnown RBP25.91■■□□□ 1.74
ATP1A1-208ENST00000488733 MBIPQ9NS73 344 aa25.91■■□□□ 1.74
ATP1A1-208ENST00000488733 SMC4Q9NTJ3 1288 aa25.9■■□□□ 1.74
ATP1A1-208ENST00000488733 DCTN1Q14203 1278 aa25.89■■□□□ 1.74
ATP1A1-208ENST00000488733 AAMPQ13685 434 aa25.88■■□□□ 1.73
ATP1A1-208ENST00000488733 NCAPD2Q15021 1401 aa25.88■■□□□ 1.73
ATP1A1-208ENST00000488733 ZKSCAN2Q63HK3 967 aa25.88■■□□□ 1.73
ATP1A1-208ENST00000488733 SSH1Q8WYL5 1049 aa25.88■■□□□ 1.73
ATP1A1-208ENST00000488733 BCL2L13Q9BXK5 485 aa25.88■■□□□ 1.73
ATP1A1-208ENST00000488733 CAMTA1Q9Y6Y1 1673 aa25.88■■□□□ 1.73
ATP1A1-208ENST00000488733 RGPD2P0DJD1 1756 aa25.87■■□□□ 1.73
ATP1A1-208ENST00000488733 LMO7Q8WWI1 1683 aa25.86■■□□□ 1.73
ATP1A1-208ENST00000488733 BRPF1P55201 1214 aaPredicted RBP25.86■■□□□ 1.73
ATP1A1-208ENST00000488733 CHL1O00533 1208 aa25.85■■□□□ 1.73
ATP1A1-208ENST00000488733 CSB-PGBD3P0DP91 1061 aa25.85■■□□□ 1.73
ATP1A1-208ENST00000488733 MCM10Q7L590 875 aa25.85■■□□□ 1.73
ATP1A1-208ENST00000488733 KIF16BQ96L93 1317 aa25.85■■□□□ 1.73
ATP1A1-208ENST00000488733 GNAT3A8MTJ3 354 aa25.85■■□□□ 1.73
ATP1A1-208ENST00000488733 VAMP4O75379 141 aa25.85■■□□□ 1.73
ATP1A1-208ENST00000488733 IPO8O15397 1037 aaKnown RBP25.84■■□□□ 1.73
ATP1A1-208ENST00000488733 CRB1P82279 1406 aa25.84■■□□□ 1.73
ATP1A1-208ENST00000488733 PANK1Q8TE04 598 aa25.83■■□□□ 1.73
ATP1A1-208ENST00000488733 NLRP2Q9NX02 1062 aa25.83■■□□□ 1.73
ATP1A1-208ENST00000488733 FAM208AQ9UK61 1670 aaKnown RBP25.82■■□□□ 1.72
ATP1A1-208ENST00000488733 TSHZ2Q9NRE2 1034 aa25.82■■□□□ 1.72
ATP1A1-208ENST00000488733 COL5A2P05997 1499 aaPredicted RBP25.81■■□□□ 1.72
ATP1A1-208ENST00000488733 TWISTNBQ3B726 338 aaPredicted RBP25.81■■□□□ 1.72
ATP1A1-208ENST00000488733 MAP3K5Q99683 1374 aa25.8■■□□□ 1.72
ATP1A1-208ENST00000488733 DZIP1LQ8IYY4 767 aaKnown RBP25.8■■□□□ 1.72
ATP1A1-208ENST00000488733 COG6Q9Y2V7 657 aa25.8■■□□□ 1.72
ATP1A1-208ENST00000488733 WDR17Q8IZU2 1322 aa25.79■■□□□ 1.72
ATP1A1-208ENST00000488733 ATF7IPQ6VMQ6 1270 aa25.79■■□□□ 1.72
ATP1A1-208ENST00000488733 FTSJ3Q8IY81 847 aaKnown RBP25.78■■□□□ 1.72
ATP1A1-208ENST00000488733 TSPYL6Q8N831 410 aa25.78■■□□□ 1.72
ATP1A1-208ENST00000488733 C8orf58Q8NAV2 365 aa25.78■■□□□ 1.72
ATP1A1-208ENST00000488733 AMOTQ4VCS5 1084 aa25.77■■□□□ 1.72
ATP1A1-208ENST00000488733 NOB1Q9ULX3 412 aaKnown RBP25.77■■□□□ 1.72
ATP1A1-208ENST00000488733 PLEKHO1Q53GL0 409 aaPredicted RBP25.77■■□□□ 1.72
ATP1A1-208ENST00000488733 CENPQQ7L2Z9 268 aaPredicted RBP25.77■■□□□ 1.72
ATP1A1-208ENST00000488733 BABAM1Q9NWV8 329 aa25.77■■□□□ 1.72
ATP1A1-208ENST00000488733 COL14A1Q05707 1796 aaKnown RBP25.77■■□□□ 1.72
ATP1A1-208ENST00000488733 JCADQ9P266 1359 aa25.76■■□□□ 1.71
ATP1A1-208ENST00000488733 RLBP1P12271 317 aa25.76■■□□□ 1.71
ATP1A1-208ENST00000488733 CLUAP1Q96AJ1 413 aa25.76■■□□□ 1.71
ATP1A1-208ENST00000488733 TRIM27P14373 513 aa25.75■■□□□ 1.71
ATP1A1-208ENST00000488733 ARHGAP45Q92619 1136 aa25.75■■□□□ 1.71
ATP1A1-208ENST00000488733 LRRC37A3O60309 1634 aa25.75■■□□□ 1.71
ATP1A1-208ENST00000488733 MVPQ14764 893 aaKnown RBP25.74■■□□□ 1.71
ATP1A1-208ENST00000488733 MRPL50Q8N5N7 158 aaKnown RBP25.74■■□□□ 1.71
ATP1A1-208ENST00000488733 ELL2O00472 640 aaPredicted RBP25.74■■□□□ 1.71
ATP1A1-208ENST00000488733 EVA1CP58658 441 aa25.74■■□□□ 1.71
ATP1A1-208ENST00000488733 TOM1L2Q6ZVM7 507 aa25.74■■□□□ 1.71
ATP1A1-208ENST00000488733 RAPGEF4Q8WZA2 1011 aa25.74■■□□□ 1.71
ATP1A1-208ENST00000488733 STRN4Q9NRL3 753 aa25.74■■□□□ 1.71
ATP1A1-208ENST00000488733 BTG4Q9NY30 223 aa25.74■■□□□ 1.71
ATP1A1-208ENST00000488733 KDM2BQ8NHM5 1336 aa25.73■■□□□ 1.71
ATP1A1-208ENST00000488733 NUTM2BA6NNL0 878 aaPredicted RBP25.73■■□□□ 1.71
ATP1A1-208ENST00000488733 NUTM2EB1AL46 878 aaPredicted RBP25.73■■□□□ 1.71
ATP1A1-208ENST00000488733 ADAMTS2O95450 1211 aa25.73■■□□□ 1.71
ATP1A1-208ENST00000488733 NUTM2AQ8IVF1 878 aaPredicted RBP25.73■■□□□ 1.71
ATP1A1-208ENST00000488733 TSPYL4Q9UJ04 414 aa25.73■■□□□ 1.71
ATP1A1-208ENST00000488733 TNNQ9UQP3 1299 aa25.73■■□□□ 1.71
ATP1A1-208ENST00000488733 IL17REQ8NFR9 667 aa25.71■■□□□ 1.71
ATP1A1-208ENST00000488733 AKAP4Q5JQC9 854 aa25.71■■□□□ 1.71
ATP1A1-208ENST00000488733 MEGF6O75095 1541 aa25.7■■□□□ 1.7
ATP1A1-208ENST00000488733 TAF7Q15545 349 aaPredicted RBP25.7■■□□□ 1.7
ATP1A1-208ENST00000488733 LARP1Q6PKG0 1096 aaKnown RBP25.7■■□□□ 1.7
ATP1A1-208ENST00000488733 CARD10Q9BWT7 1032 aa25.7■■□□□ 1.7
ATP1A1-208ENST00000488733 DDX19BQ9UMR2 479 aa25.7■■□□□ 1.7
ATP1A1-208ENST00000488733 PLEKHG2Q9H7P9 1386 aa25.69■■□□□ 1.7
ATP1A1-208ENST00000488733 TATP17735 454 aaPredicted RBP25.69■■□□□ 1.7
ATP1A1-208ENST00000488733 ZNF530Q6P9A1 599 aaPredicted RBP25.68■■□□□ 1.7
ATP1A1-208ENST00000488733 CEMIPQ8WUJ3 1361 aa25.68■■□□□ 1.7
ATP1A1-208ENST00000488733 HSPA1LP34931 641 aa25.68■■□□□ 1.7
ATP1A1-208ENST00000488733 SOS1Q07889 1333 aaPredicted RBP25.68■■□□□ 1.7
ATP1A1-208ENST00000488733 C1orf141Q5JVX7 400 aa25.66■■□□□ 1.7
ATP1A1-208ENST00000488733 MIS18AQ9NYP9 233 aa25.66■■□□□ 1.7
ATP1A1-208ENST00000488733 PLCH1Q4KWH8 1693 aa25.65■■□□□ 1.7
ATP1A1-208ENST00000488733 API5Q9BZZ5 524 aaKnown RBP25.65■■□□□ 1.7
ATP1A1-208ENST00000488733 CHMP4BQ9H444 224 aaKnown RBP25.65■■□□□ 1.7
ATP1A1-208ENST00000488733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.65■■□□□ 1.78e-20■□□□□ 8.4
ATP1A1-208ENST00000488733 TCERG1O14776 1098 aaKnown RBP25.64■■□□□ 1.7
ATP1A1-208ENST00000488733 ITPRIPQ8IWB1 547 aa25.64■■□□□ 1.7
ATP1A1-208ENST00000488733 SPATA31A6Q5VVP1 1343 aa25.64■■□□□ 1.7
ATP1A1-208ENST00000488733 OVOS2A0A0G2JMS6 1433 aa25.64■■□□□ 1.7
ATP1A1-208ENST00000488733 SPG7Q9UQ90 795 aa25.63■■□□□ 1.69
ATP1A1-208ENST00000488733 KRT24Q2M2I5 525 aa25.63■■□□□ 1.69
ATP1A1-208ENST00000488733 TMEM57Q8N5G2 664 aa25.63■■□□□ 1.69
ATP1A1-208ENST00000488733 PARP4Q9UKK3 1724 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms