RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 NSD2O96028 1365 aa15.63■□□□□ 0.09
RAB11FIP3-210ENST00000487899 AMPHP49418 695 aa15.63■□□□□ 0.09
RAB11FIP3-210ENST00000487899 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
RAB11FIP3-210ENST00000487899 ACSBG1Q96GR2 724 aa15.61■□□□□ 0.09
RAB11FIP3-210ENST00000487899 VIRMAQ69YN4 1812 aaKnown RBP15.6■□□□□ 0.09
RAB11FIP3-210ENST00000487899 HSPA5P11021 654 aaKnown RBP15.6■□□□□ 0.09
RAB11FIP3-210ENST00000487899 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
RAB11FIP3-210ENST00000487899 TXNRD1Q16881 649 aa15.59■□□□□ 0.09
RAB11FIP3-210ENST00000487899 HSP90AB2PQ58FF8 381 aa15.59■□□□□ 0.09
RAB11FIP3-210ENST00000487899 NBPF6Q5VWK0 638 aa15.59■□□□□ 0.09
RAB11FIP3-210ENST00000487899 USHBP1Q8N6Y0 703 aa15.59■□□□□ 0.09
RAB11FIP3-210ENST00000487899 NBPF4Q96M43 638 aa15.59■□□□□ 0.09
RAB11FIP3-210ENST00000487899 EMILIN1Q9Y6C2 1016 aa15.59■□□□□ 0.09
RAB11FIP3-210ENST00000487899 EIF4G2P78344 907 aaKnown RBP eCLIP15.58■□□□□ 0.08
RAB11FIP3-210ENST00000487899 PDGFDQ9GZP0 370 aaPredicted RBP15.58■□□□□ 0.08
RAB11FIP3-210ENST00000487899 CGNL1Q0VF96 1302 aa15.58■□□□□ 0.08
RAB11FIP3-210ENST00000487899 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
RAB11FIP3-210ENST00000487899 UTRNP46939 3433 aa15.54■□□□□ 0.08
RAB11FIP3-210ENST00000487899 DDX54Q8TDD1 881 aaKnown RBP15.54■□□□□ 0.08
RAB11FIP3-210ENST00000487899 ZCRB1Q8TBF4 217 aaKnown RBP15.53■□□□□ 0.08
RAB11FIP3-210ENST00000487899 POLR3GLQ9BT43 218 aa15.53■□□□□ 0.08
RAB11FIP3-210ENST00000487899 LRRC4BQ9NT99 713 aa15.53■□□□□ 0.08
RAB11FIP3-210ENST00000487899 GOLGB1Q14789 3259 aaKnown RBP15.53■□□□□ 0.08
RAB11FIP3-210ENST00000487899 C4BP0C0L5 1744 aa15.52■□□□□ 0.08
RAB11FIP3-210ENST00000487899 WASHC2AQ641Q2 1341 aa15.52■□□□□ 0.08
RAB11FIP3-210ENST00000487899 PCDH11XQ9BZA7 1347 aa15.52■□□□□ 0.08
RAB11FIP3-210ENST00000487899 PCDH11YQ9BZA8 1340 aa15.52■□□□□ 0.08
RAB11FIP3-210ENST00000487899 SLC15A2Q16348 729 aa15.52■□□□□ 0.08
RAB11FIP3-210ENST00000487899 ZNF827Q17R98 1081 aa15.52■□□□□ 0.08
RAB11FIP3-210ENST00000487899 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
RAB11FIP3-210ENST00000487899 SPON1Q9HCB6 807 aa15.51■□□□□ 0.07
RAB11FIP3-210ENST00000487899 STK32BQ9NY57 414 aa15.51■□□□□ 0.07
RAB11FIP3-210ENST00000487899 COL5A3P25940 1745 aaPredicted RBP15.51■□□□□ 0.07
RAB11FIP3-210ENST00000487899 POLKQ9UBT6 870 aa15.5■□□□□ 0.07
RAB11FIP3-210ENST00000487899 ZNF831Q5JPB2 1677 aa15.5■□□□□ 0.07
RAB11FIP3-210ENST00000487899 SCN11AQ9UI33 1791 aa15.49■□□□□ 0.07
RAB11FIP3-210ENST00000487899 TATP17735 454 aaPredicted RBP15.49■□□□□ 0.07
RAB11FIP3-210ENST00000487899 PTGER2P43116 358 aa15.49■□□□□ 0.07
RAB11FIP3-210ENST00000487899 PRIM1P49642 420 aaKnown RBP15.49■□□□□ 0.07
RAB11FIP3-210ENST00000487899 PANK3Q9H999 370 aa15.49■□□□□ 0.07
RAB11FIP3-210ENST00000487899 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
RAB11FIP3-210ENST00000487899 KIF7Q2M1P5 1343 aa15.48■□□□□ 0.07
RAB11FIP3-210ENST00000487899 CYP27B1O15528 508 aa15.48■□□□□ 0.07
RAB11FIP3-210ENST00000487899 ZBTB7AO95365 584 aa15.48■□□□□ 0.07
RAB11FIP3-210ENST00000487899 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
RAB11FIP3-210ENST00000487899 CICQ96RK0 1608 aaPredicted RBP15.47■□□□□ 0.07
RAB11FIP3-210ENST00000487899 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
RAB11FIP3-210ENST00000487899 AKT1S1Q96B36 256 aa15.47■□□□□ 0.07
RAB11FIP3-210ENST00000487899 SGIP1Q9BQI5 828 aa15.47■□□□□ 0.07
RAB11FIP3-210ENST00000487899 CHD4Q14839 1912 aa15.47■□□□□ 0.07
RAB11FIP3-210ENST00000487899 TNNT2P45379 298 aaPredicted RBP15.46■□□□□ 0.07
RAB11FIP3-210ENST00000487899 KCNQ4P56696 695 aa15.46■□□□□ 0.07
RAB11FIP3-210ENST00000487899 EIF4A2Q14240 407 aaKnown RBP15.46■□□□□ 0.07
RAB11FIP3-210ENST00000487899 SLC27A3Q5K4L6 730 aa15.46■□□□□ 0.07
RAB11FIP3-210ENST00000487899 EYA1Q99502 592 aa15.46■□□□□ 0.07
RAB11FIP3-210ENST00000487899 IGSF1Q8N6C5 1336 aa15.45■□□□□ 0.06
RAB11FIP3-210ENST00000487899 PNPLA7Q6ZV29 1317 aa15.44■□□□□ 0.06
RAB11FIP3-210ENST00000487899 C4AP0C0L4 1744 aa15.44■□□□□ 0.06
RAB11FIP3-210ENST00000487899 MTFR1LQ9H019 292 aa15.44■□□□□ 0.06
RAB11FIP3-210ENST00000487899 PPP1R1BQ9UD71 204 aaPredicted RBP15.44■□□□□ 0.06
RAB11FIP3-210ENST00000487899 PALLDQ8WX93 1383 aa15.44■□□□□ 0.06
RAB11FIP3-210ENST00000487899 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
RAB11FIP3-210ENST00000487899 TJP1Q07157 1748 aa15.43■□□□□ 0.06
RAB11FIP3-210ENST00000487899 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
RAB11FIP3-210ENST00000487899 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
RAB11FIP3-210ENST00000487899 KDM6AO15550 1401 aaPredicted RBP15.42■□□□□ 0.06
RAB11FIP3-210ENST00000487899 COL3A1P02461 1466 aaPredicted RBP15.41■□□□□ 0.06
RAB11FIP3-210ENST00000487899 KDRP35968 1356 aa15.41■□□□□ 0.06
RAB11FIP3-210ENST00000487899 MAP3K5Q99683 1374 aa15.41■□□□□ 0.06
RAB11FIP3-210ENST00000487899 NKX1-1Q15270 411 aaPredicted RBP15.41■□□□□ 0.06
RAB11FIP3-210ENST00000487899 CCNL1Q9UK58 526 aaPredicted RBP15.41■□□□□ 0.06
RAB11FIP3-210ENST00000487899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.061e-7■■□□□ 12.1
RAB11FIP3-210ENST00000487899 MYH14Q7Z406 1995 aaKnown RBP15.39■□□□□ 0.05
RAB11FIP3-210ENST00000487899 SIPA1L3O60292 1781 aaPredicted RBP15.39■□□□□ 0.05
RAB11FIP3-210ENST00000487899 UBR2Q8IWV8 1755 aa15.39■□□□□ 0.05
RAB11FIP3-210ENST00000487899 PHKG2P15735 406 aa15.38■□□□□ 0.05
RAB11FIP3-210ENST00000487899 MPRIPQ6WCQ1 1025 aa15.38■□□□□ 0.05
RAB11FIP3-210ENST00000487899 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
RAB11FIP3-210ENST00000487899 MRC1P22897 1456 aa15.38■□□□□ 0.05
RAB11FIP3-210ENST00000487899 YY1P25490 414 aa15.37■□□□□ 0.05
RAB11FIP3-210ENST00000487899 MORC1Q86VD1 984 aa15.37■□□□□ 0.05
RAB11FIP3-210ENST00000487899 FHDC1Q9C0D6 1143 aaPredicted RBP15.37■□□□□ 0.05
RAB11FIP3-210ENST00000487899 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
RAB11FIP3-210ENST00000487899 KIAA1551Q9HCM1 1747 aa15.37■□□□□ 0.05
RAB11FIP3-210ENST00000487899 KIF13BQ9NQT8 1826 aa15.36■□□□□ 0.05
RAB11FIP3-210ENST00000487899 PER1O15534 1290 aaPredicted RBP15.36■□□□□ 0.05
RAB11FIP3-210ENST00000487899 AEBP1Q8IUX7 1158 aa15.36■□□□□ 0.05
RAB11FIP3-210ENST00000487899 PIGBQ92521 554 aa15.36■□□□□ 0.05
RAB11FIP3-210ENST00000487899 TFCP2L1Q9NZI6 479 aa15.36■□□□□ 0.05
RAB11FIP3-210ENST00000487899 AMIGO3Q86WK7 504 aa15.34■□□□□ 0.05
RAB11FIP3-210ENST00000487899 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
RAB11FIP3-210ENST00000487899 SLC16A10Q8TF71 515 aa15.34■□□□□ 0.05
RAB11FIP3-210ENST00000487899 NPC1L1Q9UHC9 1359 aa15.34■□□□□ 0.05
RAB11FIP3-210ENST00000487899 IL13P35225 146 aa15.33■□□□□ 0.04
RAB11FIP3-210ENST00000487899 ARXQ96QS3 562 aa15.33■□□□□ 0.04
RAB11FIP3-210ENST00000487899 SYT17Q9BSW7 474 aa15.33■□□□□ 0.04
RAB11FIP3-210ENST00000487899 COL23A1Q86Y22 540 aaPredicted RBP15.32■□□□□ 0.04
RAB11FIP3-210ENST00000487899 SMARCC1Q92922 1105 aaPredicted RBP15.32■□□□□ 0.04
RAB11FIP3-210ENST00000487899 TMOD3Q9NYL9 352 aa15.32■□□□□ 0.04
RAB11FIP3-210ENST00000487899 ASAP1Q9ULH1 1129 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms