RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
RBM39-234ENST00000487604 NANOS1Q8WY41 292 aaKnown RBP8.58□□□□□ -1.04
RBM39-234ENST00000487604 CEP126Q9P2H0 1117 aa8.58□□□□□ -1.04
RBM39-234ENST00000487604 PCDHB11Q9Y5F2 797 aa8.58□□□□□ -1.04
RBM39-234ENST00000487604 ITGA6P23229 1130 aa8.56□□□□□ -1.04
RBM39-234ENST00000487604 LYSMD3Q7Z3D4 306 aa8.56□□□□□ -1.04
RBM39-234ENST00000487604 PRM3Q9NNZ6 103 aa8.56□□□□□ -1.04
RBM39-234ENST00000487604 MEN1O00255 615 aa8.55□□□□□ -1.04
RBM39-234ENST00000487604 TRAK2O60296 914 aa8.55□□□□□ -1.04
RBM39-234ENST00000487604 KRT76Q01546 638 aa8.55□□□□□ -1.04
RBM39-234ENST00000487604 PRICKLE2Q7Z3G6 844 aa8.55□□□□□ -1.04
RBM39-234ENST00000487604 VWA5B2Q8N398 1253 aa8.55□□□□□ -1.04
RBM39-234ENST00000487604 CCDC85AQ96PX6 553 aaPredicted RBP8.55□□□□□ -1.04
RBM39-234ENST00000487604 OSBPL3Q9H4L5 887 aa8.55□□□□□ -1.04
RBM39-234ENST00000487604 GDPD2Q9HCC8 539 aa8.55□□□□□ -1.04
RBM39-234ENST00000487604 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
RBM39-234ENST00000487604 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
RBM39-234ENST00000487604 GPC1P35052 558 aa8.53□□□□□ -1.04
RBM39-234ENST00000487604 EIF4G2P78344 907 aaKnown RBP eCLIP8.53□□□□□ -1.04
RBM39-234ENST00000487604 TSGA10IPQ3SY00 556 aa8.53□□□□□ -1.04
RBM39-234ENST00000487604 PHTF2Q8N3S3 785 aa8.53□□□□□ -1.04
RBM39-234ENST00000487604 FAM181BA6NEQ2 426 aa8.52□□□□□ -1.05
RBM39-234ENST00000487604 RHOQP17081 205 aa8.52□□□□□ -1.05
RBM39-234ENST00000487604 ABL2P42684 1182 aa8.52□□□□□ -1.05
RBM39-234ENST00000487604 VAC14Q08AM6 782 aa8.52□□□□□ -1.05
RBM39-234ENST00000487604 CLN3Q13286 438 aa8.52□□□□□ -1.05
RBM39-234ENST00000487604 MCM6Q14566 821 aa8.52□□□□□ -1.05
RBM39-234ENST00000487604 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
RBM39-234ENST00000487604 ESF1Q9H501 851 aaKnown RBP8.52□□□□□ -1.05
RBM39-234ENST00000487604 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
RBM39-234ENST00000487604 SV2AQ7L0J3 742 aa8.51□□□□□ -1.05
RBM39-234ENST00000487604 CNTNAP3BQ96NU0 1288 aa8.51□□□□□ -1.05
RBM39-234ENST00000487604 NLRP3Q96P20 1036 aa8.51□□□□□ -1.05
RBM39-234ENST00000487604 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
RBM39-234ENST00000487604 GRIP2Q9C0E4 1043 aa8.51□□□□□ -1.05
RBM39-234ENST00000487604 CUEDC1Q9NWM3 386 aaPredicted RBP8.51□□□□□ -1.05
RBM39-234ENST00000487604 CDC14CA4D256 554 aa8.5□□□□□ -1.05
RBM39-234ENST00000487604 POU4F2Q12837 409 aa8.5□□□□□ -1.05
RBM39-234ENST00000487604 ARHGEF10LQ9HCE6 1279 aa8.5□□□□□ -1.05
RBM39-234ENST00000487604 GNRH1P01148 92 aa8.49□□□□□ -1.05
RBM39-234ENST00000487604 SLC27A3Q5K4L6 730 aa8.49□□□□□ -1.05
RBM39-234ENST00000487604 MYCP01106 439 aaPredicted RBP8.48□□□□□ -1.05
RBM39-234ENST00000487604 RAB6BQ9NRW1 208 aa8.48□□□□□ -1.05
RBM39-234ENST00000487604 CHIC2Q9UKJ5 165 aa8.48□□□□□ -1.05
RBM39-234ENST00000487604 IL2RAP01589 272 aa8.47□□□□□ -1.05
RBM39-234ENST00000487604 WASHC4Q2M389 1173 aa8.47□□□□□ -1.05
RBM39-234ENST00000487604 SLFNL1Q499Z3 407 aa8.47□□□□□ -1.05
RBM39-234ENST00000487604 RNF135Q8IUD6 432 aa8.47□□□□□ -1.05
RBM39-234ENST00000487604 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
RBM39-234ENST00000487604 DOLKQ9UPQ8 538 aa8.47□□□□□ -1.05
RBM39-234ENST00000487604 COG6Q9Y2V7 657 aa8.47□□□□□ -1.05
RBM39-234ENST00000487604 SPATA31C2B4DYI2 1134 aa8.46□□□□□ -1.06
RBM39-234ENST00000487604 CENPCQ03188 943 aa8.46□□□□□ -1.06
RBM39-234ENST00000487604 USP4Q13107 963 aa8.46□□□□□ -1.06
RBM39-234ENST00000487604 NBPF10Q6P3W6 841 aaKnown RBP8.46□□□□□ -1.06
RBM39-234ENST00000487604 NBPF15Q8N660 670 aa8.46□□□□□ -1.06
RBM39-234ENST00000487604 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
RBM39-234ENST00000487604 XAGE2Q96GT9 111 aa8.46□□□□□ -1.06
RBM39-234ENST00000487604 DYRK1BQ9Y463 629 aa8.46□□□□□ -1.06
RBM39-234ENST00000487604 HRH3Q9Y5N1 445 aa8.46□□□□□ -1.06
RBM39-234ENST00000487604 DBN1Q16643 649 aa8.44□□□□□ -1.06
RBM39-234ENST00000487604 WDR44Q5JSH3 913 aa8.44□□□□□ -1.06
RBM39-234ENST00000487604 TRIM22Q8IYM9 498 aa8.44□□□□□ -1.06
RBM39-234ENST00000487604 STAU1O95793 577 aaKnown RBP8.43□□□□□ -1.06
RBM39-234ENST00000487604 SLURP2P0DP57 97 aa8.43□□□□□ -1.06
RBM39-234ENST00000487604 SEMA3FQ13275 785 aa8.43□□□□□ -1.06
RBM39-234ENST00000487604 GAS6Q14393 721 aa8.43□□□□□ -1.06
RBM39-234ENST00000487604 RIPOR1Q6ZS17 1223 aa8.43□□□□□ -1.06
RBM39-234ENST00000487604 ZNF837Q96EG3 531 aaPredicted RBP8.43□□□□□ -1.06
RBM39-234ENST00000487604 WASLO00401 505 aaPredicted RBP8.42□□□□□ -1.06
RBM39-234ENST00000487604 OXLD1Q5BKU9 147 aa8.42□□□□□ -1.06
RBM39-234ENST00000487604 TAS1R3Q7RTX0 852 aa8.42□□□□□ -1.06
RBM39-234ENST00000487604 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
RBM39-234ENST00000487604 POM121Q96HA1 1249 aa8.42□□□□□ -1.06
RBM39-234ENST00000487604 GMCL1Q96IK5 515 aa8.42□□□□□ -1.06
RBM39-234ENST00000487604 GAS2L1Q99501 681 aaPredicted RBP8.42□□□□□ -1.06
RBM39-234ENST00000487604 FHDC1Q9C0D6 1143 aaPredicted RBP8.42□□□□□ -1.06
RBM39-234ENST00000487604 TIMMDC1Q9NPL8 285 aa8.42□□□□□ -1.06
RBM39-234ENST00000487604 SOX11P35716 441 aa8.41□□□□□ -1.06
RBM39-234ENST00000487604 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
RBM39-234ENST00000487604 ETNK1Q9HBU6 452 aa8.41□□□□□ -1.06
RBM39-234ENST00000487604 MAP7D1Q3KQU3 841 aa8.4□□□□□ -1.06
RBM39-234ENST00000487604 ESCO1Q5FWF5 840 aa8.4□□□□□ -1.06
RBM39-234ENST00000487604 PLPP7Q8NBV4 271 aa8.4□□□□□ -1.06
RBM39-234ENST00000487604 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.06
RBM39-234ENST00000487604 GPR25O00155 361 aa8.39□□□□□ -1.07
RBM39-234ENST00000487604 PIK3CDO00329 1044 aa8.39□□□□□ -1.07
RBM39-234ENST00000487604 ADAMTS2O95450 1211 aa8.39□□□□□ -1.07
RBM39-234ENST00000487604 F11P03951 625 aa8.39□□□□□ -1.07
RBM39-234ENST00000487604 PHKA2P46019 1235 aa8.39□□□□□ -1.07
RBM39-234ENST00000487604 GTPBP3Q969Y2 492 aaKnown RBP8.39□□□□□ -1.07
RBM39-234ENST00000487604 SIRT1Q96EB6 747 aa8.39□□□□□ -1.07
RBM39-234ENST00000487604 ALG2Q9H553 416 aa8.39□□□□□ -1.07
RBM39-234ENST00000487604 H7C1W4 665 aa8.38□□□□□ -1.07
RBM39-234ENST00000487604 SCNN1DP51172 638 aa8.38□□□□□ -1.07
RBM39-234ENST00000487604 SRSF11Q05519 484 aaKnown RBP8.38□□□□□ -1.07
RBM39-234ENST00000487604 FOXR1Q6PIV2 292 aa8.38□□□□□ -1.07
RBM39-234ENST00000487604 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
RBM39-234ENST00000487604 TMEM214Q6NUQ4 689 aaKnown RBP8.37□□□□□ -1.07
RBM39-234ENST00000487604 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms