RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 USP25Q9UHP3 1055 aa15.13■□□□□ 0.01
HSPG2-211ENST00000486901 ABCC4O15439 1325 aa15.12■□□□□ 0.01
HSPG2-211ENST00000486901 CPA1P15085 419 aa15.12■□□□□ 0.01
HSPG2-211ENST00000486901 KIF1BO60333 1816 aa15.12■□□□□ 0.01
HSPG2-211ENST00000486901 MSH6P52701 1360 aa15.12■□□□□ 0.01
HSPG2-211ENST00000486901 CFAP44Q96MT7 982 aa15.11■□□□□ 0.01
HSPG2-211ENST00000486901 ZNF445P59923 1031 aa15.11■□□□□ 0.01
HSPG2-211ENST00000486901 IFT57Q9NWB7 429 aa15.11■□□□□ 0.01
HSPG2-211ENST00000486901 UNC5CLQ8IV45 518 aa15.11■□□□□ 0.01
HSPG2-211ENST00000486901 PPRC1Q5VV67 1664 aaKnown RBP15.1■□□□□ 0.01
HSPG2-211ENST00000486901 ERC2O15083 957 aa15.1■□□□□ 0.01
HSPG2-211ENST00000486901 IL13P35225 146 aa15.1■□□□□ 0.01
HSPG2-211ENST00000486901 NOL7Q9UMY1 257 aaKnown RBP15.1■□□□□ 0.01
HSPG2-211ENST00000486901 ADGRB1O14514 1584 aa15.1■□□□□ 0.01
HSPG2-211ENST00000486901 NUTM1Q86Y26 1132 aa15.1■□□□□ 0.01
HSPG2-211ENST00000486901 IGSF3O75054 1194 aa15.09■□□□□ 0.01
HSPG2-211ENST00000486901 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
HSPG2-211ENST00000486901 ANKRD44Q8N8A2 993 aa15.09■□□□□ 0.01
HSPG2-211ENST00000486901 IL25Q9H293 177 aa15.09■□□□□ 0.01
HSPG2-211ENST00000486901 ZKSCAN5Q9Y2L8 839 aa15.09■□□□□ 0.01
HSPG2-211ENST00000486901 LRSAM1Q6UWE0 723 aa15.09■□□□□ 0.01
HSPG2-211ENST00000486901 NSD2O96028 1365 aa15.09■□□□□ 0.01
HSPG2-211ENST00000486901 CYP2E1P05181 493 aaPredicted RBP15.09■□□□□ 0.01
HSPG2-211ENST00000486901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.09■□□□□ 0.013e-7■□□□□ 10.3
HSPG2-211ENST00000486901 REC8O95072 547 aa15.08■□□□□ 0.01
HSPG2-211ENST00000486901 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0.01
HSPG2-211ENST00000486901 PTMSP20962 102 aa15.08■□□□□ 0.01
HSPG2-211ENST00000486901 HSP90AB2PQ58FF8 381 aa15.08■□□□□ 0.01
HSPG2-211ENST00000486901 COG3Q96JB2 828 aa15.08■□□□□ 0.01
HSPG2-211ENST00000486901 LRRC7Q96NW7 1537 aa15.08■□□□□ 0
HSPG2-211ENST00000486901 FIBPO43427 364 aa15.08■□□□□ 0
HSPG2-211ENST00000486901 SPC24Q8NBT2 197 aa15.08■□□□□ 0
HSPG2-211ENST00000486901 PDE1AP54750 535 aa15.08■□□□□ 0
HSPG2-211ENST00000486901 FAM69CQ0P6D2 419 aa15.08■□□□□ 0
HSPG2-211ENST00000486901 CHMP4BQ9H444 224 aaKnown RBP15.08■□□□□ 0
HSPG2-211ENST00000486901 HCLS1P14317 486 aaPredicted RBP15.07■□□□□ 0
HSPG2-211ENST00000486901 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
HSPG2-211ENST00000486901 ARHGAP45Q92619 1136 aa15.07■□□□□ 0
HSPG2-211ENST00000486901 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
HSPG2-211ENST00000486901 PNMA6EA0A0J9YXQ4 647 aa15.06■□□□□ 0
HSPG2-211ENST00000486901 NUTM2GQ5VZR2 741 aa15.06■□□□□ 0
HSPG2-211ENST00000486901 USP48Q86UV5 1035 aa15.06■□□□□ 0
HSPG2-211ENST00000486901 LTV1Q96GA3 475 aaPredicted RBP15.06■□□□□ 0
HSPG2-211ENST00000486901 CNPY2Q9Y2B0 182 aa15.06■□□□□ 0
HSPG2-211ENST00000486901 COL3A1P02461 1466 aaPredicted RBP15.06■□□□□ 0
HSPG2-211ENST00000486901 CBX1P83916 185 aa15.05■□□□□ 0
HSPG2-211ENST00000486901 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ 0
HSPG2-211ENST00000486901 TSPY26PQ9H489 355 aa15.05■□□□□ 0
HSPG2-211ENST00000486901 GLI2P10070 1586 aa15.05■□□□□ -0
HSPG2-211ENST00000486901 ZNF853P0CG23 659 aa15.05■□□□□ -0
HSPG2-211ENST00000486901 MROH1Q8NDA8 1641 aa15.05■□□□□ -0
HSPG2-211ENST00000486901 YTHDC2Q9H6S0 1430 aaKnown RBP15.05■□□□□ -0
HSPG2-211ENST00000486901 RPGRIP1LQ68CZ1 1315 aa15.05■□□□□ -0
HSPG2-211ENST00000486901 ADGRB2O60241 1585 aa15.04■□□□□ -0
HSPG2-211ENST00000486901 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
HSPG2-211ENST00000486901 TSPYL4Q9UJ04 414 aa15.04■□□□□ -0
HSPG2-211ENST00000486901 ASXL2Q76L83 1435 aa15.04■□□□□ -0
HSPG2-211ENST00000486901 CFAP74Q9C0B2 1584 aa15.04■□□□□ -0
HSPG2-211ENST00000486901 NRXN1Q9ULB1 1477 aa15.04■□□□□ -0
HSPG2-211ENST00000486901 GIMAP6Q6P9H5 292 aa15.04■□□□□ -0
HSPG2-211ENST00000486901 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
HSPG2-211ENST00000486901 RTL1A6NKG5 1358 aa15.03■□□□□ -0
HSPG2-211ENST00000486901 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
HSPG2-211ENST00000486901 PDLIM2Q96JY6 352 aa15.03■□□□□ -0
HSPG2-211ENST00000486901 ADGRB3O60242 1522 aa15.03■□□□□ -0
HSPG2-211ENST00000486901 FAM135BQ49AJ0 1406 aa15.03■□□□□ -0
HSPG2-211ENST00000486901 SPG7Q9UQ90 795 aa15.03■□□□□ -0
HSPG2-211ENST00000486901 CAMSAP1Q5T5Y3 1602 aa15.02■□□□□ -0
HSPG2-211ENST00000486901 EIF4A2Q14240 407 aaKnown RBP15.02■□□□□ -0
HSPG2-211ENST00000486901 RPAP2Q8IXW5 612 aaPredicted RBP15.02■□□□□ -0
HSPG2-211ENST00000486901 CCDC39Q9UFE4 941 aa15.02■□□□□ -0
HSPG2-211ENST00000486901 CD163L1Q9NR16 1453 aa15.02□□□□□ -0.01
HSPG2-211ENST00000486901 FAM173BQ6P4H8 233 aa15.02□□□□□ -0.01
HSPG2-211ENST00000486901 A0A0U1RQG5 324 aaPredicted RBP15.01□□□□□ -0.01
HSPG2-211ENST00000486901 ESYT1Q9BSJ8 1104 aa15.01□□□□□ -0.01
HSPG2-211ENST00000486901 RIMS2Q9UQ26 1411 aa15.01□□□□□ -0.01
HSPG2-211ENST00000486901 FERMT3Q86UX7 667 aa15.01□□□□□ -0.01
HSPG2-211ENST00000486901 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
HSPG2-211ENST00000486901 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
HSPG2-211ENST00000486901 KIAA1210Q9ULL0 1709 aa15.01□□□□□ -0.01
HSPG2-211ENST00000486901 ADCY5O95622 1261 aa15.01□□□□□ -0.01
HSPG2-211ENST00000486901 ANXA1P04083 346 aa15.01□□□□□ -0.01
HSPG2-211ENST00000486901 CLEC17AQ6ZS10 378 aa15.01□□□□□ -0.01
HSPG2-211ENST00000486901 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
HSPG2-211ENST00000486901 MED14O60244 1454 aa15□□□□□ -0.01
HSPG2-211ENST00000486901 EIF2S2P20042 333 aaKnown RBP15□□□□□ -0.01
HSPG2-211ENST00000486901 MX1P20591 662 aa15□□□□□ -0.01
HSPG2-211ENST00000486901 TCEANC2Q96MN5 208 aa15□□□□□ -0.01
HSPG2-211ENST00000486901 KIAA2012Q0VF49 1180 aa15□□□□□ -0.01
HSPG2-211ENST00000486901 CAMK4Q16566 473 aa15□□□□□ -0.01
HSPG2-211ENST00000486901 PNPLA6Q8IY17 1366 aa15□□□□□ -0.01
HSPG2-211ENST00000486901 ZNF500O60304 480 aaPredicted RBP15□□□□□ -0.01
HSPG2-211ENST00000486901 HMMRO75330 724 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 CWC27Q6UX04 472 aaKnown RBP14.99□□□□□ -0.01
HSPG2-211ENST00000486901 SRCIN1Q9C0H9 1055 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 VWDEQ8N2E2 1590 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 BRD1O95696 1058 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 LMOD3Q0VAK6 560 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 DEPDC5O75140 1603 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 VPS37CA5D8V6 355 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms