RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
C9orf16-202ENST00000486420 RREB1Q92766 1687 aa16.62■□□□□ 0.25
C9orf16-202ENST00000486420 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
C9orf16-202ENST00000486420 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
C9orf16-202ENST00000486420 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
C9orf16-202ENST00000486420 HMGB2P26583 209 aaKnown RBP16.61■□□□□ 0.25
C9orf16-202ENST00000486420 AMOTQ4VCS5 1084 aa16.61■□□□□ 0.25
C9orf16-202ENST00000486420 EYA1Q99502 592 aa16.61■□□□□ 0.25
C9orf16-202ENST00000486420 IL13P35225 146 aa16.6■□□□□ 0.25
C9orf16-202ENST00000486420 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
C9orf16-202ENST00000486420 ZCRB1Q8TBF4 217 aaKnown RBP16.6■□□□□ 0.25
C9orf16-202ENST00000486420 PCDH11XQ9BZA7 1347 aa16.6■□□□□ 0.25
C9orf16-202ENST00000486420 PCDH11YQ9BZA8 1340 aa16.6■□□□□ 0.25
C9orf16-202ENST00000486420 ANP32CO43423 234 aa16.58■□□□□ 0.24
C9orf16-202ENST00000486420 NEFMP07197 916 aa16.58■□□□□ 0.24
C9orf16-202ENST00000486420 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
C9orf16-202ENST00000486420 KDRP35968 1356 aa16.58■□□□□ 0.24
C9orf16-202ENST00000486420 NUP188Q5SRE5 1749 aa16.58■□□□□ 0.24
C9orf16-202ENST00000486420 LRP5O75197 1615 aa16.57■□□□□ 0.24
C9orf16-202ENST00000486420 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
C9orf16-202ENST00000486420 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
C9orf16-202ENST00000486420 PRKRIP1Q9H875 184 aaPredicted RBP16.57■□□□□ 0.24
C9orf16-202ENST00000486420 TRIM37O94972 964 aa16.55■□□□□ 0.24
C9orf16-202ENST00000486420 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
C9orf16-202ENST00000486420 SULT6B1Q6IMI4 303 aa16.54■□□□□ 0.24
C9orf16-202ENST00000486420 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
C9orf16-202ENST00000486420 FCHSD2O94868 740 aa16.53■□□□□ 0.24
C9orf16-202ENST00000486420 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
C9orf16-202ENST00000486420 IFNL2Q8IZJ0 200 aa16.53■□□□□ 0.24
C9orf16-202ENST00000486420 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
C9orf16-202ENST00000486420 MEGF6O75095 1541 aa16.53■□□□□ 0.24
C9orf16-202ENST00000486420 COL3A1P02461 1466 aaPredicted RBP16.53■□□□□ 0.24
C9orf16-202ENST00000486420 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
C9orf16-202ENST00000486420 MARCH10Q8NA82 808 aaPredicted RBP16.52■□□□□ 0.24
C9orf16-202ENST00000486420 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
C9orf16-202ENST00000486420 C1orf141Q5JVX7 400 aa16.51■□□□□ 0.23
C9orf16-202ENST00000486420 DDX54Q8TDD1 881 aaKnown RBP16.51■□□□□ 0.23
C9orf16-202ENST00000486420 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
C9orf16-202ENST00000486420 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
C9orf16-202ENST00000486420 APBA3O96018 575 aa16.5■□□□□ 0.23
C9orf16-202ENST00000486420 U2AF1L5P0DN76 240 aaPredicted RBP16.5■□□□□ 0.23
C9orf16-202ENST00000486420 U2AF1Q01081 240 aaKnown RBP eCLIP16.5■□□□□ 0.23
C9orf16-202ENST00000486420 NKX1-1Q15270 411 aaPredicted RBP16.49■□□□□ 0.23
C9orf16-202ENST00000486420 GAS2L2Q8NHY3 880 aa16.49■□□□□ 0.23
C9orf16-202ENST00000486420 CAMKK2Q96RR4 588 aa16.49■□□□□ 0.23
C9orf16-202ENST00000486420 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.23
C9orf16-202ENST00000486420 EZH2Q15910 746 aaKnown RBP16.48■□□□□ 0.23
C9orf16-202ENST00000486420 DCAF5Q96JK2 942 aa16.48■□□□□ 0.23
C9orf16-202ENST00000486420 PLSCR1O15162 318 aa16.46■□□□□ 0.23
C9orf16-202ENST00000486420 PHKG2P15735 406 aa16.46■□□□□ 0.23
C9orf16-202ENST00000486420 AKAP4Q5JQC9 854 aa16.46■□□□□ 0.23
C9orf16-202ENST00000486420 ZNF530Q6P9A1 599 aaPredicted RBP16.46■□□□□ 0.23
C9orf16-202ENST00000486420 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
C9orf16-202ENST00000486420 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
C9orf16-202ENST00000486420 HMOX1P09601 288 aa16.45■□□□□ 0.22
C9orf16-202ENST00000486420 PSDA5PKW4 1024 aaPredicted RBP16.44■□□□□ 0.22
C9orf16-202ENST00000486420 CYP27B1O15528 508 aa16.44■□□□□ 0.22
C9orf16-202ENST00000486420 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
C9orf16-202ENST00000486420 BTAF1O14981 1849 aa16.44■□□□□ 0.22
C9orf16-202ENST00000486420 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
C9orf16-202ENST00000486420 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
C9orf16-202ENST00000486420 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
C9orf16-202ENST00000486420 DOT1LQ8TEK3 1739 aa16.42■□□□□ 0.22
C9orf16-202ENST00000486420 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
C9orf16-202ENST00000486420 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
C9orf16-202ENST00000486420 R3HDM1Q15032 1099 aaKnown RBP16.41■□□□□ 0.22
C9orf16-202ENST00000486420 KAT6BQ8WYB5 2073 aa16.41■□□□□ 0.22
C9orf16-202ENST00000486420 GNAT3A8MTJ3 354 aa16.4■□□□□ 0.22
C9orf16-202ENST00000486420 NBPF14Q5TI25 921 aa16.4■□□□□ 0.22
C9orf16-202ENST00000486420 RTF1Q92541 710 aaKnown RBP16.4■□□□□ 0.22
C9orf16-202ENST00000486420 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
C9orf16-202ENST00000486420 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
C9orf16-202ENST00000486420 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
C9orf16-202ENST00000486420 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
C9orf16-202ENST00000486420 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
C9orf16-202ENST00000486420 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
C9orf16-202ENST00000486420 CABP4P57796 275 aa16.38■□□□□ 0.21
C9orf16-202ENST00000486420 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
C9orf16-202ENST00000486420 MTHFSDQ2M296 383 aaKnown RBP16.37■□□□□ 0.21
C9orf16-202ENST00000486420 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
C9orf16-202ENST00000486420 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
C9orf16-202ENST00000486420 RUNDC1Q96C34 613 aa16.36■□□□□ 0.21
C9orf16-202ENST00000486420 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
C9orf16-202ENST00000486420 TEFQ10587 303 aa16.35■□□□□ 0.21
C9orf16-202ENST00000486420 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
C9orf16-202ENST00000486420 PTF1AQ7RTS3 328 aa16.35■□□□□ 0.21
C9orf16-202ENST00000486420 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
C9orf16-202ENST00000486420 KCNQ2O43526 872 aa16.34■□□□□ 0.21
C9orf16-202ENST00000486420 NFE2L2Q16236 605 aa16.34■□□□□ 0.21
C9orf16-202ENST00000486420 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
C9orf16-202ENST00000486420 LY75O60449 1722 aa16.33■□□□□ 0.21
C9orf16-202ENST00000486420 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
C9orf16-202ENST00000486420 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
C9orf16-202ENST00000486420 QSER1Q2KHR3 1735 aa16.33■□□□□ 0.2
C9orf16-202ENST00000486420 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
C9orf16-202ENST00000486420 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
C9orf16-202ENST00000486420 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
C9orf16-202ENST00000486420 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
C9orf16-202ENST00000486420 SLC52A2Q9HAB3 445 aa16.32■□□□□ 0.2
C9orf16-202ENST00000486420 MRC1P22897 1456 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms