RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L12C9JPN9 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L21D6R901 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 ATP1A2P50993 1020 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 ERVK-9P63128 1117 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 CLDN10P78369 228 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 DNAAF2Q9NVR5 837 aaKnown RBP11.23□□□□□ -0.61
RTN4-214ENST00000486085 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
RTN4-214ENST00000486085 FAM196BA6NMK8 535 aa11.22□□□□□ -0.61
RTN4-214ENST00000486085 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
RTN4-214ENST00000486085 PSME1Q06323 249 aa11.22□□□□□ -0.61
RTN4-214ENST00000486085 ZNF594Q96JF6 807 aaPredicted RBP11.22□□□□□ -0.61
RTN4-214ENST00000486085 PCDHGA11Q9Y5H2 935 aa11.22□□□□□ -0.61
RTN4-214ENST00000486085 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
RTN4-214ENST00000486085 LILRA1O75019 489 aa11.21□□□□□ -0.61
RTN4-214ENST00000486085 ADD1P35611 737 aaKnown RBP11.21□□□□□ -0.61
RTN4-214ENST00000486085 PTK7Q13308 1070 aa11.21□□□□□ -0.61
RTN4-214ENST00000486085 NOVA2Q9UNW9 492 aaKnown RBP11.21□□□□□ -0.61
RTN4-214ENST00000486085 ZIC2O95409 532 aaPredicted RBP11.2□□□□□ -0.62
RTN4-214ENST00000486085 WDR4P57081 412 aaKnown RBP11.2□□□□□ -0.62
RTN4-214ENST00000486085 HPS1Q92902 700 aa11.2□□□□□ -0.62
RTN4-214ENST00000486085 OSBPL3Q9H4L5 887 aa11.2□□□□□ -0.62
RTN4-214ENST00000486085 KIAA1024Q9UPX6 916 aa11.2□□□□□ -0.62
RTN4-214ENST00000486085 LARGE2Q8N3Y3 721 aa11.19□□□□□ -0.62
RTN4-214ENST00000486085 ITPKCQ96DU7 683 aa11.19□□□□□ -0.62
RTN4-214ENST00000486085 DPYDQ12882 1025 aa11.18□□□□□ -0.62
RTN4-214ENST00000486085 CBLBQ13191 982 aa11.18□□□□□ -0.62
RTN4-214ENST00000486085 ELOAQ14241 798 aaKnown RBP11.18□□□□□ -0.62
RTN4-214ENST00000486085 CCDC102BQ68D86 513 aa11.18□□□□□ -0.62
RTN4-214ENST00000486085 ANKMY2Q8IV38 441 aa11.18□□□□□ -0.62
RTN4-214ENST00000486085 KLF16Q9BXK1 252 aaPredicted RBP11.18□□□□□ -0.62
RTN4-214ENST00000486085 ZFAND3Q9H8U3 227 aa11.18□□□□□ -0.62
RTN4-214ENST00000486085 ZMIZ1Q9ULJ6 1067 aa11.18□□□□□ -0.62
RTN4-214ENST00000486085 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
RTN4-214ENST00000486085 PDIA4P13667 645 aaKnown RBP11.17□□□□□ -0.62
RTN4-214ENST00000486085 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
RTN4-214ENST00000486085 FAM200AQ8TCP9 573 aa11.17□□□□□ -0.62
RTN4-214ENST00000486085 STK32AQ8WU08 396 aa11.17□□□□□ -0.62
RTN4-214ENST00000486085 TIMP2P16035 220 aa11.16□□□□□ -0.62
RTN4-214ENST00000486085 RBM19Q9Y4C8 960 aaKnown RBP11.16□□□□□ -0.62
RTN4-214ENST00000486085 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
RTN4-214ENST00000486085 TMEM164Q5U3C3 297 aa11.15□□□□□ -0.62
RTN4-214ENST00000486085 CYP2U1Q7Z449 544 aa11.15□□□□□ -0.62
RTN4-214ENST00000486085 SIX5Q8N196 739 aa11.15□□□□□ -0.62
RTN4-214ENST00000486085 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
RTN4-214ENST00000486085 SFI1A8K8P3 1242 aa11.14□□□□□ -0.63
RTN4-214ENST00000486085 DKK1O94907 266 aa11.14□□□□□ -0.63
RTN4-214ENST00000486085 SEC13P55735 322 aa11.13□□□□□ -0.63
RTN4-214ENST00000486085 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
RTN4-214ENST00000486085 GFRA3O60609 400 aa11.12□□□□□ -0.63
RTN4-214ENST00000486085 ADH1AP07327 375 aa11.12□□□□□ -0.63
RTN4-214ENST00000486085 PDE4CQ08493 712 aa11.12□□□□□ -0.63
RTN4-214ENST00000486085 Q6ZVU0 165 aa11.12□□□□□ -0.63
RTN4-214ENST00000486085 AGBL1Q96MI9 1066 aa11.12□□□□□ -0.63
RTN4-214ENST00000486085 USTQ9Y2C2 406 aa11.12□□□□□ -0.63
RTN4-214ENST00000486085 TMEM88BA6NKF7 163 aa11.11□□□□□ -0.63
RTN4-214ENST00000486085 GDF10P55107 478 aa11.11□□□□□ -0.63
RTN4-214ENST00000486085 RAB6BQ9NRW1 208 aa11.11□□□□□ -0.63
RTN4-214ENST00000486085 TMEM229AB2RXF0 380 aa11.1□□□□□ -0.63
RTN4-214ENST00000486085 CAPN5O15484 640 aaPredicted RBP11.1□□□□□ -0.63
RTN4-214ENST00000486085 GNRH1P01148 92 aa11.1□□□□□ -0.63
RTN4-214ENST00000486085 SCNN1DP51172 638 aa11.1□□□□□ -0.63
RTN4-214ENST00000486085 TRAIPQ9BWF2 469 aa11.1□□□□□ -0.63
RTN4-214ENST00000486085 ETNK1Q9HBU6 452 aa11.1□□□□□ -0.63
RTN4-214ENST00000486085 RELBQ01201 579 aa11.09□□□□□ -0.63
RTN4-214ENST00000486085 KDF1Q8NAX2 398 aaPredicted RBP11.09□□□□□ -0.63
RTN4-214ENST00000486085 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
RTN4-214ENST00000486085 ZNF358Q9NW07 568 aa11.09□□□□□ -0.63
RTN4-214ENST00000486085 SERTAD1Q9UHV2 236 aa11.09□□□□□ -0.63
RTN4-214ENST00000486085 LGR5O75473 907 aa11.08□□□□□ -0.64
RTN4-214ENST00000486085 PTGIRP43119 386 aa11.08□□□□□ -0.64
RTN4-214ENST00000486085 HINFPQ9BQA5 517 aa11.08□□□□□ -0.64
RTN4-214ENST00000486085 A0A1W2PRU2 124 aa11.07□□□□□ -0.64
RTN4-214ENST00000486085 NRG2O14511 850 aaPredicted RBP11.07□□□□□ -0.64
RTN4-214ENST00000486085 INHAP05111 366 aa11.07□□□□□ -0.64
RTN4-214ENST00000486085 FAM69CQ0P6D2 419 aa11.07□□□□□ -0.64
RTN4-214ENST00000486085 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
RTN4-214ENST00000486085 MEIOBQ8N635 442 aa11.07□□□□□ -0.64
RTN4-214ENST00000486085 ZNF395Q9H8N7 513 aaPredicted RBP11.07□□□□□ -0.64
RTN4-214ENST00000486085 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
RTN4-214ENST00000486085 TSEN2Q8NCE0 465 aaKnown RBP11.06□□□□□ -0.64
RTN4-214ENST00000486085 MEN1O00255 615 aa11.05□□□□□ -0.64
RTN4-214ENST00000486085 BACH1O14867 736 aa11.05□□□□□ -0.64
RTN4-214ENST00000486085 DGAT1O75907 488 aa11.05□□□□□ -0.64
RTN4-214ENST00000486085 IL2RAP01589 272 aa11.05□□□□□ -0.64
RTN4-214ENST00000486085 AVPP01185 164 aa11.04□□□□□ -0.64
RTN4-214ENST00000486085 SWI5Q1ZZU3 235 aa11.04□□□□□ -0.64
RTN4-214ENST00000486085 CNKSR1Q969H4 720 aa11.04□□□□□ -0.64
RTN4-214ENST00000486085 XAGE2Q96GT9 111 aa11.04□□□□□ -0.64
RTN4-214ENST00000486085 M0R2N6 131 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms