RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 SLC27A3Q5K4L6 730 aa25.59■■□□□ 1.69
RHBDF1-209ENST00000486045 NBPF6Q5VWK0 638 aa25.59■■□□□ 1.69
RHBDF1-209ENST00000486045 USHBP1Q8N6Y0 703 aa25.59■■□□□ 1.69
RHBDF1-209ENST00000486045 NBPF4Q96M43 638 aa25.59■■□□□ 1.69
RHBDF1-209ENST00000486045 UTRNP46939 3433 aa25.59■■□□□ 1.69
RHBDF1-209ENST00000486045 RTL1A6NKG5 1358 aa25.58■■□□□ 1.69
RHBDF1-209ENST00000486045 NSD2O96028 1365 aa25.58■■□□□ 1.69
RHBDF1-209ENST00000486045 PNPLA7Q6ZV29 1317 aa25.55■■□□□ 1.68
RHBDF1-209ENST00000486045 RGPD2P0DJD1 1756 aa25.54■■□□□ 1.68
RHBDF1-209ENST00000486045 DOT1LQ8TEK3 1739 aa25.54■■□□□ 1.68
RHBDF1-209ENST00000486045 TFCP2L1Q9NZI6 479 aa25.53■■□□□ 1.68
RHBDF1-209ENST00000486045 SHANK3Q9BYB0 1731 aa25.53■■□□□ 1.68
RHBDF1-209ENST00000486045 KAT6BQ8WYB5 2073 aa25.52■■□□□ 1.68
RHBDF1-209ENST00000486045 HSP90AB2PQ58FF8 381 aa25.52■■□□□ 1.68
RHBDF1-209ENST00000486045 MAP3K5Q99683 1374 aa25.51■■□□□ 1.67
RHBDF1-209ENST00000486045 SMG6Q86US8 1419 aaKnown RBP25.51■■□□□ 1.67
RHBDF1-209ENST00000486045 SLC16A10Q8TF71 515 aa25.5■■□□□ 1.67
RHBDF1-209ENST00000486045 RAPGEF4Q8WZA2 1011 aa25.5■■□□□ 1.67
RHBDF1-209ENST00000486045 CCNL1Q9UK58 526 aaPredicted RBP25.49■■□□□ 1.67
RHBDF1-209ENST00000486045 INSRP06213 1382 aa25.48■■□□□ 1.67
RHBDF1-209ENST00000486045 KLHL34Q8N239 644 aa25.48■■□□□ 1.67
RHBDF1-209ENST00000486045 ZNF784Q8NCA9 323 aaPredicted RBP25.48■■□□□ 1.67
RHBDF1-209ENST00000486045 CARD14Q9BXL6 1004 aa25.48■■□□□ 1.67
RHBDF1-209ENST00000486045 CGNL1Q0VF96 1302 aa25.47■■□□□ 1.67
RHBDF1-209ENST00000486045 TATP17735 454 aaPredicted RBP25.47■■□□□ 1.67
RHBDF1-209ENST00000486045 CDCA8Q53HL2 280 aa25.47■■□□□ 1.67
RHBDF1-209ENST00000486045 FLT4P35916 1363 aa25.46■■□□□ 1.67
RHBDF1-209ENST00000486045 POLD1P28340 1107 aa25.46■■□□□ 1.67
RHBDF1-209ENST00000486045 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
RHBDF1-209ENST00000486045 NSD3Q9BZ95 1437 aa25.45■■□□□ 1.66
RHBDF1-209ENST00000486045 LY75O60449 1722 aa25.44■■□□□ 1.66
RHBDF1-209ENST00000486045 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
RHBDF1-209ENST00000486045 TUBGCP6Q96RT7 1819 aa25.42■■□□□ 1.66
RHBDF1-209ENST00000486045 PCDH11XQ9BZA7 1347 aa25.42■■□□□ 1.66
RHBDF1-209ENST00000486045 PCDH11YQ9BZA8 1340 aa25.42■■□□□ 1.66
RHBDF1-209ENST00000486045 GPR162Q16538 588 aa25.42■■□□□ 1.66
RHBDF1-209ENST00000486045 MSH5O43196 834 aa25.41■■□□□ 1.66
RHBDF1-209ENST00000486045 COL23A1Q86Y22 540 aaPredicted RBP25.41■■□□□ 1.66
RHBDF1-209ENST00000486045 KIF20BQ96Q89 1820 aa25.41■■□□□ 1.66
RHBDF1-209ENST00000486045 KIF24Q5T7B8 1368 aa25.41■■□□□ 1.66
RHBDF1-209ENST00000486045 CYP27B1O15528 508 aa25.4■■□□□ 1.66
RHBDF1-209ENST00000486045 NLGN2Q8NFZ4 835 aa25.4■■□□□ 1.66
RHBDF1-209ENST00000486045 PPM1GO15355 546 aaPredicted RBP25.38■■□□□ 1.65
RHBDF1-209ENST00000486045 MPRIPQ6WCQ1 1025 aa25.38■■□□□ 1.65
RHBDF1-209ENST00000486045 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
RHBDF1-209ENST00000486045 COL24A1Q17RW2 1714 aa25.37■■□□□ 1.65
RHBDF1-209ENST00000486045 PALLDQ8WX93 1383 aa25.37■■□□□ 1.65
RHBDF1-209ENST00000486045 MSL1Q68DK7 614 aa25.37■■□□□ 1.65
RHBDF1-209ENST00000486045 GOLGB1Q14789 3259 aaKnown RBP25.36■■□□□ 1.65
RHBDF1-209ENST00000486045 NCAPD2Q15021 1401 aa25.33■■□□□ 1.65
RHBDF1-209ENST00000486045 TOGARAM1Q9Y4F4 1720 aa25.31■■□□□ 1.64
RHBDF1-209ENST00000486045 WASHC2AQ641Q2 1341 aa25.31■■□□□ 1.64
RHBDF1-209ENST00000486045 PIGBQ92521 554 aa25.3■■□□□ 1.64
RHBDF1-209ENST00000486045 EYA1Q99502 592 aa25.3■■□□□ 1.64
RHBDF1-209ENST00000486045 POLR3GLQ9BT43 218 aa25.3■■□□□ 1.64
RHBDF1-209ENST00000486045 C5P01031 1676 aa25.29■■□□□ 1.64
RHBDF1-209ENST00000486045 AMIGO3Q86WK7 504 aa25.29■■□□□ 1.64
RHBDF1-209ENST00000486045 TIMELESSQ9UNS1 1208 aa25.29■■□□□ 1.64
RHBDF1-209ENST00000486045 YBX3P16989 372 aaKnown RBP eCLIP25.28■■□□□ 1.64
RHBDF1-209ENST00000486045 NKX1-1Q15270 411 aaPredicted RBP25.28■■□□□ 1.64
RHBDF1-209ENST00000486045 SMIM5Q71RC9 77 aa25.28■■□□□ 1.64
RHBDF1-209ENST00000486045 SMARCC1Q92922 1105 aaPredicted RBP25.28■■□□□ 1.64
RHBDF1-209ENST00000486045 POLKQ9UBT6 870 aa25.28■■□□□ 1.64
RHBDF1-209ENST00000486045 PKD1L3Q7Z443 1732 aa25.28■■□□□ 1.64
RHBDF1-209ENST00000486045 SPG7Q9UQ90 795 aa25.27■■□□□ 1.64
RHBDF1-209ENST00000486045 CHD4Q14839 1912 aa25.27■■□□□ 1.64
RHBDF1-209ENST00000486045 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
RHBDF1-209ENST00000486045 ANKRD26Q9UPS8 1709 aa25.26■■□□□ 1.63
RHBDF1-209ENST00000486045 FLAD1Q8NFF5 587 aa25.25■■□□□ 1.63
RHBDF1-209ENST00000486045 AK7Q96M32 723 aa25.25■■□□□ 1.63
RHBDF1-209ENST00000486045 PHF14O94880 888 aa25.23■■□□□ 1.63
RHBDF1-209ENST00000486045 C4BP0C0L5 1744 aa25.23■■□□□ 1.63
RHBDF1-209ENST00000486045 C1QTNF8P60827 252 aa25.22■■□□□ 1.63
RHBDF1-209ENST00000486045 EIF4A2Q14240 407 aaKnown RBP25.22■■□□□ 1.63
RHBDF1-209ENST00000486045 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
RHBDF1-209ENST00000486045 LOC102724428A0A0B4J2F2 783 aa25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 PHKG2P15735 406 aa25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 HMGB2P26583 209 aaKnown RBP25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 SIK1P57059 783 aa25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 LINC00116Q8NCU8 138 aa25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 TMOD3Q9NYL9 352 aa25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 ASAP1Q9ULH1 1129 aa25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 ITGB4P16144 1822 aa25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 TAF1LQ8IZX4 1826 aa25.21■■□□□ 1.63
RHBDF1-209ENST00000486045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.2■■□□□ 1.62
RHBDF1-209ENST00000486045 CLSPNQ9HAW4 1339 aa25.19■■□□□ 1.62
RHBDF1-209ENST00000486045 GRIN3BO60391 1043 aa25.19■■□□□ 1.62
RHBDF1-209ENST00000486045 IFNL2Q8IZJ0 200 aa25.19■■□□□ 1.62
RHBDF1-209ENST00000486045 CD2APQ9Y5K6 639 aa25.19■■□□□ 1.62
RHBDF1-209ENST00000486045 ITPK1Q13572 414 aa25.18■■□□□ 1.62
RHBDF1-209ENST00000486045 SENP3-EIF4A1A0A087X0R7 540 aa25.17■■□□□ 1.62
RHBDF1-209ENST00000486045 HSPA5P11021 654 aaKnown RBP25.16■■□□□ 1.62
RHBDF1-209ENST00000486045 MAP2P11137 1827 aaKnown RBP25.15■■□□□ 1.62
RHBDF1-209ENST00000486045 SSFA2P28290 1259 aa25.15■■□□□ 1.62
RHBDF1-209ENST00000486045 PANK3Q9H999 370 aa25.15■■□□□ 1.62
RHBDF1-209ENST00000486045 ATG3Q9NT62 314 aa25.15■■□□□ 1.62
RHBDF1-209ENST00000486045 GIGYF1O75420 1035 aaPredicted RBP25.14■■□□□ 1.62
RHBDF1-209ENST00000486045 ATP6V1AP38606 617 aa25.14■■□□□ 1.62
RHBDF1-209ENST00000486045 IGSF1Q8N6C5 1336 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms