RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 NKTRP30414 1462 aaKnown RBP10.71□□□□□ -0.69
SMC4-217ENST00000485867 SHPRHQ149N8 1683 aa10.71□□□□□ -0.69
SMC4-217ENST00000485867 CEP162Q5TB80 1403 aa10.71□□□□□ -0.69
SMC4-217ENST00000485867 ZNF598Q86UK7 904 aaKnown RBP10.71□□□□□ -0.69
SMC4-217ENST00000485867 MINK1Q8N4C8 1332 aaPredicted RBP10.71□□□□□ -0.69
SMC4-217ENST00000485867 SRCAPQ6ZRS2 3230 aa10.71□□□□□ -0.7
SMC4-217ENST00000485867 KDM5AP29375 1690 aaKnown RBP10.7□□□□□ -0.7
SMC4-217ENST00000485867 CDK12Q9NYV4 1490 aaPredicted RBP10.7□□□□□ -0.7
SMC4-217ENST00000485867 CD46P15529 392 aa10.7□□□□□ -0.7
SMC4-217ENST00000485867 KCNA6P17658 529 aa10.7□□□□□ -0.7
SMC4-217ENST00000485867 ZNF772Q68DY9 489 aaPredicted RBP10.7□□□□□ -0.7
SMC4-217ENST00000485867 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
SMC4-217ENST00000485867 TET3O43151 1660 aa10.69□□□□□ -0.7
SMC4-217ENST00000485867 FGD6Q6ZV73 1430 aa10.69□□□□□ -0.7
SMC4-217ENST00000485867 PROSER2Q86WR7 435 aaPredicted RBP10.69□□□□□ -0.7
SMC4-217ENST00000485867 FAM160A2Q8N612 972 aaPredicted RBP10.69□□□□□ -0.7
SMC4-217ENST00000485867 EID1Q9Y6B2 187 aa10.69□□□□□ -0.7
SMC4-217ENST00000485867 MAST1Q9Y2H9 1570 aa10.69□□□□□ -0.7
SMC4-217ENST00000485867 MSH6P52701 1360 aa10.68□□□□□ -0.7
SMC4-217ENST00000485867 TMEM2Q9UHN6 1383 aa10.68□□□□□ -0.7
SMC4-217ENST00000485867 SPATA31A6Q5VVP1 1343 aa10.68□□□□□ -0.7
SMC4-217ENST00000485867 FMNL1O95466 1100 aaPredicted RBP10.68□□□□□ -0.7
SMC4-217ENST00000485867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMC4-217ENST00000485867 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
SMC4-217ENST00000485867 AHDC1Q5TGY3 1603 aaPredicted RBP10.67□□□□□ -0.7
SMC4-217ENST00000485867 PRR20EP86478 221 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 PRR20CP86479 221 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 PRR20DP86480 221 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 PRR20BP86481 221 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 PRR20AP86496 221 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
SMC4-217ENST00000485867 ZNF697Q5TEC3 545 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
SMC4-217ENST00000485867 BRICD5Q6PL45 260 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 SLAIN2Q9P270 581 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 ARHGAP31Q2M1Z3 1444 aa10.67□□□□□ -0.7
SMC4-217ENST00000485867 CHD2O14647 1828 aaKnown RBP10.66□□□□□ -0.7
SMC4-217ENST00000485867 RXRBP28702 533 aa10.66□□□□□ -0.7
SMC4-217ENST00000485867 EFCAB6Q5THR3 1501 aa10.66□□□□□ -0.7
SMC4-217ENST00000485867 GRIPAP1Q4V328 841 aa10.65□□□□□ -0.7
SMC4-217ENST00000485867 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.7
SMC4-217ENST00000485867 GDF9O60383 454 aa10.64□□□□□ -0.71
SMC4-217ENST00000485867 SLC26A8Q96RN1 970 aa10.64□□□□□ -0.71
SMC4-217ENST00000485867 PRDM9Q9NQV7 894 aa10.64□□□□□ -0.71
SMC4-217ENST00000485867 FCF1Q9Y324 198 aaKnown RBP10.64□□□□□ -0.71
SMC4-217ENST00000485867 DIP2AQ14689 1571 aa10.64□□□□□ -0.71
SMC4-217ENST00000485867 KDM4AO75164 1064 aa10.63□□□□□ -0.71
SMC4-217ENST00000485867 TSPY4P0CV99 314 aa10.63□□□□□ -0.71
SMC4-217ENST00000485867 TSPY10P0CW01 314 aa10.63□□□□□ -0.71
SMC4-217ENST00000485867 MSS51Q4VC12 460 aa10.63□□□□□ -0.71
SMC4-217ENST00000485867 RGS12O14924 1447 aa10.63□□□□□ -0.71
SMC4-217ENST00000485867 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.61□□□□□ -0.71
SMC4-217ENST00000485867 RPIAP49247 311 aa10.61□□□□□ -0.71
SMC4-217ENST00000485867 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
SMC4-217ENST00000485867 ADGRB3O60242 1522 aa10.61□□□□□ -0.71
SMC4-217ENST00000485867 DUOX2Q9NRD8 1548 aa10.61□□□□□ -0.71
SMC4-217ENST00000485867 MYO5BQ9ULV0 1848 aa10.61□□□□□ -0.71
SMC4-217ENST00000485867 TNFRSF10AO00220 468 aa10.6□□□□□ -0.71
SMC4-217ENST00000485867 Q3C1V9 767 aa10.6□□□□□ -0.71
SMC4-217ENST00000485867 GPCPD1Q9NPB8 672 aa10.6□□□□□ -0.71
SMC4-217ENST00000485867 AFF2P51816 1311 aa10.59□□□□□ -0.71
SMC4-217ENST00000485867 CLCN1P35523 988 aa10.59□□□□□ -0.71
SMC4-217ENST00000485867 USP46P62068 366 aa10.59□□□□□ -0.71
SMC4-217ENST00000485867 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
SMC4-217ENST00000485867 PKD2L1Q9P0L9 805 aa10.59□□□□□ -0.71
SMC4-217ENST00000485867 SETBP1Q9Y6X0 1596 aa10.59□□□□□ -0.71
SMC4-217ENST00000485867 DGAT1O75907 488 aa10.58□□□□□ -0.72
SMC4-217ENST00000485867 IDI1Q13907 227 aa10.58□□□□□ -0.72
SMC4-217ENST00000485867 HLA-CQ95604 372 aa10.58□□□□□ -0.72
SMC4-217ENST00000485867 NCOA3Q9Y6Q9 1424 aa10.58□□□□□ -0.72
SMC4-217ENST00000485867 NUTM2BA6NNL0 878 aaPredicted RBP10.57□□□□□ -0.72
SMC4-217ENST00000485867 NUTM2EB1AL46 878 aaPredicted RBP10.57□□□□□ -0.72
SMC4-217ENST00000485867 HOXA2O43364 376 aa10.57□□□□□ -0.72
SMC4-217ENST00000485867 PKDCCQ504Y2 493 aa10.57□□□□□ -0.72
SMC4-217ENST00000485867 NUTM2AQ8IVF1 878 aaPredicted RBP10.57□□□□□ -0.72
SMC4-217ENST00000485867 NHSL1Q5SYE7 1610 aa10.56□□□□□ -0.72
SMC4-217ENST00000485867 MMP16P51512 607 aa10.56□□□□□ -0.72
SMC4-217ENST00000485867 MYT1Q01538 1121 aa10.56□□□□□ -0.72
SMC4-217ENST00000485867 LMTK2Q8IWU2 1503 aa10.56□□□□□ -0.72
SMC4-217ENST00000485867 ERBINQ96RT1 1412 aa10.56□□□□□ -0.72
SMC4-217ENST00000485867 CROCC2H7BZ55 1655 aa10.56□□□□□ -0.72
SMC4-217ENST00000485867 PLEKHG1Q9ULL1 1385 aa10.55□□□□□ -0.72
SMC4-217ENST00000485867 RBM6P78332 1123 aaKnown RBP10.55□□□□□ -0.72
SMC4-217ENST00000485867 NUTM2DQ5VT03 806 aaPredicted RBP10.55□□□□□ -0.72
SMC4-217ENST00000485867 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
SMC4-217ENST00000485867 ZFYVE9O95405 1425 aa10.55□□□□□ -0.72
SMC4-217ENST00000485867 NOS1P29475 1434 aa10.55□□□□□ -0.72
SMC4-217ENST00000485867 ATAD2Q6PL18 1390 aa10.54□□□□□ -0.72
SMC4-217ENST00000485867 KIF15Q9NS87 1388 aa10.54□□□□□ -0.72
SMC4-217ENST00000485867 GCC2Q8IWJ2 1684 aa10.54□□□□□ -0.72
SMC4-217ENST00000485867 CD2BP2O95400 341 aaKnown RBP10.54□□□□□ -0.72
SMC4-217ENST00000485867 FOXC1Q12948 553 aa10.54□□□□□ -0.72
SMC4-217ENST00000485867 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
SMC4-217ENST00000485867 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
SMC4-217ENST00000485867 SETD5Q9C0A6 1442 aa10.54□□□□□ -0.72
SMC4-217ENST00000485867 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
SMC4-217ENST00000485867 FAM187AA6NFU0 413 aa10.53□□□□□ -0.72
SMC4-217ENST00000485867 ZMYND10O75800 440 aa10.53□□□□□ -0.72
SMC4-217ENST00000485867 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
SMC4-217ENST00000485867 BRINP3Q76B58 766 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms