RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 NUP160Q12769 1436 aa6.19□□□□□ -1.42
SMARCC1-206ENST00000485737 PRAG1Q86YV5 1406 aa6.19□□□□□ -1.42
SMARCC1-206ENST00000485737 ZNF697Q5TEC3 545 aa6.19□□□□□ -1.42
SMARCC1-206ENST00000485737 SPRYD7Q5W111 196 aa6.19□□□□□ -1.42
SMARCC1-206ENST00000485737 CCDC24Q8N4L8 307 aa6.19□□□□□ -1.42
SMARCC1-206ENST00000485737 TBC1D2Q9BYX2 928 aa6.19□□□□□ -1.42
SMARCC1-206ENST00000485737 RCAN3Q9UKA8 241 aa6.19□□□□□ -1.42
SMARCC1-206ENST00000485737 SYNJ2O15056 1496 aa6.19□□□□□ -1.42
SMARCC1-206ENST00000485737 MAGI1Q96QZ7 1491 aaPredicted RBP6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 ZBTB24O43167 697 aaPredicted RBP6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 PRKCSHP14314 528 aaPredicted RBP6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 PRR20EP86478 221 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 PRR20CP86479 221 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 PRR20DP86480 221 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 PRR20BP86481 221 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 PRR20AP86496 221 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 PKDCCQ504Y2 493 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 ZNF598Q86UK7 904 aaKnown RBP6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 EXOC6Q8TAG9 804 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 DDRGK1Q96HY6 314 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 PCDHGC3Q9UN70 934 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 FAM135AQ9P2D6 1515 aa6.18□□□□□ -1.42
SMARCC1-206ENST00000485737 ATP10AO60312 1499 aa6.17□□□□□ -1.42
SMARCC1-206ENST00000485737 CCDC141Q6ZP82 1450 aa6.17□□□□□ -1.42
SMARCC1-206ENST00000485737 TNFRSF10AO00220 468 aa6.17□□□□□ -1.42
SMARCC1-206ENST00000485737 DIXDC1Q155Q3 683 aa6.17□□□□□ -1.42
SMARCC1-206ENST00000485737 CSPP1Q1MSJ5 1256 aa6.17□□□□□ -1.42
SMARCC1-206ENST00000485737 CARD11Q9BXL7 1154 aa6.17□□□□□ -1.42
SMARCC1-206ENST00000485737 CFDP1Q9UEE9 299 aaPredicted RBP6.17□□□□□ -1.42
SMARCC1-206ENST00000485737 PLB1Q6P1J6 1458 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 MAGI2Q86UL8 1455 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 PLXNC1O60486 1568 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 MMP16P51512 607 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 FOXC1Q12948 553 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 RETREG3Q86VR2 466 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 IQGAP3Q86VI3 1631 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 KDM2BQ8NHM5 1336 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 NUP155O75694 1391 aa6.16□□□□□ -1.42
SMARCC1-206ENST00000485737 A2MP01023 1474 aa6.15□□□□□ -1.42
SMARCC1-206ENST00000485737 PREX2Q70Z35 1606 aa6.15□□□□□ -1.42
SMARCC1-206ENST00000485737 DXOO77932 396 aaKnown RBP6.15□□□□□ -1.42
SMARCC1-206ENST00000485737 CD2BP2O95400 341 aaKnown RBP6.15□□□□□ -1.42
SMARCC1-206ENST00000485737 JUNDP17535 347 aa6.15□□□□□ -1.42
SMARCC1-206ENST00000485737 RSBN1LQ6PCB5 846 aaPredicted RBP6.15□□□□□ -1.42
SMARCC1-206ENST00000485737 GPBP1L1Q9HC44 474 aaPredicted RBP6.15□□□□□ -1.42
SMARCC1-206ENST00000485737 ABCC2Q92887 1545 aa6.15□□□□□ -1.43
SMARCC1-206ENST00000485737 SYNMO15061 1565 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 ST20-MTHFSA0A0A6YYL1 179 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 PER1O15534 1290 aaPredicted RBP6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 NEFMP07197 916 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 RPIAP49247 311 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 MTMR2Q13614 643 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 RIC3Q7Z5B4 369 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 PRR7Q8TB68 274 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 EIF3AQ14152 1382 aaKnown RBP6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 CARMIL2Q6F5E8 1435 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 ERBINQ96RT1 1412 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 PLA2R1Q13018 1463 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 SAMD9LQ8IVG5 1584 aa6.14□□□□□ -1.43
SMARCC1-206ENST00000485737 TRIM67Q6ZTA4 783 aa6.13□□□□□ -1.43
SMARCC1-206ENST00000485737 CENPQQ7L2Z9 268 aaPredicted RBP6.13□□□□□ -1.43
SMARCC1-206ENST00000485737 IL27Q8NEV9 243 aa6.13□□□□□ -1.43
SMARCC1-206ENST00000485737 TSC1Q92574 1164 aa6.13□□□□□ -1.43
SMARCC1-206ENST00000485737 NUDT12Q9BQG2 462 aa6.13□□□□□ -1.43
SMARCC1-206ENST00000485737 PCDHB15Q9Y5E8 787 aa6.13□□□□□ -1.43
SMARCC1-206ENST00000485737 CCDC144AA2RUR9 1427 aa6.13□□□□□ -1.43
SMARCC1-206ENST00000485737 IQGAP1P46940 1657 aa6.13□□□□□ -1.43
SMARCC1-206ENST00000485737 SPTLC1O15269 473 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 PIK3C2GO75747 1445 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 ZNF326Q5BKZ1 582 aaKnown RBP6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 MYSM1Q5VVJ2 828 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 ZNF521Q96K83 1311 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 POLR3GLQ9BT43 218 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 KDM4CQ9H3R0 1056 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 MYO5CQ9NQX4 1742 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 DUOX2Q9NRD8 1548 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 DISP3Q9P2K9 1392 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 NPC1L1Q9UHC9 1359 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 WDR7Q9Y4E6 1490 aa6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 LAS1LQ9Y4W2 734 aaKnown RBP6.12□□□□□ -1.43
SMARCC1-206ENST00000485737 VIRMAQ69YN4 1812 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 MADDQ8WXG6 1647 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 NEURL4Q96JN8 1562 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 ATP10BO94823 1461 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 ZMYM3Q14202 1370 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 FAM187AA6NFU0 413 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 SPDYE5A6NIY4 337 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 NUTM2BA6NNL0 878 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 NUTM2EB1AL46 878 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 TRIM32Q13049 653 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 NUTM2DQ5VT03 806 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 NPM2Q86SE8 214 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 NUTM2AQ8IVF1 878 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 CABLES1Q8TDN4 633 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 ZNF775Q96BV0 537 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 TESK2Q96S53 571 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 CRBNQ96SW2 442 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 ZBTB3Q9H5J0 574 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 POLR3EQ9NVU0 708 aa6.11□□□□□ -1.43
SMARCC1-206ENST00000485737 LIMD1Q9UGP4 676 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms