RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 PARP4Q9UKK3 1724 aaKnown RBP21.11■□□□□ 0.97
ZNF248-206ENST00000485560 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
ZNF248-206ENST00000485560 TATP17735 454 aaPredicted RBP21.1■□□□□ 0.97
ZNF248-206ENST00000485560 LMOD3Q0VAK6 560 aa21.1■□□□□ 0.97
ZNF248-206ENST00000485560 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
ZNF248-206ENST00000485560 C8orf37Q96NL8 207 aa21.1■□□□□ 0.97
ZNF248-206ENST00000485560 DCTN1Q14203 1278 aa21.09■□□□□ 0.97
ZNF248-206ENST00000485560 AMOTQ4VCS5 1084 aa21.09■□□□□ 0.97
ZNF248-206ENST00000485560 THUMPD2Q9BTF0 503 aaKnown RBP21.09■□□□□ 0.97
ZNF248-206ENST00000485560 PKD1L3Q7Z443 1732 aa21.09■□□□□ 0.97
ZNF248-206ENST00000485560 NGLY1Q96IV0 654 aa21.09■□□□□ 0.97
ZNF248-206ENST00000485560 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
ZNF248-206ENST00000485560 E9PSI1 815 aa21.08■□□□□ 0.97
ZNF248-206ENST00000485560 DUSP27Q5VZP5 1158 aa21.08■□□□□ 0.97
ZNF248-206ENST00000485560 TRMT2AQ8IZ69 625 aaKnown RBP21.08■□□□□ 0.97
ZNF248-206ENST00000485560 MAP3K5Q99683 1374 aa21.07■□□□□ 0.96
ZNF248-206ENST00000485560 GNAT3A8MTJ3 354 aa21.07■□□□□ 0.96
ZNF248-206ENST00000485560 ZNF530Q6P9A1 599 aaPredicted RBP21.07■□□□□ 0.96
ZNF248-206ENST00000485560 MCM10Q7L590 875 aa21.07■□□□□ 0.96
ZNF248-206ENST00000485560 WNK3Q9BYP7 1800 aa21.06■□□□□ 0.96
ZNF248-206ENST00000485560 OVOS2A0A0G2JMS6 1433 aa21.06■□□□□ 0.96
ZNF248-206ENST00000485560 PLEKHG2Q9H7P9 1386 aa21.05■□□□□ 0.96
ZNF248-206ENST00000485560 IL16Q14005 1332 aa21.05■□□□□ 0.96
ZNF248-206ENST00000485560 IL2RBP14784 551 aa21.05■□□□□ 0.96
ZNF248-206ENST00000485560 RTF1Q92541 710 aaKnown RBP21.05■□□□□ 0.96
ZNF248-206ENST00000485560 BCL9LQ86UU0 1499 aa21.05■□□□□ 0.96
ZNF248-206ENST00000485560 HTATSF1O43719 755 aaKnown RBP21.04■□□□□ 0.96
ZNF248-206ENST00000485560 MEX3CQ5U5Q3 659 aaKnown RBP21.04■□□□□ 0.96
ZNF248-206ENST00000485560 FNBP4Q8N3X1 1017 aaPredicted RBP21.04■□□□□ 0.96
ZNF248-206ENST00000485560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.961e-6■■■□□ 14.8
ZNF248-206ENST00000485560 AKAP4Q5JQC9 854 aa21.04■□□□□ 0.96
ZNF248-206ENST00000485560 UNC5CLQ8IV45 518 aa21.04■□□□□ 0.96
ZNF248-206ENST00000485560 SPG7Q9UQ90 795 aa21.04■□□□□ 0.96
ZNF248-206ENST00000485560 SHANK3Q9BYB0 1731 aa21.03■□□□□ 0.96
ZNF248-206ENST00000485560 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.03■□□□□ 0.96
ZNF248-206ENST00000485560 LRRC37A3O60309 1634 aa21.03■□□□□ 0.96
ZNF248-206ENST00000485560 CALD1Q05682 793 aaKnown RBP21.03■□□□□ 0.96
ZNF248-206ENST00000485560 C1orf141Q5JVX7 400 aa21.02■□□□□ 0.96
ZNF248-206ENST00000485560 SPATA31A1Q5TZJ5 1347 aa21.02■□□□□ 0.96
ZNF248-206ENST00000485560 IL17REQ8NFR9 667 aa21.01■□□□□ 0.95
ZNF248-206ENST00000485560 MYH16Q9H6N6 1097 aa21.01■□□□□ 0.95
ZNF248-206ENST00000485560 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
ZNF248-206ENST00000485560 DISP2A7MBM2 1401 aa21■□□□□ 0.95
ZNF248-206ENST00000485560 SPATA31A5Q5VU36 1347 aa21■□□□□ 0.95
ZNF248-206ENST00000485560 SPATA31A7Q8IWB4 1347 aa21■□□□□ 0.95
ZNF248-206ENST00000485560 TSR2Q969E8 191 aaKnown RBP21■□□□□ 0.95
ZNF248-206ENST00000485560 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
ZNF248-206ENST00000485560 ZNF853P0CG23 659 aa20.99■□□□□ 0.95
ZNF248-206ENST00000485560 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
ZNF248-206ENST00000485560 IFT57Q9NWB7 429 aa20.99■□□□□ 0.95
ZNF248-206ENST00000485560 USP21Q9UK80 565 aa20.99■□□□□ 0.95
ZNF248-206ENST00000485560 CCDC9Q9Y3X0 531 aaKnown RBP20.99■□□□□ 0.95
ZNF248-206ENST00000485560 FANCIQ9NVI1 1328 aa20.99■□□□□ 0.95
ZNF248-206ENST00000485560 ADAMTS7Q9UKP4 1686 aa20.99■□□□□ 0.95
ZNF248-206ENST00000485560 CYP27B1O15528 508 aa20.98■□□□□ 0.95
ZNF248-206ENST00000485560 PHKG2P15735 406 aa20.98■□□□□ 0.95
ZNF248-206ENST00000485560 MPRIPQ6WCQ1 1025 aa20.98■□□□□ 0.95
ZNF248-206ENST00000485560 LGR6Q9HBX8 967 aa20.98■□□□□ 0.95
ZNF248-206ENST00000485560 GNAI1P63096 354 aa20.98■□□□□ 0.95
ZNF248-206ENST00000485560 IFNL2Q8IZJ0 200 aa20.98■□□□□ 0.95
ZNF248-206ENST00000485560 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
ZNF248-206ENST00000485560 CEMIPQ8WUJ3 1361 aa20.97■□□□□ 0.95
ZNF248-206ENST00000485560 VPS72Q15906 364 aa20.97■□□□□ 0.95
ZNF248-206ENST00000485560 THRAP3Q9Y2W1 955 aaKnown RBP20.97■□□□□ 0.95
ZNF248-206ENST00000485560 AFF2P51816 1311 aa20.97■□□□□ 0.95
ZNF248-206ENST00000485560 PCDH11XQ9BZA7 1347 aa20.96■□□□□ 0.95
ZNF248-206ENST00000485560 PCDH11YQ9BZA8 1340 aa20.96■□□□□ 0.95
ZNF248-206ENST00000485560 RNMTO43148 476 aaKnown RBP20.95■□□□□ 0.94
ZNF248-206ENST00000485560 MBIPQ9NS73 344 aa20.95■□□□□ 0.94
ZNF248-206ENST00000485560 SIPA1L3O60292 1781 aaPredicted RBP20.95■□□□□ 0.94
ZNF248-206ENST00000485560 KDM6AO15550 1401 aaPredicted RBP20.94■□□□□ 0.94
ZNF248-206ENST00000485560 CHL1O00533 1208 aa20.94■□□□□ 0.94
ZNF248-206ENST00000485560 BARGINQ6ZT62 677 aa20.93■□□□□ 0.94
ZNF248-206ENST00000485560 RCAN3Q9UKA8 241 aa20.93■□□□□ 0.94
ZNF248-206ENST00000485560 SUPT16HQ9Y5B9 1047 aaKnown RBP20.93■□□□□ 0.94
ZNF248-206ENST00000485560 EXOSC9Q06265 439 aaKnown RBP20.92■□□□□ 0.94
ZNF248-206ENST00000485560 DDX54Q8TDD1 881 aaKnown RBP20.92■□□□□ 0.94
ZNF248-206ENST00000485560 CDCA7Q9BWT1 371 aaPredicted RBP20.92■□□□□ 0.94
ZNF248-206ENST00000485560 MIS18AQ9NYP9 233 aa20.92■□□□□ 0.94
ZNF248-206ENST00000485560 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
ZNF248-206ENST00000485560 HSP90AB1P08238 724 aaKnown RBP20.9■□□□□ 0.94
ZNF248-206ENST00000485560 TEFQ10587 303 aa20.9■□□□□ 0.94
ZNF248-206ENST00000485560 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
ZNF248-206ENST00000485560 TNS2Q63HR2 1409 aa20.9■□□□□ 0.94
ZNF248-206ENST00000485560 KDM3BQ7LBC6 1761 aa20.9■□□□□ 0.94
ZNF248-206ENST00000485560 EXOC5O00471 708 aa20.9■□□□□ 0.94
ZNF248-206ENST00000485560 TSPYL4Q9UJ04 414 aa20.9■□□□□ 0.94
ZNF248-206ENST00000485560 GLI3P10071 1580 aa20.89■□□□□ 0.94
ZNF248-206ENST00000485560 FAM98CQ17RN3 349 aaKnown RBP20.89■□□□□ 0.93
ZNF248-206ENST00000485560 ATRNO75882 1429 aa20.88■□□□□ 0.93
ZNF248-206ENST00000485560 NKX1-1Q15270 411 aaPredicted RBP20.88■□□□□ 0.93
ZNF248-206ENST00000485560 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
ZNF248-206ENST00000485560 MRC1P22897 1456 aa20.87■□□□□ 0.93
ZNF248-206ENST00000485560 DDB1Q16531 1140 aa20.87■□□□□ 0.93
ZNF248-206ENST00000485560 GJD4Q96KN9 370 aaPredicted RBP20.87■□□□□ 0.93
ZNF248-206ENST00000485560 BABAM1Q9NWV8 329 aa20.87■□□□□ 0.93
ZNF248-206ENST00000485560 TRPC5Q9UL62 973 aaPredicted RBP20.87■□□□□ 0.93
ZNF248-206ENST00000485560 KAT6BQ8WYB5 2073 aa20.86■□□□□ 0.93
ZNF248-206ENST00000485560 SLC52A2Q9HAB3 445 aa20.86■□□□□ 0.93
ZNF248-206ENST00000485560 TSPYL6Q8N831 410 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms