RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 NLGN2Q8NFZ4 835 aa15□□□□□ -0.01
HMGN1-215ENST00000485550 TMC1Q8TDI8 760 aa15□□□□□ -0.01
HMGN1-215ENST00000485550 ZBTB22O15209 634 aa14.99□□□□□ -0.01
HMGN1-215ENST00000485550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.01
HMGN1-215ENST00000485550 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
HMGN1-215ENST00000485550 MON2Q7Z3U7 1717 aa14.99□□□□□ -0.01
HMGN1-215ENST00000485550 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
HMGN1-215ENST00000485550 KTN1Q86UP2 1357 aaKnown RBP14.98□□□□□ -0.01
HMGN1-215ENST00000485550 PNPLA7Q6ZV29 1317 aa14.97□□□□□ -0.01
HMGN1-215ENST00000485550 IL2RBP14784 551 aa14.97□□□□□ -0.01
HMGN1-215ENST00000485550 KCNQ4P56696 695 aa14.97□□□□□ -0.01
HMGN1-215ENST00000485550 SLC16A10Q8TF71 515 aa14.97□□□□□ -0.01
HMGN1-215ENST00000485550 LY75O60449 1722 aa14.97□□□□□ -0.01
HMGN1-215ENST00000485550 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
HMGN1-215ENST00000485550 TTC21AQ8NDW8 1320 aa14.96□□□□□ -0.01
HMGN1-215ENST00000485550 TRIM26Q12899 539 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-215ENST00000485550 SLC12A5Q9H2X9 1139 aa14.96□□□□□ -0.01
HMGN1-215ENST00000485550 ERBB3P21860 1342 aa14.95□□□□□ -0.02
HMGN1-215ENST00000485550 YBX3P16989 372 aaKnown RBP eCLIP14.95□□□□□ -0.02
HMGN1-215ENST00000485550 TFCP2L1Q9NZI6 479 aa14.95□□□□□ -0.02
HMGN1-215ENST00000485550 USP54Q70EL1 1684 aa14.95□□□□□ -0.02
HMGN1-215ENST00000485550 RGPD2P0DJD1 1756 aa14.94□□□□□ -0.02
HMGN1-215ENST00000485550 NME9Q86XW9 330 aa14.94□□□□□ -0.02
HMGN1-215ENST00000485550 HDGFL2Q7Z4V5 671 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-215ENST00000485550 ATP10DQ9P241 1426 aa14.92□□□□□ -0.02
HMGN1-215ENST00000485550 SLC27A3Q5K4L6 730 aa14.92□□□□□ -0.02
HMGN1-215ENST00000485550 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
HMGN1-215ENST00000485550 SBNO2Q9Y2G9 1366 aa14.91□□□□□ -0.02
HMGN1-215ENST00000485550 ST20-MTHFSA0A0A6YYL1 179 aa14.91□□□□□ -0.02
HMGN1-215ENST00000485550 GRIN3BO60391 1043 aa14.91□□□□□ -0.02
HMGN1-215ENST00000485550 DDX54Q8TDD1 881 aaKnown RBP14.91□□□□□ -0.02
HMGN1-215ENST00000485550 SYTL4Q96C24 671 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-215ENST00000485550 FAM208AQ9UK61 1670 aaKnown RBP14.9□□□□□ -0.02
HMGN1-215ENST00000485550 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
HMGN1-215ENST00000485550 TERF2IPQ9NYB0 399 aa14.89□□□□□ -0.03
HMGN1-215ENST00000485550 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
HMGN1-215ENST00000485550 USP31Q70CQ4 1352 aa14.88□□□□□ -0.03
HMGN1-215ENST00000485550 MSL1Q68DK7 614 aa14.88□□□□□ -0.03
HMGN1-215ENST00000485550 ZNF526Q8TF50 670 aaPredicted RBP14.88□□□□□ -0.03
HMGN1-215ENST00000485550 TESK2Q96S53 571 aa14.88□□□□□ -0.03
HMGN1-215ENST00000485550 GPBP1L1Q9HC44 474 aaPredicted RBP14.88□□□□□ -0.03
HMGN1-215ENST00000485550 C5P01031 1676 aa14.87□□□□□ -0.03
HMGN1-215ENST00000485550 PRIM1P49642 420 aaKnown RBP14.87□□□□□ -0.03
HMGN1-215ENST00000485550 LTV1Q96GA3 475 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-215ENST00000485550 CD163L1Q9NR16 1453 aa14.87□□□□□ -0.03
HMGN1-215ENST00000485550 HSPA6P17066 643 aa14.86□□□□□ -0.03
HMGN1-215ENST00000485550 COL23A1Q86Y22 540 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-215ENST00000485550 A0A1W2PP64 1363 aa14.85□□□□□ -0.03
HMGN1-215ENST00000485550 NSD2O96028 1365 aa14.85□□□□□ -0.03
HMGN1-215ENST00000485550 PUS7Q96PZ0 661 aaKnown RBP14.85□□□□□ -0.03
HMGN1-215ENST00000485550 CCNL1Q9UK58 526 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-215ENST00000485550 ANKRD36BQ8N2N9 1353 aa14.85□□□□□ -0.03
HMGN1-215ENST00000485550 FBLN1P23142 703 aa14.84□□□□□ -0.03
HMGN1-215ENST00000485550 WWC3Q9ULE0 1092 aa14.83□□□□□ -0.04
HMGN1-215ENST00000485550 ADCY9O60503 1353 aa14.83□□□□□ -0.04
HMGN1-215ENST00000485550 EDC4Q6P2E9 1401 aaKnown RBP14.83□□□□□ -0.04
HMGN1-215ENST00000485550 ITGB4P16144 1822 aa14.81□□□□□ -0.04
HMGN1-215ENST00000485550 IP6K1Q92551 441 aa14.81□□□□□ -0.04
HMGN1-215ENST00000485550 COG3Q96JB2 828 aa14.81□□□□□ -0.04
HMGN1-215ENST00000485550 PCGF6Q9BYE7 350 aa14.81□□□□□ -0.04
HMGN1-215ENST00000485550 UBR3Q6ZT12 1888 aa14.8□□□□□ -0.04
HMGN1-215ENST00000485550 TMF1P82094 1093 aa14.8□□□□□ -0.04
HMGN1-215ENST00000485550 USP47Q96K76 1375 aa14.8□□□□□ -0.04
HMGN1-215ENST00000485550 MEGF6O75095 1541 aa14.8□□□□□ -0.04
HMGN1-215ENST00000485550 SLC24A1O60721 1099 aa14.79□□□□□ -0.04
HMGN1-215ENST00000485550 ZCRB1Q8TBF4 217 aaKnown RBP14.79□□□□□ -0.04
HMGN1-215ENST00000485550 CD2APQ9Y5K6 639 aa14.79□□□□□ -0.04
HMGN1-215ENST00000485550 TOGARAM1Q9Y4F4 1720 aa14.78□□□□□ -0.04
HMGN1-215ENST00000485550 GGNBP2Q9H3C7 697 aa14.78□□□□□ -0.04
HMGN1-215ENST00000485550 AMPHP49418 695 aa14.77□□□□□ -0.05
HMGN1-215ENST00000485550 C4BP0C0L5 1744 aa14.77□□□□□ -0.05
HMGN1-215ENST00000485550 MAP3K19Q56UN5 1328 aa14.76□□□□□ -0.05
HMGN1-215ENST00000485550 IGSF1Q8N6C5 1336 aa14.76□□□□□ -0.05
HMGN1-215ENST00000485550 RRS1Q15050 365 aaKnown RBP14.76□□□□□ -0.05
HMGN1-215ENST00000485550 N4BP2Q86UW6 1770 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-215ENST00000485550 KIF3CO14782 793 aa14.75□□□□□ -0.05
HMGN1-215ENST00000485550 FYB1O15117 783 aa14.75□□□□□ -0.05
HMGN1-215ENST00000485550 HOXC9P31274 260 aa14.75□□□□□ -0.05
HMGN1-215ENST00000485550 SMIM5Q71RC9 77 aa14.74□□□□□ -0.05
HMGN1-215ENST00000485550 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
HMGN1-215ENST00000485550 AMIGO3Q86WK7 504 aa14.73□□□□□ -0.05
HMGN1-215ENST00000485550 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
HMGN1-215ENST00000485550 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
HMGN1-215ENST00000485550 PHF14O94880 888 aa14.72□□□□□ -0.05
HMGN1-215ENST00000485550 FLAD1Q8NFF5 587 aa14.72□□□□□ -0.05
HMGN1-215ENST00000485550 CDCA8Q53HL2 280 aa14.71□□□□□ -0.05
HMGN1-215ENST00000485550 NBPF6Q5VWK0 638 aa14.71□□□□□ -0.05
HMGN1-215ENST00000485550 NBPF4Q96M43 638 aa14.71□□□□□ -0.05
HMGN1-215ENST00000485550 POLR3GLQ9BT43 218 aa14.71□□□□□ -0.05
HMGN1-215ENST00000485550 MAP2P11137 1827 aaKnown RBP14.71□□□□□ -0.06
HMGN1-215ENST00000485550 KIF13BQ9NQT8 1826 aa14.71□□□□□ -0.06
HMGN1-215ENST00000485550 APLP1P51693 650 aa14.7□□□□□ -0.06
HMGN1-215ENST00000485550 MPRIPQ6WCQ1 1025 aa14.7□□□□□ -0.06
HMGN1-215ENST00000485550 AK7Q96M32 723 aa14.7□□□□□ -0.06
HMGN1-215ENST00000485550 CARD14Q9BXL6 1004 aa14.7□□□□□ -0.06
HMGN1-215ENST00000485550 CICQ96RK0 1608 aaPredicted RBP14.7□□□□□ -0.06
HMGN1-215ENST00000485550 KIAA1551Q9HCM1 1747 aa14.69□□□□□ -0.06
HMGN1-215ENST00000485550 RAPGEF4Q8WZA2 1011 aa14.69□□□□□ -0.06
HMGN1-215ENST00000485550 TIMELESSQ9UNS1 1208 aa14.69□□□□□ -0.06
HMGN1-215ENST00000485550 HSP90AB2PQ58FF8 381 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms