RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-206ENST00000485494 NEUROD2Q15784 382 aa16.76■□□□□ 0.27
SFMBT1-206ENST00000485494 PLEKHO1Q53GL0 409 aaPredicted RBP16.76■□□□□ 0.27
SFMBT1-206ENST00000485494 IFT57Q9NWB7 429 aa16.76■□□□□ 0.27
SFMBT1-206ENST00000485494 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
SFMBT1-206ENST00000485494 WNK3Q9BYP7 1800 aa16.75■□□□□ 0.27
SFMBT1-206ENST00000485494 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
SFMBT1-206ENST00000485494 RTF1Q92541 710 aaKnown RBP16.75■□□□□ 0.27
SFMBT1-206ENST00000485494 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
SFMBT1-206ENST00000485494 NRAPQ86VF7 1730 aa16.74■□□□□ 0.27
SFMBT1-206ENST00000485494 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
SFMBT1-206ENST00000485494 NEFLP07196 543 aa16.74■□□□□ 0.27
SFMBT1-206ENST00000485494 CDCA7LQ96GN5 454 aa16.74■□□□□ 0.27
SFMBT1-206ENST00000485494 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
SFMBT1-206ENST00000485494 MAP3K5Q99683 1374 aa16.74■□□□□ 0.27
SFMBT1-206ENST00000485494 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.73■□□□□ 0.27
SFMBT1-206ENST00000485494 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
SFMBT1-206ENST00000485494 MEX3CQ5U5Q3 659 aaKnown RBP16.73■□□□□ 0.27
SFMBT1-206ENST00000485494 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
SFMBT1-206ENST00000485494 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
SFMBT1-206ENST00000485494 CARD10Q9BWT7 1032 aa16.73■□□□□ 0.27
SFMBT1-206ENST00000485494 RCAN3Q9UKA8 241 aa16.73■□□□□ 0.27
SFMBT1-206ENST00000485494 LRP6O75581 1613 aa16.73■□□□□ 0.27
SFMBT1-206ENST00000485494 CRB1P82279 1406 aa16.72■□□□□ 0.27
SFMBT1-206ENST00000485494 SIPA1L3O60292 1781 aaPredicted RBP16.72■□□□□ 0.27
SFMBT1-206ENST00000485494 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
SFMBT1-206ENST00000485494 MTHFSDQ2M296 383 aaKnown RBP16.72■□□□□ 0.27
SFMBT1-206ENST00000485494 SOS1Q07889 1333 aaPredicted RBP16.71■□□□□ 0.27
SFMBT1-206ENST00000485494 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
SFMBT1-206ENST00000485494 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
SFMBT1-206ENST00000485494 AKAP4Q5JQC9 854 aa16.71■□□□□ 0.27
SFMBT1-206ENST00000485494 NLRP2Q9NX02 1062 aa16.71■□□□□ 0.27
SFMBT1-206ENST00000485494 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
SFMBT1-206ENST00000485494 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
SFMBT1-206ENST00000485494 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
SFMBT1-206ENST00000485494 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.7■□□□□ 0.26
SFMBT1-206ENST00000485494 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
SFMBT1-206ENST00000485494 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
SFMBT1-206ENST00000485494 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
SFMBT1-206ENST00000485494 EVA1CP58658 441 aa16.69■□□□□ 0.26
SFMBT1-206ENST00000485494 CHRNA2Q15822 529 aa16.69■□□□□ 0.26
SFMBT1-206ENST00000485494 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
SFMBT1-206ENST00000485494 CDCA7Q9BWT1 371 aaPredicted RBP16.69■□□□□ 0.26
SFMBT1-206ENST00000485494 CHMP4AQ9BY43 222 aa16.69■□□□□ 0.26
SFMBT1-206ENST00000485494 HSP90AB1P08238 724 aaKnown RBP16.68■□□□□ 0.26
SFMBT1-206ENST00000485494 C1orf141Q5JVX7 400 aa16.68■□□□□ 0.26
SFMBT1-206ENST00000485494 KDM3BQ7LBC6 1761 aa16.68■□□□□ 0.26
SFMBT1-206ENST00000485494 FANCIQ9NVI1 1328 aa16.68■□□□□ 0.26
SFMBT1-206ENST00000485494 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
SFMBT1-206ENST00000485494 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
SFMBT1-206ENST00000485494 THRAP3Q9Y2W1 955 aaKnown RBP16.67■□□□□ 0.26
SFMBT1-206ENST00000485494 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
SFMBT1-206ENST00000485494 SLIT2O94813 1529 aa16.66■□□□□ 0.26
SFMBT1-206ENST00000485494 CHL1O00533 1208 aa16.66■□□□□ 0.26
SFMBT1-206ENST00000485494 SHANK3Q9BYB0 1731 aa16.66■□□□□ 0.26
SFMBT1-206ENST00000485494 BTG4Q9NY30 223 aa16.65■□□□□ 0.26
SFMBT1-206ENST00000485494 PLEKHG5O94827 1062 aa16.64■□□□□ 0.25
SFMBT1-206ENST00000485494 IL2RBP14784 551 aa16.64■□□□□ 0.25
SFMBT1-206ENST00000485494 ZNF530Q6P9A1 599 aaPredicted RBP16.64■□□□□ 0.25
SFMBT1-206ENST00000485494 IFNL2Q8IZJ0 200 aa16.64■□□□□ 0.25
SFMBT1-206ENST00000485494 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
SFMBT1-206ENST00000485494 MEGF6O75095 1541 aa16.64■□□□□ 0.25
SFMBT1-206ENST00000485494 PCDH11XQ9BZA7 1347 aa16.64■□□□□ 0.25
SFMBT1-206ENST00000485494 PCDH11YQ9BZA8 1340 aa16.64■□□□□ 0.25
SFMBT1-206ENST00000485494 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
SFMBT1-206ENST00000485494 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
SFMBT1-206ENST00000485494 MRC1P22897 1456 aa16.62■□□□□ 0.25
SFMBT1-206ENST00000485494 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
SFMBT1-206ENST00000485494 RXRBP28702 533 aa16.62■□□□□ 0.25
SFMBT1-206ENST00000485494 TAF7Q15545 349 aaPredicted RBP16.62■□□□□ 0.25
SFMBT1-206ENST00000485494 GTF3C3Q9Y5Q9 886 aa16.62■□□□□ 0.25
SFMBT1-206ENST00000485494 MS4A1P11836 297 aa16.61■□□□□ 0.25
SFMBT1-206ENST00000485494 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
SFMBT1-206ENST00000485494 AFF2P51816 1311 aa16.61■□□□□ 0.25
SFMBT1-206ENST00000485494 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
SFMBT1-206ENST00000485494 MBIPQ9NS73 344 aa16.6■□□□□ 0.25
SFMBT1-206ENST00000485494 DISP2A7MBM2 1401 aa16.6■□□□□ 0.25
SFMBT1-206ENST00000485494 KAT6BQ8WYB5 2073 aa16.59■□□□□ 0.25
SFMBT1-206ENST00000485494 HOXB7P09629 217 aa16.59■□□□□ 0.25
SFMBT1-206ENST00000485494 PHKG2P15735 406 aa16.59■□□□□ 0.25
SFMBT1-206ENST00000485494 LARP1Q6PKG0 1096 aaKnown RBP16.59■□□□□ 0.25
SFMBT1-206ENST00000485494 MCM10Q7L590 875 aa16.59■□□□□ 0.25
SFMBT1-206ENST00000485494 FNBP4Q8N3X1 1017 aaPredicted RBP16.59■□□□□ 0.25
SFMBT1-206ENST00000485494 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
SFMBT1-206ENST00000485494 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
SFMBT1-206ENST00000485494 RNMTO43148 476 aaKnown RBP16.58■□□□□ 0.24
SFMBT1-206ENST00000485494 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
SFMBT1-206ENST00000485494 EXOSC9Q06265 439 aaKnown RBP16.58■□□□□ 0.24
SFMBT1-206ENST00000485494 TEFQ10587 303 aa16.58■□□□□ 0.24
SFMBT1-206ENST00000485494 AAMPQ13685 434 aa16.58■□□□□ 0.24
SFMBT1-206ENST00000485494 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
SFMBT1-206ENST00000485494 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
SFMBT1-206ENST00000485494 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
SFMBT1-206ENST00000485494 KIF16BQ96L93 1317 aa16.57■□□□□ 0.24
SFMBT1-206ENST00000485494 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
SFMBT1-206ENST00000485494 BARGINQ6ZT62 677 aa16.57■□□□□ 0.24
SFMBT1-206ENST00000485494 UNC5CLQ8IV45 518 aa16.57■□□□□ 0.24
SFMBT1-206ENST00000485494 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.24
SFMBT1-206ENST00000485494 TSR2Q969E8 191 aaKnown RBP16.57■□□□□ 0.24
SFMBT1-206ENST00000485494 ITGB4P16144 1822 aa16.56■□□□□ 0.24
SFMBT1-206ENST00000485494 SPATA31A1Q5TZJ5 1347 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms