RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
SRRM1-213ENST00000485441 CCDC102BQ68D86 513 aa9.19□□□□□ -0.94
SRRM1-213ENST00000485441 ZNF594Q96JF6 807 aaPredicted RBP9.19□□□□□ -0.94
SRRM1-213ENST00000485441 CCDC9Q9Y3X0 531 aaKnown RBP9.19□□□□□ -0.94
SRRM1-213ENST00000485441 VASH1Q7L8A9 365 aaPredicted RBP9.18□□□□□ -0.94
SRRM1-213ENST00000485441 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
SRRM1-213ENST00000485441 SCTRP47872 440 aa9.17□□□□□ -0.94
SRRM1-213ENST00000485441 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
SRRM1-213ENST00000485441 EHBP1Q8NDI1 1231 aa9.17□□□□□ -0.94
SRRM1-213ENST00000485441 IVNS1ABPQ9Y6Y0 642 aa9.17□□□□□ -0.94
SRRM1-213ENST00000485441 SEC13P55735 322 aa9.16□□□□□ -0.94
SRRM1-213ENST00000485441 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
SRRM1-213ENST00000485441 B4GALNT3Q6L9W6 998 aa9.16□□□□□ -0.94
SRRM1-213ENST00000485441 TPCN2Q8NHX9 752 aa9.15□□□□□ -0.94
SRRM1-213ENST00000485441 SFI1A8K8P3 1242 aa9.14□□□□□ -0.95
SRRM1-213ENST00000485441 WNT7AO00755 349 aa9.14□□□□□ -0.95
SRRM1-213ENST00000485441 OCLNQ16625 522 aa9.14□□□□□ -0.95
SRRM1-213ENST00000485441 TMCO4Q5TGY1 634 aa9.14□□□□□ -0.95
SRRM1-213ENST00000485441 C1orf216Q8TAB5 229 aa9.14□□□□□ -0.95
SRRM1-213ENST00000485441 M0R2N6 131 aa9.13□□□□□ -0.95
SRRM1-213ENST00000485441 LILRA1O75019 489 aa9.13□□□□□ -0.95
SRRM1-213ENST00000485441 SLC19A1P41440 591 aa9.13□□□□□ -0.95
SRRM1-213ENST00000485441 RAB15P59190 212 aa9.13□□□□□ -0.95
SRRM1-213ENST00000485441 TAS1R3Q7RTX0 852 aa9.13□□□□□ -0.95
SRRM1-213ENST00000485441 RGS22Q8NE09 1264 aa9.13□□□□□ -0.95
SRRM1-213ENST00000485441 OSBPL3Q9H4L5 887 aa9.13□□□□□ -0.95
SRRM1-213ENST00000485441 TMPRSS4Q9NRS4 437 aa9.13□□□□□ -0.95
SRRM1-213ENST00000485441 TMEM229AB2RXF0 380 aa9.12□□□□□ -0.95
SRRM1-213ENST00000485441 ATP2B4P23634 1241 aa9.12□□□□□ -0.95
SRRM1-213ENST00000485441 ARID4AP29374 1257 aaPredicted RBP9.12□□□□□ -0.95
SRRM1-213ENST00000485441 ARID5BQ14865 1188 aa9.12□□□□□ -0.95
SRRM1-213ENST00000485441 CC2D2BQ6DHV5 1058 aa9.12□□□□□ -0.95
SRRM1-213ENST00000485441 TLL2Q9Y6L7 1015 aa9.12□□□□□ -0.95
SRRM1-213ENST00000485441 MFAP1P55081 439 aaKnown RBP9.11□□□□□ -0.95
SRRM1-213ENST00000485441 SPRYD7Q5W111 196 aa9.11□□□□□ -0.95
SRRM1-213ENST00000485441 MRGPRX2Q96LB1 330 aa9.11□□□□□ -0.95
SRRM1-213ENST00000485441 ADH1CP00326 375 aa9.1□□□□□ -0.95
SRRM1-213ENST00000485441 MYCP01106 439 aaPredicted RBP9.1□□□□□ -0.95
SRRM1-213ENST00000485441 FSHRP23945 695 aa9.1□□□□□ -0.95
SRRM1-213ENST00000485441 SCNN1AP37088 669 aa9.1□□□□□ -0.95
SRRM1-213ENST00000485441 SCNN1DP51172 638 aa9.1□□□□□ -0.95
SRRM1-213ENST00000485441 NR5A1Q13285 461 aa9.1□□□□□ -0.95
SRRM1-213ENST00000485441 SND1Q7KZF4 910 aaKnown RBP eCLIP9.1□□□□□ -0.95
SRRM1-213ENST00000485441 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
SRRM1-213ENST00000485441 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
SRRM1-213ENST00000485441 NR3C2P08235 984 aa9.09□□□□□ -0.95
SRRM1-213ENST00000485441 WEE1P30291 646 aa9.09□□□□□ -0.95
SRRM1-213ENST00000485441 ADD1P35611 737 aaKnown RBP9.09□□□□□ -0.95
SRRM1-213ENST00000485441 DHX9Q08211 1270 aaKnown RBP9.09□□□□□ -0.95
SRRM1-213ENST00000485441 PPP1R26Q5T8A7 1209 aaPredicted RBP9.09□□□□□ -0.95
SRRM1-213ENST00000485441 ZNF784Q8NCA9 323 aaPredicted RBP9.09□□□□□ -0.95
SRRM1-213ENST00000485441 CCER1Q8TC90 406 aaPredicted RBP9.09□□□□□ -0.95
SRRM1-213ENST00000485441 PRIMPOLQ96LW4 560 aa9.09□□□□□ -0.95
SRRM1-213ENST00000485441 ZNF358Q9NW07 568 aa9.09□□□□□ -0.95
SRRM1-213ENST00000485441 CXXC1Q9P0U4 656 aaPredicted RBP9.09□□□□□ -0.95
SRRM1-213ENST00000485441 PSME1Q06323 249 aa9.08□□□□□ -0.96
SRRM1-213ENST00000485441 CCDC116Q8IYX3 515 aa9.08□□□□□ -0.96
SRRM1-213ENST00000485441 TSEN2Q8NCE0 465 aaKnown RBP9.08□□□□□ -0.96
SRRM1-213ENST00000485441 CYLDQ9NQC7 956 aa9.08□□□□□ -0.96
SRRM1-213ENST00000485441 PKD2L1Q9P0L9 805 aa9.08□□□□□ -0.96
SRRM1-213ENST00000485441 PRMT3O60678 531 aa9.07□□□□□ -0.96
SRRM1-213ENST00000485441 STAU1O95793 577 aaKnown RBP9.07□□□□□ -0.96
SRRM1-213ENST00000485441 RBM19Q9Y4C8 960 aaKnown RBP9.07□□□□□ -0.96
SRRM1-213ENST00000485441 LGR5O75473 907 aa9.06□□□□□ -0.96
SRRM1-213ENST00000485441 ZNF598Q86UK7 904 aaKnown RBP9.06□□□□□ -0.96
SRRM1-213ENST00000485441 EPHA4P54764 986 aa9.05□□□□□ -0.96
SRRM1-213ENST00000485441 GDF10P55107 478 aa9.05□□□□□ -0.96
SRRM1-213ENST00000485441 MYT1Q01538 1121 aa9.05□□□□□ -0.96
SRRM1-213ENST00000485441 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
SRRM1-213ENST00000485441 SLC4A9Q96Q91 983 aa9.05□□□□□ -0.96
SRRM1-213ENST00000485441 HINFPQ9BQA5 517 aa9.05□□□□□ -0.96
SRRM1-213ENST00000485441 MTMR7Q9Y216 660 aa9.05□□□□□ -0.96
SRRM1-213ENST00000485441 A0A0G2JS52 829 aa9.04□□□□□ -0.96
SRRM1-213ENST00000485441 INHAP05111 366 aa9.04□□□□□ -0.96
SRRM1-213ENST00000485441 SERPINB4P48594 390 aa9.04□□□□□ -0.96
SRRM1-213ENST00000485441 KLF16Q9BXK1 252 aaPredicted RBP9.04□□□□□ -0.96
SRRM1-213ENST00000485441 ETNK1Q9HBU6 452 aa9.04□□□□□ -0.96
SRRM1-213ENST00000485441 SOWAHDA6NJG2 315 aa9.03□□□□□ -0.96
SRRM1-213ENST00000485441 GNRH1P01148 92 aa9.03□□□□□ -0.96
SRRM1-213ENST00000485441 ZNF697Q5TEC3 545 aa9.03□□□□□ -0.96
SRRM1-213ENST00000485441 TRIM52Q96A61 297 aa9.03□□□□□ -0.96
SRRM1-213ENST00000485441 EMILIN1Q9Y6C2 1016 aa9.03□□□□□ -0.96
SRRM1-213ENST00000485441 C21orf2O43822 256 aa9.02□□□□□ -0.97
SRRM1-213ENST00000485441 FKBP5Q13451 457 aaPredicted RBP9.02□□□□□ -0.97
SRRM1-213ENST00000485441 TNS4Q8IZW8 715 aa9.02□□□□□ -0.97
SRRM1-213ENST00000485441 PURBQ96QR8 312 aaKnown RBP9.02□□□□□ -0.97
SRRM1-213ENST00000485441 HRH3Q9Y5N1 445 aa9.02□□□□□ -0.97
SRRM1-213ENST00000485441 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
SRRM1-213ENST00000485441 BACH1O14867 736 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 GDF9O60383 454 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 IGFBP4P22692 258 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 FOXK2Q01167 660 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 ECM1Q16610 540 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 CCDC27Q2M243 656 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 CAPN12Q6ZSI9 719 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 CYP2U1Q7Z449 544 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
SRRM1-213ENST00000485441 ESF1Q9H501 851 aaKnown RBP9.01□□□□□ -0.97
SRRM1-213ENST00000485441 ALDH1A1P00352 501 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms