RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 TRIM44Q96DX7 344 aaPredicted RBP18.58■□□□□ 0.56
TTC3-219ENST00000485402 HSP90AB1P08238 724 aaKnown RBP18.57■□□□□ 0.56
TTC3-219ENST00000485402 PIK3C2AO00443 1686 aa18.56■□□□□ 0.56
TTC3-219ENST00000485402 WDR63Q8IWG1 891 aa18.55■□□□□ 0.56
TTC3-219ENST00000485402 GRPEL1Q9HAV7 217 aa18.55■□□□□ 0.56
TTC3-219ENST00000485402 VSIG10Q8N0Z9 540 aa18.54■□□□□ 0.56
TTC3-219ENST00000485402 MST1RQ04912 1400 aa18.54■□□□□ 0.56
TTC3-219ENST00000485402 TRIM27P14373 513 aa18.54■□□□□ 0.56
TTC3-219ENST00000485402 NOB1Q9ULX3 412 aaKnown RBP18.54■□□□□ 0.56
TTC3-219ENST00000485402 FLT4P35916 1363 aa18.53■□□□□ 0.56
TTC3-219ENST00000485402 MRE11P49959 708 aa18.53■□□□□ 0.56
TTC3-219ENST00000485402 SSH1Q8WYL5 1049 aa18.53■□□□□ 0.56
TTC3-219ENST00000485402 GCP02774 474 aa18.53■□□□□ 0.56
TTC3-219ENST00000485402 HOXC9P31274 260 aa18.53■□□□□ 0.56
TTC3-219ENST00000485402 HSP90AA2PQ14568 343 aaPredicted RBP18.53■□□□□ 0.56
TTC3-219ENST00000485402 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
TTC3-219ENST00000485402 SBNO1A3KN83 1393 aa18.53■□□□□ 0.56
TTC3-219ENST00000485402 FSD2A1L4K1 749 aa18.51■□□□□ 0.55
TTC3-219ENST00000485402 THUMPD2Q9BTF0 503 aaKnown RBP18.51■□□□□ 0.55
TTC3-219ENST00000485402 SLAIN2Q9P270 581 aa18.51■□□□□ 0.55
TTC3-219ENST00000485402 IQSEC2Q5JU85 1478 aa18.51■□□□□ 0.55
TTC3-219ENST00000485402 ZC3H6P61129 1189 aaKnown RBP18.51■□□□□ 0.55
TTC3-219ENST00000485402 TMEM57Q8N5G2 664 aa18.51■□□□□ 0.55
TTC3-219ENST00000485402 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
TTC3-219ENST00000485402 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
TTC3-219ENST00000485402 KCNH5Q8NCM2 988 aa18.5■□□□□ 0.55
TTC3-219ENST00000485402 LRRC7Q96NW7 1537 aa18.5■□□□□ 0.55
TTC3-219ENST00000485402 EYA1Q99502 592 aa18.5■□□□□ 0.55
TTC3-219ENST00000485402 NPHP3Q7Z494 1330 aa18.5■□□□□ 0.55
TTC3-219ENST00000485402 GLIPR1L2Q4G1C9 344 aa18.5■□□□□ 0.55
TTC3-219ENST00000485402 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
TTC3-219ENST00000485402 NCOA3Q9Y6Q9 1424 aa18.5■□□□□ 0.55
TTC3-219ENST00000485402 DDX11L8A8MPP1 907 aa18.49■□□□□ 0.55
TTC3-219ENST00000485402 NFE2L2Q16236 605 aa18.49■□□□□ 0.55
TTC3-219ENST00000485402 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
TTC3-219ENST00000485402 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
TTC3-219ENST00000485402 TNPO1Q92973 898 aaKnown RBP18.49■□□□□ 0.55
TTC3-219ENST00000485402 ELL2O00472 640 aaPredicted RBP18.49■□□□□ 0.55
TTC3-219ENST00000485402 NCLP19338 710 aaKnown RBP18.49■□□□□ 0.55
TTC3-219ENST00000485402 CLCN1P35523 988 aa18.49■□□□□ 0.55
TTC3-219ENST00000485402 ANKRD45Q5TZF3 282 aa18.49■□□□□ 0.55
TTC3-219ENST00000485402 USHBP1Q8N6Y0 703 aa18.49■□□□□ 0.55
TTC3-219ENST00000485402 ESPNB1AK53 854 aa18.48■□□□□ 0.55
TTC3-219ENST00000485402 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
TTC3-219ENST00000485402 PEAK1Q9H792 1746 aa18.48■□□□□ 0.55
TTC3-219ENST00000485402 DCCP43146 1447 aa18.48■□□□□ 0.55
TTC3-219ENST00000485402 AAMPQ13685 434 aa18.48■□□□□ 0.55
TTC3-219ENST00000485402 DCTN1Q14203 1278 aa18.48■□□□□ 0.55
TTC3-219ENST00000485402 FAM83GA6ND36 823 aa18.47■□□□□ 0.55
TTC3-219ENST00000485402 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
TTC3-219ENST00000485402 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
TTC3-219ENST00000485402 GAS2L3Q86XJ1 694 aa18.47■□□□□ 0.55
TTC3-219ENST00000485402 IP6K1Q92551 441 aa18.45■□□□□ 0.54
TTC3-219ENST00000485402 GBP4Q96PP9 640 aa18.45■□□□□ 0.54
TTC3-219ENST00000485402 ERBB4Q15303 1308 aa18.44■□□□□ 0.54
TTC3-219ENST00000485402 LRRC59Q96AG4 307 aaKnown RBP18.43■□□□□ 0.54
TTC3-219ENST00000485402 ARHGEF25Q86VW2 580 aa18.43■□□□□ 0.54
TTC3-219ENST00000485402 HAP1P54257 671 aaPredicted RBP18.42■□□□□ 0.54
TTC3-219ENST00000485402 CD2BP2O95400 341 aaKnown RBP18.41■□□□□ 0.54
TTC3-219ENST00000485402 XIRP1Q702N8 1843 aaKnown RBP18.41■□□□□ 0.54
TTC3-219ENST00000485402 MCM10Q7L590 875 aa18.41■□□□□ 0.54
TTC3-219ENST00000485402 CHRNA2Q15822 529 aa18.41■□□□□ 0.54
TTC3-219ENST00000485402 AXIN2Q9Y2T1 843 aa18.41■□□□□ 0.54
TTC3-219ENST00000485402 HDAC1Q13547 482 aaPredicted RBP18.4■□□□□ 0.54
TTC3-219ENST00000485402 NBPF6Q5VWK0 638 aa18.4■□□□□ 0.54
TTC3-219ENST00000485402 NBPF4Q96M43 638 aa18.4■□□□□ 0.54
TTC3-219ENST00000485402 IGSF1Q8N6C5 1336 aa18.4■□□□□ 0.54
TTC3-219ENST00000485402 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
TTC3-219ENST00000485402 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
TTC3-219ENST00000485402 CHD1LQ86WJ1 897 aa18.4■□□□□ 0.54
TTC3-219ENST00000485402 KIF1AQ12756 1690 aa18.4■□□□□ 0.54
TTC3-219ENST00000485402 MARF1Q9Y4F3 1742 aaKnown RBP18.4■□□□□ 0.54
TTC3-219ENST00000485402 DDX49Q9Y6V7 483 aaKnown RBP18.4■□□□□ 0.54
TTC3-219ENST00000485402 IPO8O15397 1037 aaKnown RBP18.39■□□□□ 0.53
TTC3-219ENST00000485402 SSFA2P28290 1259 aa18.39■□□□□ 0.53
TTC3-219ENST00000485402 ANP32BQ92688 251 aaKnown RBP18.39■□□□□ 0.53
TTC3-219ENST00000485402 APBB1O00213 710 aa18.39■□□□□ 0.53
TTC3-219ENST00000485402 LMOD3Q0VAK6 560 aa18.39■□□□□ 0.53
TTC3-219ENST00000485402 SMC5Q8IY18 1101 aa18.39■□□□□ 0.53
TTC3-219ENST00000485402 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
TTC3-219ENST00000485402 ARHGEF10O15013 1369 aa18.39■□□□□ 0.53
TTC3-219ENST00000485402 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
TTC3-219ENST00000485402 KIF24Q5T7B8 1368 aa18.38■□□□□ 0.53
TTC3-219ENST00000485402 ZBTB40Q9NUA8 1239 aa18.38■□□□□ 0.53
TTC3-219ENST00000485402 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
TTC3-219ENST00000485402 NFAT5O94916 1531 aa18.36■□□□□ 0.53
TTC3-219ENST00000485402 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
TTC3-219ENST00000485402 CALD1Q05682 793 aaKnown RBP18.36■□□□□ 0.53
TTC3-219ENST00000485402 PKNOX2Q96KN3 472 aa18.36■□□□□ 0.53
TTC3-219ENST00000485402 ZMYND15Q9H091 742 aa18.36■□□□□ 0.53
TTC3-219ENST00000485402 LTN1O94822 1766 aa18.36■□□□□ 0.53
TTC3-219ENST00000485402 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
TTC3-219ENST00000485402 ARID3AQ99856 593 aa18.36■□□□□ 0.53
TTC3-219ENST00000485402 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
TTC3-219ENST00000485402 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
TTC3-219ENST00000485402 NUCB1Q02818 461 aa18.35■□□□□ 0.53
TTC3-219ENST00000485402 IL16Q14005 1332 aa18.35■□□□□ 0.53
TTC3-219ENST00000485402 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
TTC3-219ENST00000485402 GNAI1P63096 354 aa18.34■□□□□ 0.53
TTC3-219ENST00000485402 FOXD4L5Q5VV16 416 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms