RNA–Protein interactions for RNA: ENST00000485194.1

ATP13A3-208, Transcript of ATPase 13A3, humanhuman

TSL 5

Gene ATP13A3, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-208ENST00000485194 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
ATP13A3-208ENST00000485194 DNAAF2Q9NVR5 837 aaKnown RBP9.31□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L10C9JJH3 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L11C9JVI0 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L21D6R901 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L18D6R9N7 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L22D6RA61 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L17D6RBQ6 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L19D6RCP7 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L20D6RJB6 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 ATG7O95352 703 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 USP17L24Q0WX57 530 aa9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 ZNF784Q8NCA9 323 aaPredicted RBP9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 ZNF594Q96JF6 807 aaPredicted RBP9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 NOVA2Q9UNW9 492 aaKnown RBP9.3□□□□□ -0.92
ATP13A3-208ENST00000485194 PRR20EP86478 221 aa9.29□□□□□ -0.92
ATP13A3-208ENST00000485194 PRR20CP86479 221 aa9.29□□□□□ -0.92
ATP13A3-208ENST00000485194 PRR20DP86480 221 aa9.29□□□□□ -0.92
ATP13A3-208ENST00000485194 PRR20BP86481 221 aa9.29□□□□□ -0.92
ATP13A3-208ENST00000485194 PRR20AP86496 221 aa9.29□□□□□ -0.92
ATP13A3-208ENST00000485194 ZNF775Q96BV0 537 aaPredicted RBP9.29□□□□□ -0.92
ATP13A3-208ENST00000485194 PDZRN3Q9UPQ7 1066 aa9.29□□□□□ -0.92
ATP13A3-208ENST00000485194 FAM196BA6NMK8 535 aa9.28□□□□□ -0.92
ATP13A3-208ENST00000485194 SCTRP47872 440 aa9.28□□□□□ -0.92
ATP13A3-208ENST00000485194 CRTC2Q53ET0 693 aaPredicted RBP9.28□□□□□ -0.92
ATP13A3-208ENST00000485194 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
ATP13A3-208ENST00000485194 WDR4P57081 412 aaKnown RBP9.27□□□□□ -0.93
ATP13A3-208ENST00000485194 ERVK-9P63128 1117 aa9.27□□□□□ -0.93
ATP13A3-208ENST00000485194 LARGE2Q8N3Y3 721 aa9.27□□□□□ -0.93
ATP13A3-208ENST00000485194 FAM200AQ8TCP9 573 aa9.27□□□□□ -0.93
ATP13A3-208ENST00000485194 ZIC2O95409 532 aaPredicted RBP9.26□□□□□ -0.93
ATP13A3-208ENST00000485194 CLDN10P78369 228 aa9.26□□□□□ -0.93
ATP13A3-208ENST00000485194 PTK7Q13308 1070 aa9.26□□□□□ -0.93
ATP13A3-208ENST00000485194 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
ATP13A3-208ENST00000485194 TRIM67Q6ZTA4 783 aa9.26□□□□□ -0.93
ATP13A3-208ENST00000485194 CYP2U1Q7Z449 544 aa9.26□□□□□ -0.93
ATP13A3-208ENST00000485194 ANKMY2Q8IV38 441 aa9.26□□□□□ -0.93
ATP13A3-208ENST00000485194 TPCN2Q8NHX9 752 aa9.26□□□□□ -0.93
ATP13A3-208ENST00000485194 SMPD1P17405 629 aa9.25□□□□□ -0.93
ATP13A3-208ENST00000485194 DPYDQ12882 1025 aa9.25□□□□□ -0.93
ATP13A3-208ENST00000485194 ELOAQ14241 798 aaKnown RBP9.24□□□□□ -0.93
ATP13A3-208ENST00000485194 OSBPL3Q9H4L5 887 aa9.24□□□□□ -0.93
ATP13A3-208ENST00000485194 USTQ9Y2C2 406 aa9.24□□□□□ -0.93
ATP13A3-208ENST00000485194 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
ATP13A3-208ENST00000485194 FAM187AA6NFU0 413 aa9.23□□□□□ -0.93
ATP13A3-208ENST00000485194 SEC13P55735 322 aa9.23□□□□□ -0.93
ATP13A3-208ENST00000485194 STK32AQ8WU08 396 aa9.23□□□□□ -0.93
ATP13A3-208ENST00000485194 HPS1Q92902 700 aa9.23□□□□□ -0.93
ATP13A3-208ENST00000485194 ITPKCQ96DU7 683 aa9.23□□□□□ -0.93
ATP13A3-208ENST00000485194 KIAA1024Q9UPX6 916 aa9.23□□□□□ -0.93
ATP13A3-208ENST00000485194 LILRA1O75019 489 aa9.22□□□□□ -0.93
ATP13A3-208ENST00000485194 ADD1P35611 737 aaKnown RBP9.22□□□□□ -0.93
ATP13A3-208ENST00000485194 CBLBQ13191 982 aa9.22□□□□□ -0.93
ATP13A3-208ENST00000485194 ZFAND3Q9H8U3 227 aa9.22□□□□□ -0.93
ATP13A3-208ENST00000485194 SFI1A8K8P3 1242 aa9.21□□□□□ -0.94
ATP13A3-208ENST00000485194 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.94
ATP13A3-208ENST00000485194 ESCO1Q5FWF5 840 aa9.21□□□□□ -0.94
ATP13A3-208ENST00000485194 TMEM164Q5U3C3 297 aa9.21□□□□□ -0.94
ATP13A3-208ENST00000485194 SIX5Q8N196 739 aa9.21□□□□□ -0.94
ATP13A3-208ENST00000485194 HINFPQ9BQA5 517 aa9.21□□□□□ -0.94
ATP13A3-208ENST00000485194 ZMIZ1Q9ULJ6 1067 aa9.21□□□□□ -0.94
ATP13A3-208ENST00000485194 CAPN5O15484 640 aaPredicted RBP9.2□□□□□ -0.94
ATP13A3-208ENST00000485194 ADH1AP07327 375 aa9.2□□□□□ -0.94
ATP13A3-208ENST00000485194 TIMP2P16035 220 aa9.2□□□□□ -0.94
ATP13A3-208ENST00000485194 CARNS1A5YM72 827 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 BACH1O14867 736 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 UPP2O95045 317 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 GNRH1P01148 92 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 GDF10P55107 478 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 RELBQ01201 579 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 TRAIPQ9BWF2 469 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 RAB6BQ9NRW1 208 aa9.19□□□□□ -0.94
ATP13A3-208ENST00000485194 PKDCCQ504Y2 493 aa9.18□□□□□ -0.94
ATP13A3-208ENST00000485194 AGBL1Q96MI9 1066 aa9.18□□□□□ -0.94
ATP13A3-208ENST00000485194 SERTAD1Q9UHV2 236 aa9.18□□□□□ -0.94
ATP13A3-208ENST00000485194 MEN1O00255 615 aa9.17□□□□□ -0.94
ATP13A3-208ENST00000485194 STAU1O95793 577 aaKnown RBP9.17□□□□□ -0.94
ATP13A3-208ENST00000485194 NLRP3Q96P20 1036 aa9.17□□□□□ -0.94
ATP13A3-208ENST00000485194 KLF16Q9BXK1 252 aaPredicted RBP9.17□□□□□ -0.94
ATP13A3-208ENST00000485194 INHAP05111 366 aa9.16□□□□□ -0.94
ATP13A3-208ENST00000485194 B4GALNT3Q6L9W6 998 aa9.16□□□□□ -0.94
ATP13A3-208ENST00000485194 Q6ZVU0 165 aa9.16□□□□□ -0.94
ATP13A3-208ENST00000485194 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
ATP13A3-208ENST00000485194 ZNF395Q9H8N7 513 aaPredicted RBP9.16□□□□□ -0.94
ATP13A3-208ENST00000485194 ETNK1Q9HBU6 452 aa9.16□□□□□ -0.94
ATP13A3-208ENST00000485194 ZNF358Q9NW07 568 aa9.16□□□□□ -0.94
ATP13A3-208ENST00000485194 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
ATP13A3-208ENST00000485194 TMEM88BA6NKF7 163 aa9.15□□□□□ -0.94
ATP13A3-208ENST00000485194 PTGIRP43119 386 aa9.15□□□□□ -0.94
ATP13A3-208ENST00000485194 SCNN1DP51172 638 aa9.15□□□□□ -0.94
ATP13A3-208ENST00000485194 SWI5Q1ZZU3 235 aa9.15□□□□□ -0.94
ATP13A3-208ENST00000485194 TSEN34Q9BSV6 310 aaKnown RBP9.15□□□□□ -0.94
ATP13A3-208ENST00000485194 TMEM229AB2RXF0 380 aa9.14□□□□□ -0.95
ATP13A3-208ENST00000485194 LGR5O75473 907 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms