RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 GAS6Q14393 721 aa7.96□□□□□ -1.14
SPTA1-206ENST00000484520 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.14
SPTA1-206ENST00000484520 KDM4CQ9H3R0 1056 aa7.96□□□□□ -1.14
SPTA1-206ENST00000484520 RHOQP17081 205 aa7.95□□□□□ -1.14
SPTA1-206ENST00000484520 KANK3Q6NY19 840 aa7.95□□□□□ -1.14
SPTA1-206ENST00000484520 SCARF2Q96GP6 870 aaPredicted RBP7.95□□□□□ -1.14
SPTA1-206ENST00000484520 DDRGK1Q96HY6 314 aa7.95□□□□□ -1.14
SPTA1-206ENST00000484520 CYLDQ9NQC7 956 aa7.95□□□□□ -1.14
SPTA1-206ENST00000484520 CELA2BP08218 269 aaPredicted RBP7.94□□□□□ -1.14
SPTA1-206ENST00000484520 MAP3K10Q02779 954 aa7.94□□□□□ -1.14
SPTA1-206ENST00000484520 RNF144AP50876 292 aaPredicted RBP7.93□□□□□ -1.14
SPTA1-206ENST00000484520 IGHA1P01876 353 aa7.92□□□□□ -1.14
SPTA1-206ENST00000484520 SEPT12Q8IYM1 358 aa7.92□□□□□ -1.14
SPTA1-206ENST00000484520 GPR25O00155 361 aa7.91□□□□□ -1.14
SPTA1-206ENST00000484520 RFC5P40937 340 aa7.91□□□□□ -1.14
SPTA1-206ENST00000484520 ZNF837Q96EG3 531 aaPredicted RBP7.91□□□□□ -1.14
SPTA1-206ENST00000484520 ATP5J2-PTCD1G3V325 749 aa7.9□□□□□ -1.14
SPTA1-206ENST00000484520 MEN1O00255 615 aa7.9□□□□□ -1.14
SPTA1-206ENST00000484520 GIGYF1O75420 1035 aaPredicted RBP7.9□□□□□ -1.14
SPTA1-206ENST00000484520 FOXK2Q01167 660 aa7.9□□□□□ -1.14
SPTA1-206ENST00000484520 TRIM22Q8IYM9 498 aa7.9□□□□□ -1.14
SPTA1-206ENST00000484520 ENAMQ9NRM1 1142 aa7.9□□□□□ -1.14
SPTA1-206ENST00000484520 NACADO15069 1562 aa7.89□□□□□ -1.15
SPTA1-206ENST00000484520 DBN1Q16643 649 aa7.89□□□□□ -1.15
SPTA1-206ENST00000484520 RIPOR1Q6ZS17 1223 aa7.89□□□□□ -1.15
SPTA1-206ENST00000484520 TRIM34Q9BYJ4 488 aa7.89□□□□□ -1.15
SPTA1-206ENST00000484520 MBIPQ9NS73 344 aa7.89□□□□□ -1.15
SPTA1-206ENST00000484520 IGF1RP08069 1367 aa7.88□□□□□ -1.15
SPTA1-206ENST00000484520 FOXR1Q6PIV2 292 aa7.88□□□□□ -1.15
SPTA1-206ENST00000484520 TRIM52Q96A61 297 aa7.88□□□□□ -1.15
SPTA1-206ENST00000484520 GMCL1Q96IK5 515 aa7.88□□□□□ -1.15
SPTA1-206ENST00000484520 PCDHB9Q9Y5E1 797 aa7.88□□□□□ -1.15
SPTA1-206ENST00000484520 CNTNAP5Q8WYK1 1306 aa7.87□□□□□ -1.15
SPTA1-206ENST00000484520 A0A1W2PRU2 124 aa7.87□□□□□ -1.15
SPTA1-206ENST00000484520 GPC1P35052 558 aa7.87□□□□□ -1.15
SPTA1-206ENST00000484520 ZBBXA8MT70 800 aa7.86□□□□□ -1.15
SPTA1-206ENST00000484520 POU4F2Q12837 409 aa7.86□□□□□ -1.15
SPTA1-206ENST00000484520 GTPBP3Q969Y2 492 aaKnown RBP7.86□□□□□ -1.15
SPTA1-206ENST00000484520 GAS2L1Q99501 681 aaPredicted RBP7.86□□□□□ -1.15
SPTA1-206ENST00000484520 DYRK1BQ9Y463 629 aa7.86□□□□□ -1.15
SPTA1-206ENST00000484520 BCRP11274 1271 aa7.85□□□□□ -1.15
SPTA1-206ENST00000484520 SLC27A3Q5K4L6 730 aa7.85□□□□□ -1.15
SPTA1-206ENST00000484520 NEDD1Q8NHV4 660 aa7.85□□□□□ -1.15
SPTA1-206ENST00000484520 PHF20L1A8MW92 1017 aa7.84□□□□□ -1.15
SPTA1-206ENST00000484520 H7C1W4 665 aa7.84□□□□□ -1.15
SPTA1-206ENST00000484520 FBXO45P0C2W1 286 aa7.84□□□□□ -1.15
SPTA1-206ENST00000484520 ERVK-9P63128 1117 aa7.84□□□□□ -1.15
SPTA1-206ENST00000484520 CC2D2BQ6DHV5 1058 aa7.84□□□□□ -1.15
SPTA1-206ENST00000484520 ACDQ96AP0 544 aa7.84□□□□□ -1.15
SPTA1-206ENST00000484520 NLRP3Q96P20 1036 aa7.84□□□□□ -1.15
SPTA1-206ENST00000484520 PLA2G4EQ3MJ16 856 aa7.83□□□□□ -1.16
SPTA1-206ENST00000484520 BEND7Q8N7W2 519 aaPredicted RBP7.83□□□□□ -1.16
SPTA1-206ENST00000484520 DCAF5Q96JK2 942 aa7.83□□□□□ -1.16
SPTA1-206ENST00000484520 TRERF1Q96PN7 1200 aa7.83□□□□□ -1.16
SPTA1-206ENST00000484520 TMEM259Q4ZIN3 620 aa7.82□□□□□ -1.16
SPTA1-206ENST00000484520 NBPF10Q6P3W6 841 aaKnown RBP7.82□□□□□ -1.16
SPTA1-206ENST00000484520 PODNQ7Z5L7 613 aa7.82□□□□□ -1.16
SPTA1-206ENST00000484520 NBPF15Q8N660 670 aa7.82□□□□□ -1.16
SPTA1-206ENST00000484520 GJD4Q96KN9 370 aaPredicted RBP7.82□□□□□ -1.16
SPTA1-206ENST00000484520 GRIP2Q9C0E4 1043 aa7.82□□□□□ -1.16
SPTA1-206ENST00000484520 MSTNO14793 375 aa7.81□□□□□ -1.16
SPTA1-206ENST00000484520 MX2P20592 715 aa7.81□□□□□ -1.16
SPTA1-206ENST00000484520 SCTRP47872 440 aa7.81□□□□□ -1.16
SPTA1-206ENST00000484520 CLN3Q13286 438 aa7.81□□□□□ -1.16
SPTA1-206ENST00000484520 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
SPTA1-206ENST00000484520 CCDC125Q86Z20 511 aa7.81□□□□□ -1.16
SPTA1-206ENST00000484520 PCMTD1Q96MG8 357 aaPredicted RBP7.81□□□□□ -1.16
SPTA1-206ENST00000484520 RB1CC1Q8TDY2 1594 aa7.8□□□□□ -1.16
SPTA1-206ENST00000484520 ITGB2P05107 769 aa7.8□□□□□ -1.16
SPTA1-206ENST00000484520 CYP2U1Q7Z449 544 aa7.8□□□□□ -1.16
SPTA1-206ENST00000484520 ARHGEF10LQ9HCE6 1279 aa7.8□□□□□ -1.16
SPTA1-206ENST00000484520 TIMMDC1Q9NPL8 285 aa7.8□□□□□ -1.16
SPTA1-206ENST00000484520 SPATA31C2B4DYI2 1134 aa7.79□□□□□ -1.16
SPTA1-206ENST00000484520 SPOCK3Q9BQ16 436 aa7.79□□□□□ -1.16
SPTA1-206ENST00000484520 NUCKS1Q9H1E3 243 aaKnown RBP7.79□□□□□ -1.16
SPTA1-206ENST00000484520 OSBPL3Q9H4L5 887 aa7.79□□□□□ -1.16
SPTA1-206ENST00000484520 PCDHB11Q9Y5F2 797 aa7.79□□□□□ -1.16
SPTA1-206ENST00000484520 WASLO00401 505 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-206ENST00000484520 F11P03951 625 aa7.78□□□□□ -1.16
SPTA1-206ENST00000484520 WDR44Q5JSH3 913 aa7.78□□□□□ -1.16
SPTA1-206ENST00000484520 TAS1R3Q7RTX0 852 aa7.78□□□□□ -1.16
SPTA1-206ENST00000484520 GOPCQ9HD26 462 aa7.78□□□□□ -1.16
SPTA1-206ENST00000484520 NSFL1CQ9UNZ2 370 aaKnown RBP7.78□□□□□ -1.16
SPTA1-206ENST00000484520 OIP5O43482 229 aa7.77□□□□□ -1.17
SPTA1-206ENST00000484520 TRAK2O60296 914 aa7.77□□□□□ -1.17
SPTA1-206ENST00000484520 NR1H3Q13133 447 aa7.77□□□□□ -1.17
SPTA1-206ENST00000484520 RAB6BQ9NRW1 208 aa7.77□□□□□ -1.17
SPTA1-206ENST00000484520 LRRC4BQ9NT99 713 aa7.77□□□□□ -1.17
SPTA1-206ENST00000484520 ADAM23O75077 832 aa7.76□□□□□ -1.17
SPTA1-206ENST00000484520 MCCD1P59942 119 aaPredicted RBP7.76□□□□□ -1.17
SPTA1-206ENST00000484520 ESF1Q9H501 851 aaKnown RBP7.76□□□□□ -1.17
SPTA1-206ENST00000484520 GPAMQ9HCL2 828 aa7.76□□□□□ -1.17
SPTA1-206ENST00000484520 PROCP04070 461 aa7.75□□□□□ -1.17
SPTA1-206ENST00000484520 THBS1P07996 1170 aa7.75□□□□□ -1.17
SPTA1-206ENST00000484520 OXCT2Q9BYC2 517 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-206ENST00000484520 PHKA2P46019 1235 aa7.74□□□□□ -1.17
SPTA1-206ENST00000484520 MAP2K3P46734 347 aa7.74□□□□□ -1.17
SPTA1-206ENST00000484520 SNRPNP63162 240 aaKnown RBP7.74□□□□□ -1.17
SPTA1-206ENST00000484520 GALNT6Q8NCL4 622 aa7.74□□□□□ -1.17
SPTA1-206ENST00000484520 CNKSR1Q969H4 720 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms