RNA–Protein interactions for RNA: ENST00000484245.1

GADD45A-204, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best)

Gene GADD45A, Length 688 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-204ENST00000484245 SHANK3Q9BYB0 1731 aa29.81■■■□□ 2.36
GADD45A-204ENST00000484245 DOT1LQ8TEK3 1739 aa29.8■■■□□ 2.36
GADD45A-204ENST00000484245 FYB1O15117 783 aa29.8■■■□□ 2.36
GADD45A-204ENST00000484245 ZNF827Q17R98 1081 aa29.8■■■□□ 2.36
GADD45A-204ENST00000484245 SGIP1Q9BQI5 828 aa29.8■■■□□ 2.36
GADD45A-204ENST00000484245 FHDC1Q9C0D6 1143 aaPredicted RBP29.78■■■□□ 2.36
GADD45A-204ENST00000484245 RTL1A6NKG5 1358 aa29.77■■■□□ 2.36
GADD45A-204ENST00000484245 SYT17Q9BSW7 474 aa29.77■■■□□ 2.36
GADD45A-204ENST00000484245 GGNBP2Q9H3C7 697 aa29.77■■■□□ 2.36
GADD45A-204ENST00000484245 QSER1Q2KHR3 1735 aa29.76■■■□□ 2.36
GADD45A-204ENST00000484245 RRS1Q15050 365 aaKnown RBP29.76■■■□□ 2.35
GADD45A-204ENST00000484245 ZCRB1Q8TBF4 217 aaKnown RBP29.76■■■□□ 2.35
GADD45A-204ENST00000484245 MEGF6O75095 1541 aa29.76■■■□□ 2.35
GADD45A-204ENST00000484245 PRIM1P49642 420 aaKnown RBP29.75■■■□□ 2.35
GADD45A-204ENST00000484245 SLC27A3Q5K4L6 730 aa29.75■■■□□ 2.35
GADD45A-204ENST00000484245 SYTL4Q96C24 671 aaPredicted RBP29.75■■■□□ 2.35
GADD45A-204ENST00000484245 AKT1S1Q96B36 256 aa29.74■■■□□ 2.35
GADD45A-204ENST00000484245 PANK3Q9H999 370 aa29.74■■■□□ 2.35
GADD45A-204ENST00000484245 LY75O60449 1722 aa29.74■■■□□ 2.35
GADD45A-204ENST00000484245 WASHC2AQ641Q2 1341 aa29.73■■■□□ 2.35
GADD45A-204ENST00000484245 MAP2P11137 1827 aaKnown RBP29.73■■■□□ 2.35
GADD45A-204ENST00000484245 TUBGCP6Q96RT7 1819 aa29.73■■■□□ 2.35
GADD45A-204ENST00000484245 NBPF6Q5VWK0 638 aa29.72■■■□□ 2.35
GADD45A-204ENST00000484245 NBPF4Q96M43 638 aa29.72■■■□□ 2.35
GADD45A-204ENST00000484245 ARXQ96QS3 562 aa29.72■■■□□ 2.35
GADD45A-204ENST00000484245 ZEB1P37275 1124 aaPredicted RBP29.71■■■□□ 2.35
GADD45A-204ENST00000484245 CGNL1Q0VF96 1302 aa29.71■■■□□ 2.35
GADD45A-204ENST00000484245 NSD2O96028 1365 aa29.7■■■□□ 2.35
GADD45A-204ENST00000484245 KCNQ4P56696 695 aa29.69■■■□□ 2.34
GADD45A-204ENST00000484245 USHBP1Q8N6Y0 703 aa29.69■■■□□ 2.34
GADD45A-204ENST00000484245 SMG6Q86US8 1419 aaKnown RBP29.69■■■□□ 2.34
GADD45A-204ENST00000484245 CHD4Q14839 1912 aa29.67■■■□□ 2.34
GADD45A-204ENST00000484245 UTRNP46939 3433 aa29.67■■■□□ 2.34
GADD45A-204ENST00000484245 COL24A1Q17RW2 1714 aa29.66■■■□□ 2.34
GADD45A-204ENST00000484245 SLC16A10Q8TF71 515 aa29.66■■■□□ 2.34
GADD45A-204ENST00000484245 PNPLA7Q6ZV29 1317 aa29.66■■■□□ 2.34
GADD45A-204ENST00000484245 HSP90AB2PQ58FF8 381 aa29.65■■■□□ 2.34
GADD45A-204ENST00000484245 RAPGEF4Q8WZA2 1011 aa29.65■■■□□ 2.34
GADD45A-204ENST00000484245 INSRP06213 1382 aa29.64■■■□□ 2.34
GADD45A-204ENST00000484245 MAP3K5Q99683 1374 aa29.64■■■□□ 2.34
GADD45A-204ENST00000484245 TFCP2L1Q9NZI6 479 aa29.64■■■□□ 2.34
GADD45A-204ENST00000484245 FLT4P35916 1363 aa29.63■■■□□ 2.33
GADD45A-204ENST00000484245 TATP17735 454 aaPredicted RBP29.62■■■□□ 2.33
GADD45A-204ENST00000484245 CCNL1Q9UK58 526 aaPredicted RBP29.61■■■□□ 2.33
GADD45A-204ENST00000484245 KIF24Q5T7B8 1368 aa29.61■■■□□ 2.33
GADD45A-204ENST00000484245 PER1O15534 1290 aaPredicted RBP29.59■■■□□ 2.33
GADD45A-204ENST00000484245 POLD1P28340 1107 aa29.58■■■□□ 2.33
GADD45A-204ENST00000484245 KNSTRNQ9Y448 316 aa29.58■■■□□ 2.33
GADD45A-204ENST00000484245 PCDH11XQ9BZA7 1347 aa29.56■■■□□ 2.32
GADD45A-204ENST00000484245 PCDH11YQ9BZA8 1340 aa29.56■■■□□ 2.32
GADD45A-204ENST00000484245 KLHL34Q8N239 644 aa29.55■■■□□ 2.32
GADD45A-204ENST00000484245 EMILIN1Q9Y6C2 1016 aa29.55■■■□□ 2.32
GADD45A-204ENST00000484245 ITGB4P16144 1822 aa29.55■■■□□ 2.32
GADD45A-204ENST00000484245 AMER1Q5JTC6 1135 aaPredicted RBP29.54■■■□□ 2.32
GADD45A-204ENST00000484245 ZNF784Q8NCA9 323 aaPredicted RBP29.54■■■□□ 2.32
GADD45A-204ENST00000484245 C5P01031 1676 aa29.53■■■□□ 2.32
GADD45A-204ENST00000484245 TAF1LQ8IZX4 1826 aa29.52■■■□□ 2.32
GADD45A-204ENST00000484245 PKD1L3Q7Z443 1732 aa29.52■■■□□ 2.32
GADD45A-204ENST00000484245 TOGARAM1Q9Y4F4 1720 aa29.51■■■□□ 2.31
GADD45A-204ENST00000484245 CYP27B1O15528 508 aa29.5■■■□□ 2.31
GADD45A-204ENST00000484245 MSH5O43196 834 aa29.5■■■□□ 2.31
GADD45A-204ENST00000484245 GPR162Q16538 588 aa29.5■■■□□ 2.31
GADD45A-204ENST00000484245 COL23A1Q86Y22 540 aaPredicted RBP29.5■■■□□ 2.31
GADD45A-204ENST00000484245 MPRIPQ6WCQ1 1025 aa29.49■■■□□ 2.31
GADD45A-204ENST00000484245 NPC1L1Q9UHC9 1359 aa29.49■■■□□ 2.31
GADD45A-204ENST00000484245 PPM1GO15355 546 aaPredicted RBP29.48■■■□□ 2.31
GADD45A-204ENST00000484245 PALLDQ8WX93 1383 aa29.47■■■□□ 2.31
GADD45A-204ENST00000484245 NCAPD2Q15021 1401 aa29.46■■■□□ 2.31
GADD45A-204ENST00000484245 POLKQ9UBT6 870 aa29.45■■■□□ 2.31
GADD45A-204ENST00000484245 MORC1Q86VD1 984 aa29.44■■■□□ 2.3
GADD45A-204ENST00000484245 NLGN2Q8NFZ4 835 aa29.44■■■□□ 2.3
GADD45A-204ENST00000484245 GOLGB1Q14789 3259 aaKnown RBP29.43■■■□□ 2.3
GADD45A-204ENST00000484245 PELP1Q8IZL8 1130 aaKnown RBP29.43■■■□□ 2.3
GADD45A-204ENST00000484245 HMGB2P26583 209 aaKnown RBP29.42■■■□□ 2.3
GADD45A-204ENST00000484245 MSL1Q68DK7 614 aa29.41■■■□□ 2.3
GADD45A-204ENST00000484245 SPG7Q9UQ90 795 aa29.41■■■□□ 2.3
GADD45A-204ENST00000484245 C4BP0C0L5 1744 aa29.4■■■□□ 2.3
GADD45A-204ENST00000484245 TNNT2P45379 298 aaPredicted RBP29.4■■■□□ 2.3
GADD45A-204ENST00000484245 SMARCC1Q92922 1105 aaPredicted RBP29.4■■■□□ 2.3
GADD45A-204ENST00000484245 EYA1Q99502 592 aa29.4■■■□□ 2.3
GADD45A-204ENST00000484245 NKX1-1Q15270 411 aaPredicted RBP29.39■■■□□ 2.3
GADD45A-204ENST00000484245 FLAD1Q8NFF5 587 aa29.39■■■□□ 2.3
GADD45A-204ENST00000484245 PIGBQ92521 554 aa29.39■■■□□ 2.3
GADD45A-204ENST00000484245 UBR3Q6ZT12 1888 aa29.37■■■□□ 2.29
GADD45A-204ENST00000484245 CC2D1BQ5T0F9 858 aaKnown RBP29.35■■■□□ 2.29
GADD45A-204ENST00000484245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.35■■■□□ 2.29
GADD45A-204ENST00000484245 AK7Q96M32 723 aa29.33■■■□□ 2.29
GADD45A-204ENST00000484245 YBX3P16989 372 aaKnown RBP eCLIP29.31■■■□□ 2.28
GADD45A-204ENST00000484245 AMIGO3Q86WK7 504 aa29.31■■■□□ 2.28
GADD45A-204ENST00000484245 EIF4A2Q14240 407 aaKnown RBP29.3■■■□□ 2.28
GADD45A-204ENST00000484245 IFNL2Q8IZJ0 200 aa29.3■■■□□ 2.28
GADD45A-204ENST00000484245 TMOD3Q9NYL9 352 aa29.3■■■□□ 2.28
GADD45A-204ENST00000484245 LOC102724428A0A0B4J2F2 783 aa29.29■■■□□ 2.28
GADD45A-204ENST00000484245 GRIN3BO60391 1043 aa29.29■■■□□ 2.28
GADD45A-204ENST00000484245 PHKG2P15735 406 aa29.29■■■□□ 2.28
GADD45A-204ENST00000484245 SIK1P57059 783 aa29.29■■■□□ 2.28
GADD45A-204ENST00000484245 PHF14O94880 888 aa29.28■■■□□ 2.28
GADD45A-204ENST00000484245 SMIM5Q71RC9 77 aa29.28■■■□□ 2.28
GADD45A-204ENST00000484245 CD2APQ9Y5K6 639 aa29.28■■■□□ 2.28
GADD45A-204ENST00000484245 ASAP1Q9ULH1 1129 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms