RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 RNFT1Q5M7Z0 435 aa4.78□□□□□ -1.64
ITGB1-213ENST00000484088 SEPT12Q8IYM1 358 aa4.78□□□□□ -1.64
ITGB1-213ENST00000484088 CLUAP1Q96AJ1 413 aa4.78□□□□□ -1.64
ITGB1-213ENST00000484088 GDPD2Q9HCC8 539 aa4.78□□□□□ -1.64
ITGB1-213ENST00000484088 PGPEP1Q9NXJ5 209 aa4.78□□□□□ -1.64
ITGB1-213ENST00000484088 CEP126Q9P2H0 1117 aa4.78□□□□□ -1.64
ITGB1-213ENST00000484088 A6NJR5 290 aa4.77□□□□□ -1.65
ITGB1-213ENST00000484088 MAN1A2O60476 641 aa4.77□□□□□ -1.65
ITGB1-213ENST00000484088 ADAMTS19Q8TE59 1207 aa4.77□□□□□ -1.65
ITGB1-213ENST00000484088 COG6Q9Y2V7 657 aa4.77□□□□□ -1.65
ITGB1-213ENST00000484088 RNF144AP50876 292 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-213ENST00000484088 DHX9Q08211 1270 aaKnown RBP4.76□□□□□ -1.65
ITGB1-213ENST00000484088 VAC14Q08AM6 782 aa4.76□□□□□ -1.65
ITGB1-213ENST00000484088 CCDC155Q8N6L0 562 aa4.76□□□□□ -1.65
ITGB1-213ENST00000484088 NANOS1Q8WY41 292 aaKnown RBP4.76□□□□□ -1.65
ITGB1-213ENST00000484088 A0A1W2PRU2 124 aa4.75□□□□□ -1.65
ITGB1-213ENST00000484088 PIK3CDO00329 1044 aa4.75□□□□□ -1.65
ITGB1-213ENST00000484088 IL2RAP01589 272 aa4.75□□□□□ -1.65
ITGB1-213ENST00000484088 GAS6Q14393 721 aa4.75□□□□□ -1.65
ITGB1-213ENST00000484088 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.75□□□□□ -1.653e-6■□□□□ 10.2
ITGB1-213ENST00000484088 ZNF295-AS1Q8N0V1 137 aa4.75□□□□□ -1.65
ITGB1-213ENST00000484088 IRF7Q92985 503 aa4.75□□□□□ -1.65
ITGB1-213ENST00000484088 GRIP2Q9C0E4 1043 aa4.75□□□□□ -1.65
ITGB1-213ENST00000484088 HCN2Q9UL51 889 aa4.75□□□□□ -1.65
ITGB1-213ENST00000484088 SUPT5HO00267 1087 aaKnown RBP4.74□□□□□ -1.65
ITGB1-213ENST00000484088 CC2D2BQ6DHV5 1058 aa4.74□□□□□ -1.65
ITGB1-213ENST00000484088 WHAMMQ8TF30 809 aa4.74□□□□□ -1.65
ITGB1-213ENST00000484088 FHDC1Q9C0D6 1143 aaPredicted RBP4.74□□□□□ -1.65
ITGB1-213ENST00000484088 ITGA6P23229 1130 aa4.73□□□□□ -1.65
ITGB1-213ENST00000484088 UBAP2LQ14157 1087 aaKnown RBP4.73□□□□□ -1.65
ITGB1-213ENST00000484088 RAB6BQ9NRW1 208 aa4.73□□□□□ -1.65
ITGB1-213ENST00000484088 PCDHB11Q9Y5F2 797 aa4.73□□□□□ -1.65
ITGB1-213ENST00000484088 POM121CA8CG34 1229 aa4.72□□□□□ -1.65
ITGB1-213ENST00000484088 ATP5J2-PTCD1G3V325 749 aa4.72□□□□□ -1.65
ITGB1-213ENST00000484088 RHOQP17081 205 aa4.72□□□□□ -1.65
ITGB1-213ENST00000484088 UBTFP17480 764 aaKnown RBP4.72□□□□□ -1.65
ITGB1-213ENST00000484088 SCNN1DP51172 638 aa4.72□□□□□ -1.65
ITGB1-213ENST00000484088 CLN3Q13286 438 aa4.72□□□□□ -1.65
ITGB1-213ENST00000484088 SLC16A10Q8TF71 515 aa4.72□□□□□ -1.65
ITGB1-213ENST00000484088 ALG2Q9H553 416 aa4.72□□□□□ -1.65
ITGB1-213ENST00000484088 ARHGEF10LQ9HCE6 1279 aa4.72□□□□□ -1.65
ITGB1-213ENST00000484088 POLMQ9NP87 494 aaPredicted RBP4.72□□□□□ -1.65
ITGB1-213ENST00000484088 UPP2O95045 317 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 ABL2P42684 1182 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 DBN1Q16643 649 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 PRICKLE2Q7Z3G6 844 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 PROSER2Q86WR7 435 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-213ENST00000484088 VWA5B2Q8N398 1253 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 PNMA1Q8ND90 353 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 XAGE2Q96GT9 111 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 UCN2Q96RP3 112 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 ETNK1Q9HBU6 452 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 USP3Q9Y6I4 520 aa4.71□□□□□ -1.66
ITGB1-213ENST00000484088 ARID3CA6NKF2 412 aa4.7□□□□□ -1.66
ITGB1-213ENST00000484088 SPATA31C2B4DYI2 1134 aa4.7□□□□□ -1.66
ITGB1-213ENST00000484088 POU4F2Q12837 409 aa4.7□□□□□ -1.66
ITGB1-213ENST00000484088 ZSCAN1Q8NBB4 408 aa4.7□□□□□ -1.66
ITGB1-213ENST00000484088 KLRG1Q96E93 195 aa4.7□□□□□ -1.66
ITGB1-213ENST00000484088 COL25A1Q9BXS0 654 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-213ENST00000484088 STK17AQ9UEE5 414 aa4.7□□□□□ -1.66
ITGB1-213ENST00000484088 TMEM229AB2RXF0 380 aa4.69□□□□□ -1.66
ITGB1-213ENST00000484088 SLURP2P0DP57 97 aa4.69□□□□□ -1.66
ITGB1-213ENST00000484088 GPC1P35052 558 aa4.69□□□□□ -1.66
ITGB1-213ENST00000484088 MCCD1P59942 119 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-213ENST00000484088 CENPCQ03188 943 aa4.69□□□□□ -1.66
ITGB1-213ENST00000484088 ZNF385CQ66K41 422 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-213ENST00000484088 LYSMD3Q7Z3D4 306 aa4.69□□□□□ -1.66
ITGB1-213ENST00000484088 ZNF837Q96EG3 531 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-213ENST00000484088 CNTNAP3BQ96NU0 1288 aa4.69□□□□□ -1.66
ITGB1-213ENST00000484088 CNTNAP3Q9BZ76 1288 aa4.69□□□□□ -1.66
ITGB1-213ENST00000484088 PCDHGA11Q9Y5H2 935 aa4.69□□□□□ -1.66
ITGB1-213ENST00000484088 MEN1O00255 615 aa4.68□□□□□ -1.66
ITGB1-213ENST00000484088 DKK1O94907 266 aa4.68□□□□□ -1.66
ITGB1-213ENST00000484088 ARHGEF15O94989 841 aa4.68□□□□□ -1.66
ITGB1-213ENST00000484088 INSM1Q01101 510 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-213ENST00000484088 NBPF10Q6P3W6 841 aaKnown RBP4.68□□□□□ -1.66
ITGB1-213ENST00000484088 NBPF15Q8N660 670 aa4.68□□□□□ -1.66
ITGB1-213ENST00000484088 CNKSR1Q969H4 720 aa4.68□□□□□ -1.66
ITGB1-213ENST00000484088 ESYT1Q9BSJ8 1104 aa4.68□□□□□ -1.66
ITGB1-213ENST00000484088 IQSEC3Q9UPP2 1182 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-213ENST00000484088 GNRH1P01148 92 aa4.67□□□□□ -1.66
ITGB1-213ENST00000484088 RNF20Q5VTR2 975 aa4.67□□□□□ -1.66
ITGB1-213ENST00000484088 GPR25O00155 361 aa4.66□□□□□ -1.66
ITGB1-213ENST00000484088 C4orf17Q53FE4 359 aa4.66□□□□□ -1.66
ITGB1-213ENST00000484088 CYP2U1Q7Z449 544 aa4.66□□□□□ -1.66
ITGB1-213ENST00000484088 CCDC125Q86Z20 511 aa4.66□□□□□ -1.66
ITGB1-213ENST00000484088 PLPP7Q8NBV4 271 aa4.66□□□□□ -1.66
ITGB1-213ENST00000484088 C7orf43Q8WVR3 580 aa4.66□□□□□ -1.66
ITGB1-213ENST00000484088 APBB1O00213 710 aa4.65□□□□□ -1.67
ITGB1-213ENST00000484088 ZBTB7BO15156 539 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-213ENST00000484088 EPHA4P54764 986 aa4.65□□□□□ -1.67
ITGB1-213ENST00000484088 LYPD4Q6UWN0 246 aa4.65□□□□□ -1.67
ITGB1-213ENST00000484088 C1orf229Q6ZS94 237 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-213ENST00000484088 RNF135Q8IUD6 432 aa4.65□□□□□ -1.67
ITGB1-213ENST00000484088 TRIM22Q8IYM9 498 aa4.65□□□□□ -1.67
ITGB1-213ENST00000484088 NDFIP2Q9NV92 336 aa4.65□□□□□ -1.67
ITGB1-213ENST00000484088 DNAAF2Q9NVR5 837 aaKnown RBP4.65□□□□□ -1.67
ITGB1-213ENST00000484088 ZNF777Q9ULD5 760 aaPredicted RBP4.65□□□□□ -1.67
ITGB1-213ENST00000484088 DOLKQ9UPQ8 538 aa4.65□□□□□ -1.67
ITGB1-213ENST00000484088 KIAA1024Q9UPX6 916 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms