RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
LRRFIP1-212ENST00000483443 POLD1P28340 1107 aa18.06■□□□□ 0.48
LRRFIP1-212ENST00000483443 HOXC9P31274 260 aa18.06■□□□□ 0.48
LRRFIP1-212ENST00000483443 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
LRRFIP1-212ENST00000483443 TESK2Q96S53 571 aa18.05■□□□□ 0.48
LRRFIP1-212ENST00000483443 SMG6Q86US8 1419 aaKnown RBP18.05■□□□□ 0.48
LRRFIP1-212ENST00000483443 ZNF784Q8NCA9 323 aaPredicted RBP18.04■□□□□ 0.48
LRRFIP1-212ENST00000483443 AKT1S1Q96B36 256 aa18.04■□□□□ 0.48
LRRFIP1-212ENST00000483443 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
LRRFIP1-212ENST00000483443 ZCRB1Q8TBF4 217 aaKnown RBP18.03■□□□□ 0.48
LRRFIP1-212ENST00000483443 PRIM1P49642 420 aaKnown RBP18.02■□□□□ 0.48
LRRFIP1-212ENST00000483443 GPR162Q16538 588 aa18.02■□□□□ 0.48
LRRFIP1-212ENST00000483443 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
LRRFIP1-212ENST00000483443 KAT6BQ8WYB5 2073 aa18.02■□□□□ 0.47
LRRFIP1-212ENST00000483443 CGNL1Q0VF96 1302 aa18.01■□□□□ 0.47
LRRFIP1-212ENST00000483443 TMF1P82094 1093 aa18.01■□□□□ 0.47
LRRFIP1-212ENST00000483443 RAPGEF4Q8WZA2 1011 aa18.01■□□□□ 0.47
LRRFIP1-212ENST00000483443 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
LRRFIP1-212ENST00000483443 MEGF6O75095 1541 aa18■□□□□ 0.47
LRRFIP1-212ENST00000483443 USP47Q96K76 1375 aa18■□□□□ 0.47
LRRFIP1-212ENST00000483443 QSER1Q2KHR3 1735 aa18■□□□□ 0.47
LRRFIP1-212ENST00000483443 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
LRRFIP1-212ENST00000483443 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
LRRFIP1-212ENST00000483443 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
LRRFIP1-212ENST00000483443 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
LRRFIP1-212ENST00000483443 CDCA8Q53HL2 280 aa17.98■□□□□ 0.47
LRRFIP1-212ENST00000483443 NSD2O96028 1365 aa17.97■□□□□ 0.47
LRRFIP1-212ENST00000483443 TATP17735 454 aaPredicted RBP17.97■□□□□ 0.47
LRRFIP1-212ENST00000483443 FBLN1P23142 703 aa17.97■□□□□ 0.47
LRRFIP1-212ENST00000483443 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
LRRFIP1-212ENST00000483443 GGNBP2Q9H3C7 697 aa17.97■□□□□ 0.47
LRRFIP1-212ENST00000483443 KCNQ4P56696 695 aa17.96■□□□□ 0.47
LRRFIP1-212ENST00000483443 FYB1O15117 783 aa17.95■□□□□ 0.46
LRRFIP1-212ENST00000483443 NBPF6Q5VWK0 638 aa17.95■□□□□ 0.46
LRRFIP1-212ENST00000483443 USHBP1Q8N6Y0 703 aa17.95■□□□□ 0.46
LRRFIP1-212ENST00000483443 NBPF4Q96M43 638 aa17.95■□□□□ 0.46
LRRFIP1-212ENST00000483443 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
LRRFIP1-212ENST00000483443 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
LRRFIP1-212ENST00000483443 FLT4P35916 1363 aa17.94■□□□□ 0.46
LRRFIP1-212ENST00000483443 CHD4Q14839 1912 aa17.94■□□□□ 0.46
LRRFIP1-212ENST00000483443 LY75O60449 1722 aa17.94■□□□□ 0.46
LRRFIP1-212ENST00000483443 INSRP06213 1382 aa17.93■□□□□ 0.46
LRRFIP1-212ENST00000483443 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
LRRFIP1-212ENST00000483443 SHANK3Q9BYB0 1731 aa17.93■□□□□ 0.46
LRRFIP1-212ENST00000483443 RGPD2P0DJD1 1756 aa17.91■□□□□ 0.46
LRRFIP1-212ENST00000483443 TUBGCP6Q96RT7 1819 aa17.91■□□□□ 0.46
LRRFIP1-212ENST00000483443 COL24A1Q17RW2 1714 aa17.9■□□□□ 0.46
LRRFIP1-212ENST00000483443 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
LRRFIP1-212ENST00000483443 GOLGB1Q14789 3259 aaKnown RBP17.9■□□□□ 0.46
LRRFIP1-212ENST00000483443 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.45
LRRFIP1-212ENST00000483443 GRIN3BO60391 1043 aa17.89■□□□□ 0.45
LRRFIP1-212ENST00000483443 C1QTNF8P60827 252 aa17.89■□□□□ 0.45
LRRFIP1-212ENST00000483443 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
LRRFIP1-212ENST00000483443 NLGN2Q8NFZ4 835 aa17.89■□□□□ 0.45
LRRFIP1-212ENST00000483443 PALLDQ8WX93 1383 aa17.89■□□□□ 0.45
LRRFIP1-212ENST00000483443 GIGYF1O75420 1035 aaPredicted RBP17.88■□□□□ 0.45
LRRFIP1-212ENST00000483443 COL23A1Q86Y22 540 aaPredicted RBP17.88■□□□□ 0.45
LRRFIP1-212ENST00000483443 SMARCC1Q92922 1105 aaPredicted RBP17.88■□□□□ 0.45
LRRFIP1-212ENST00000483443 KIF20BQ96Q89 1820 aa17.88■□□□□ 0.45
LRRFIP1-212ENST00000483443 MPRIPQ6WCQ1 1025 aa17.87■□□□□ 0.45
LRRFIP1-212ENST00000483443 MSL1Q68DK7 614 aa17.86■□□□□ 0.45
LRRFIP1-212ENST00000483443 AK7Q96M32 723 aa17.86■□□□□ 0.45
LRRFIP1-212ENST00000483443 NSD3Q9BZ95 1437 aa17.86■□□□□ 0.45
LRRFIP1-212ENST00000483443 C5P01031 1676 aa17.86■□□□□ 0.45
LRRFIP1-212ENST00000483443 PPM1GO15355 546 aaPredicted RBP17.84■□□□□ 0.45
LRRFIP1-212ENST00000483443 SPG7Q9UQ90 795 aa17.84■□□□□ 0.45
LRRFIP1-212ENST00000483443 CYP27B1O15528 508 aa17.83■□□□□ 0.44
LRRFIP1-212ENST00000483443 CD2APQ9Y5K6 639 aa17.83■□□□□ 0.44
LRRFIP1-212ENST00000483443 EMILIN1Q9Y6C2 1016 aa17.83■□□□□ 0.44
LRRFIP1-212ENST00000483443 YBX3P16989 372 aaKnown RBP eCLIP17.81■□□□□ 0.44
LRRFIP1-212ENST00000483443 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
LRRFIP1-212ENST00000483443 CARD14Q9BXL6 1004 aa17.8■□□□□ 0.44
LRRFIP1-212ENST00000483443 PKD1L3Q7Z443 1732 aa17.8■□□□□ 0.44
LRRFIP1-212ENST00000483443 NCAPD2Q15021 1401 aa17.8■□□□□ 0.44
LRRFIP1-212ENST00000483443 C4BP0C0L5 1744 aa17.79■□□□□ 0.44
LRRFIP1-212ENST00000483443 PHF14O94880 888 aa17.79■□□□□ 0.44
LRRFIP1-212ENST00000483443 TMOD3Q9NYL9 352 aa17.79■□□□□ 0.44
LRRFIP1-212ENST00000483443 WASHC2AQ641Q2 1341 aa17.78■□□□□ 0.44
LRRFIP1-212ENST00000483443 SSFA2P28290 1259 aa17.78■□□□□ 0.44
LRRFIP1-212ENST00000483443 NKX1-1Q15270 411 aaPredicted RBP17.78■□□□□ 0.44
LRRFIP1-212ENST00000483443 PIGBQ92521 554 aa17.78■□□□□ 0.44
LRRFIP1-212ENST00000483443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.78■□□□□ 0.441e-7■■■■□ 23.5
LRRFIP1-212ENST00000483443 TOGARAM1Q9Y4F4 1720 aa17.78■□□□□ 0.44
LRRFIP1-212ENST00000483443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.77■□□□□ 0.44
LRRFIP1-212ENST00000483443 TIMELESSQ9UNS1 1208 aa17.77■□□□□ 0.44
LRRFIP1-212ENST00000483443 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.43
LRRFIP1-212ENST00000483443 LOC102724428A0A0B4J2F2 783 aa17.76■□□□□ 0.43
LRRFIP1-212ENST00000483443 SIK1P57059 783 aa17.76■□□□□ 0.43
LRRFIP1-212ENST00000483443 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
LRRFIP1-212ENST00000483443 IFNL2Q8IZJ0 200 aa17.75■□□□□ 0.43
LRRFIP1-212ENST00000483443 ITGB4P16144 1822 aa17.75■□□□□ 0.43
LRRFIP1-212ENST00000483443 ATP10DQ9P241 1426 aa17.74■□□□□ 0.43
LRRFIP1-212ENST00000483443 EYA1Q99502 592 aa17.74■□□□□ 0.43
LRRFIP1-212ENST00000483443 POLR3GLQ9BT43 218 aa17.74■□□□□ 0.43
LRRFIP1-212ENST00000483443 PLEKHG2Q9H7P9 1386 aa17.74■□□□□ 0.43
LRRFIP1-212ENST00000483443 PHKG2P15735 406 aa17.73■□□□□ 0.43
LRRFIP1-212ENST00000483443 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
LRRFIP1-212ENST00000483443 GNPATO15228 680 aa17.72■□□□□ 0.43
LRRFIP1-212ENST00000483443 ATP6V1AP38606 617 aa17.72■□□□□ 0.43
LRRFIP1-212ENST00000483443 LINC00116Q8NCU8 138 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms