RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 KNDC1Q76NI1 1749 aa10.27□□□□□ -0.77
CHD6-209ENST00000482596 C10orf71Q711Q0 1435 aa10.26□□□□□ -0.77
CHD6-209ENST00000482596 TNRC6CQ9HCJ0 1690 aaKnown RBP10.26□□□□□ -0.77
CHD6-209ENST00000482596 KCNQ4P56696 695 aa10.26□□□□□ -0.77
CHD6-209ENST00000482596 NUTM2GQ5VZR2 741 aa10.26□□□□□ -0.77
CHD6-209ENST00000482596 PKD1L3Q7Z443 1732 aa10.26□□□□□ -0.77
CHD6-209ENST00000482596 KIF1BO60333 1816 aa10.26□□□□□ -0.77
CHD6-209ENST00000482596 CRB1P82279 1406 aa10.25□□□□□ -0.77
CHD6-209ENST00000482596 PXDNLA1KZ92 1463 aa10.25□□□□□ -0.77
CHD6-209ENST00000482596 AIDAQ96BJ3 306 aa10.25□□□□□ -0.77
CHD6-209ENST00000482596 GPRASP1Q5JY77 1395 aa10.25□□□□□ -0.77
CHD6-209ENST00000482596 DLL1O00548 723 aa10.24□□□□□ -0.77
CHD6-209ENST00000482596 VGFO15240 615 aaPredicted RBP10.24□□□□□ -0.77
CHD6-209ENST00000482596 HSPA8P11142 646 aaKnown RBP10.24□□□□□ -0.77
CHD6-209ENST00000482596 PRPF38BQ5VTL8 546 aaKnown RBP10.24□□□□□ -0.77
CHD6-209ENST00000482596 IFNLR1Q8IU57 520 aaPredicted RBP10.24□□□□□ -0.77
CHD6-209ENST00000482596 HIRIP3Q9BW71 556 aaPredicted RBP10.24□□□□□ -0.77
CHD6-209ENST00000482596 CCDC61Q9Y6R9 512 aa10.24□□□□□ -0.77
CHD6-209ENST00000482596 COL23A1Q86Y22 540 aaPredicted RBP10.23□□□□□ -0.77
CHD6-209ENST00000482596 FAM212AQ96EL1 285 aa10.23□□□□□ -0.77
CHD6-209ENST00000482596 PPLO60437 1756 aa10.23□□□□□ -0.77
CHD6-209ENST00000482596 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
CHD6-209ENST00000482596 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
CHD6-209ENST00000482596 TMEM132EQ6IEE7 984 aa10.22□□□□□ -0.77
CHD6-209ENST00000482596 BRD4O60885 1362 aaPredicted RBP10.22□□□□□ -0.77
CHD6-209ENST00000482596 PIK3C2AO00443 1686 aa10.22□□□□□ -0.77
CHD6-209ENST00000482596 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
CHD6-209ENST00000482596 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.77
CHD6-209ENST00000482596 WBP1LQ9NX94 342 aa10.21□□□□□ -0.77
CHD6-209ENST00000482596 ABCC11Q96J66 1382 aa10.21□□□□□ -0.78
CHD6-209ENST00000482596 TRPM1Q7Z4N2 1603 aa10.21□□□□□ -0.78
CHD6-209ENST00000482596 GALR2O43603 387 aaPredicted RBP10.2□□□□□ -0.78
CHD6-209ENST00000482596 USP6P35125 1406 aa10.2□□□□□ -0.78
CHD6-209ENST00000482596 C9orf131Q5VYM1 1079 aa10.2□□□□□ -0.78
CHD6-209ENST00000482596 KDM2BQ8NHM5 1336 aa10.2□□□□□ -0.78
CHD6-209ENST00000482596 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
CHD6-209ENST00000482596 ARHGAP27Q6ZUM4 889 aa10.19□□□□□ -0.78
CHD6-209ENST00000482596 KIAA1551Q9HCM1 1747 aa10.19□□□□□ -0.78
CHD6-209ENST00000482596 CUL9Q8IWT3 2517 aa10.18□□□□□ -0.78
CHD6-209ENST00000482596 QRICH2Q9H0J4 1663 aa10.18□□□□□ -0.78
CHD6-209ENST00000482596 ANKARQ7Z5J8 1434 aa10.18□□□□□ -0.78
CHD6-209ENST00000482596 CPDO75976 1380 aa10.18□□□□□ -0.78
CHD6-209ENST00000482596 CNTNAP1P78357 1384 aa10.18□□□□□ -0.78
CHD6-209ENST00000482596 PLEKHG2Q9H7P9 1386 aa10.18□□□□□ -0.78
CHD6-209ENST00000482596 PRR36Q9H6K5 1346 aa10.18□□□□□ -0.78
CHD6-209ENST00000482596 SAFB2Q14151 953 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHD6-209ENST00000482596 ANKRD30BQ9BXX2 1392 aa10.17□□□□□ -0.78
CHD6-209ENST00000482596 VEGFBP49765 207 aa10.17□□□□□ -0.78
CHD6-209ENST00000482596 TOM1L2Q6ZVM7 507 aa10.17□□□□□ -0.78
CHD6-209ENST00000482596 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
CHD6-209ENST00000482596 KIF12Q96FN5 646 aa10.17□□□□□ -0.78
CHD6-209ENST00000482596 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
CHD6-209ENST00000482596 NUP155O75694 1391 aa10.16□□□□□ -0.78
CHD6-209ENST00000482596 A0A0C4DFX4 3053 aa10.16□□□□□ -0.78
CHD6-209ENST00000482596 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
CHD6-209ENST00000482596 SLC27A3Q5K4L6 730 aa10.15□□□□□ -0.78
CHD6-209ENST00000482596 NGDNQ8NEJ9 315 aaKnown RBP10.15□□□□□ -0.78
CHD6-209ENST00000482596 MS4A3Q96HJ5 214 aa10.15□□□□□ -0.78
CHD6-209ENST00000482596 COL18A1P39060 1754 aa10.15□□□□□ -0.78
CHD6-209ENST00000482596 YTHDC2Q9H6S0 1430 aaKnown RBP10.15□□□□□ -0.79
CHD6-209ENST00000482596 ADGRF5Q8IZF2 1346 aa10.14□□□□□ -0.79
CHD6-209ENST00000482596 ZBTB7CA1YPR0 619 aa10.14□□□□□ -0.79
CHD6-209ENST00000482596 EXOC5O00471 708 aa10.14□□□□□ -0.79
CHD6-209ENST00000482596 GSE1Q14687 1217 aa10.14□□□□□ -0.79
CHD6-209ENST00000482596 SMIM5Q71RC9 77 aa10.14□□□□□ -0.79
CHD6-209ENST00000482596 MCOLN1Q9GZU1 580 aa10.14□□□□□ -0.79
CHD6-209ENST00000482596 LY75O60449 1722 aa10.13□□□□□ -0.79
CHD6-209ENST00000482596 SBF1O95248 1867 aa10.13□□□□□ -0.79
CHD6-209ENST00000482596 USP54Q70EL1 1684 aa10.13□□□□□ -0.79
CHD6-209ENST00000482596 MAP3K13O43283 966 aa10.13□□□□□ -0.79
CHD6-209ENST00000482596 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
CHD6-209ENST00000482596 SOX10P56693 466 aa10.12□□□□□ -0.79
CHD6-209ENST00000482596 HABP4Q5JVS0 413 aaKnown RBP10.12□□□□□ -0.79
CHD6-209ENST00000482596 CDCA7Q9BWT1 371 aaPredicted RBP10.12□□□□□ -0.79
CHD6-209ENST00000482596 RNF181Q9P0P0 153 aa10.12□□□□□ -0.79
CHD6-209ENST00000482596 VPS8Q8N3P4 1428 aa10.12□□□□□ -0.79
CHD6-209ENST00000482596 RGPD5Q99666 1765 aa10.11□□□□□ -0.79
CHD6-209ENST00000482596 BRCA1P38398 1863 aaKnown RBP10.11□□□□□ -0.79
CHD6-209ENST00000482596 KIF13BQ9NQT8 1826 aa10.1□□□□□ -0.79
CHD6-209ENST00000482596 PRAM1Q96QH2 718 aa10.1□□□□□ -0.79
CHD6-209ENST00000482596 RPGRIP1LQ68CZ1 1315 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 WDR17Q8IZU2 1322 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 SZT2Q5T011 3432 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 ABCC6O95255 1503 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 CASP8AP2Q9UKL3 1982 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 A0A0G2JLW4 131 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 GCP02774 474 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 VEGFAP15692 232 aaPredicted RBP10.09□□□□□ -0.79
CHD6-209ENST00000482596 SIRT1Q96EB6 747 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 AXIN2Q9Y2T1 843 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 ITSN1Q15811 1721 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 ARFGEF1Q9Y6D6 1849 aa10.09□□□□□ -0.79
CHD6-209ENST00000482596 ERBB3P21860 1342 aa10.08□□□□□ -0.8
CHD6-209ENST00000482596 PITPNM2Q9BZ72 1349 aa10.08□□□□□ -0.8
CHD6-209ENST00000482596 PYGBP11216 843 aa10.08□□□□□ -0.8
CHD6-209ENST00000482596 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
CHD6-209ENST00000482596 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
CHD6-209ENST00000482596 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
CHD6-209ENST00000482596 POTECB2RU33 542 aa10.07□□□□□ -0.8
CHD6-209ENST00000482596 FCHSD2O94868 740 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms