RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 SHANK3Q9BYB0 1731 aa15.65■□□□□ 0.1
SNRNP25-206ENST00000481947 TATP17735 454 aaPredicted RBP15.65■□□□□ 0.1
SNRNP25-206ENST00000481947 RAPGEF4Q8WZA2 1011 aa15.65■□□□□ 0.1
SNRNP25-206ENST00000481947 NGLY1Q96IV0 654 aa15.65■□□□□ 0.1
SNRNP25-206ENST00000481947 LRRC37A3O60309 1634 aa15.65■□□□□ 0.1
SNRNP25-206ENST00000481947 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
SNRNP25-206ENST00000481947 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
SNRNP25-206ENST00000481947 CENPBP07199 599 aaPredicted RBP15.64■□□□□ 0.09
SNRNP25-206ENST00000481947 PDE3BQ13370 1112 aa15.64■□□□□ 0.09
SNRNP25-206ENST00000481947 AMOTQ4VCS5 1084 aa15.64■□□□□ 0.09
SNRNP25-206ENST00000481947 PLEKHO1Q53GL0 409 aaPredicted RBP15.64■□□□□ 0.09
SNRNP25-206ENST00000481947 UNC5CLQ8IV45 518 aa15.64■□□□□ 0.09
SNRNP25-206ENST00000481947 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
SNRNP25-206ENST00000481947 MEX3CQ5U5Q3 659 aaKnown RBP15.63■□□□□ 0.09
SNRNP25-206ENST00000481947 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
SNRNP25-206ENST00000481947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
SNRNP25-206ENST00000481947 ADAMTS7Q9UKP4 1686 aa15.63■□□□□ 0.09
SNRNP25-206ENST00000481947 SPATA31A1Q5TZJ5 1347 aa15.63■□□□□ 0.09
SNRNP25-206ENST00000481947 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
SNRNP25-206ENST00000481947 SPATA31A5Q5VU36 1347 aa15.62■□□□□ 0.09
SNRNP25-206ENST00000481947 SPATA31A7Q8IWB4 1347 aa15.62■□□□□ 0.09
SNRNP25-206ENST00000481947 MAP3K5Q99683 1374 aa15.62■□□□□ 0.09
SNRNP25-206ENST00000481947 IL2RBP14784 551 aa15.61■□□□□ 0.09
SNRNP25-206ENST00000481947 VPS72Q15906 364 aa15.61■□□□□ 0.09
SNRNP25-206ENST00000481947 CDCA7LQ96GN5 454 aa15.61■□□□□ 0.09
SNRNP25-206ENST00000481947 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 SLFN5Q08AF3 891 aa15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 ZNF530Q6P9A1 599 aaPredicted RBP15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 USP35Q9P2H5 1018 aa15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 USP21Q9UK80 565 aa15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 SPG7Q9UQ90 795 aa15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 THRAP3Q9Y2W1 955 aaKnown RBP15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 AFF2P51816 1311 aa15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 IL16Q14005 1332 aa15.6■□□□□ 0.09
SNRNP25-206ENST00000481947 SCN11AQ9UI33 1791 aa15.59■□□□□ 0.09
SNRNP25-206ENST00000481947 GNAT3A8MTJ3 354 aa15.59■□□□□ 0.09
SNRNP25-206ENST00000481947 AKAP4Q5JQC9 854 aa15.59■□□□□ 0.09
SNRNP25-206ENST00000481947 TRMT2AQ8IZ69 625 aaKnown RBP15.59■□□□□ 0.09
SNRNP25-206ENST00000481947 E9PSI1 815 aa15.58■□□□□ 0.08
SNRNP25-206ENST00000481947 DCTN1Q14203 1278 aa15.58■□□□□ 0.08
SNRNP25-206ENST00000481947 THUMPD2Q9BTF0 503 aaKnown RBP15.58■□□□□ 0.08
SNRNP25-206ENST00000481947 ATRNO75882 1429 aa15.58■□□□□ 0.08
SNRNP25-206ENST00000481947 GLI3P10071 1580 aa15.58■□□□□ 0.08
SNRNP25-206ENST00000481947 DUSP27Q5VZP5 1158 aa15.57■□□□□ 0.08
SNRNP25-206ENST00000481947 BARGINQ6ZT62 677 aa15.57■□□□□ 0.08
SNRNP25-206ENST00000481947 MCM10Q7L590 875 aa15.57■□□□□ 0.08
SNRNP25-206ENST00000481947 ZCRB1Q8TBF4 217 aaKnown RBP15.57■□□□□ 0.08
SNRNP25-206ENST00000481947 CEMIPQ8WUJ3 1361 aa15.57■□□□□ 0.08
SNRNP25-206ENST00000481947 SIPA1L3O60292 1781 aaPredicted RBP15.57■□□□□ 0.08
SNRNP25-206ENST00000481947 CYP27B1O15528 508 aa15.56■□□□□ 0.08
SNRNP25-206ENST00000481947 PHKG2P15735 406 aa15.56■□□□□ 0.08
SNRNP25-206ENST00000481947 CALD1Q05682 793 aaKnown RBP15.56■□□□□ 0.08
SNRNP25-206ENST00000481947 C1orf141Q5JVX7 400 aa15.56■□□□□ 0.08
SNRNP25-206ENST00000481947 IL17REQ8NFR9 667 aa15.56■□□□□ 0.08
SNRNP25-206ENST00000481947 RTF1Q92541 710 aaKnown RBP15.56■□□□□ 0.08
SNRNP25-206ENST00000481947 CDCA7Q9BWT1 371 aaPredicted RBP15.56■□□□□ 0.08
SNRNP25-206ENST00000481947 THSD7AQ9UPZ6 1657 aa15.56■□□□□ 0.08
SNRNP25-206ENST00000481947 TNS2Q63HR2 1409 aa15.55■□□□□ 0.08
SNRNP25-206ENST00000481947 PCDH11XQ9BZA7 1347 aa15.55■□□□□ 0.08
SNRNP25-206ENST00000481947 PCDH11YQ9BZA8 1340 aa15.55■□□□□ 0.08
SNRNP25-206ENST00000481947 IFNL2Q8IZJ0 200 aa15.55■□□□□ 0.08
SNRNP25-206ENST00000481947 CCDC9Q9Y3X0 531 aaKnown RBP15.55■□□□□ 0.08
SNRNP25-206ENST00000481947 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
SNRNP25-206ENST00000481947 ZNF853P0CG23 659 aa15.54■□□□□ 0.08
SNRNP25-206ENST00000481947 LGR6Q9HBX8 967 aa15.54■□□□□ 0.08
SNRNP25-206ENST00000481947 IFT57Q9NWB7 429 aa15.54■□□□□ 0.08
SNRNP25-206ENST00000481947 RNMTO43148 476 aaKnown RBP15.53■□□□□ 0.08
SNRNP25-206ENST00000481947 MPRIPQ6WCQ1 1025 aa15.53■□□□□ 0.08
SNRNP25-206ENST00000481947 MYH16Q9H6N6 1097 aa15.53■□□□□ 0.08
SNRNP25-206ENST00000481947 TRPC5Q9UL62 973 aaPredicted RBP15.53■□□□□ 0.08
SNRNP25-206ENST00000481947 TOGARAM1Q9Y4F4 1720 aa15.53■□□□□ 0.08
SNRNP25-206ENST00000481947 MRC1P22897 1456 aa15.52■□□□□ 0.08
SNRNP25-206ENST00000481947 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.08
SNRNP25-206ENST00000481947 GNAI1P63096 354 aa15.52■□□□□ 0.08
SNRNP25-206ENST00000481947 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
SNRNP25-206ENST00000481947 KDM3BQ7LBC6 1761 aa15.52■□□□□ 0.07
SNRNP25-206ENST00000481947 HSP90AB1P08238 724 aaKnown RBP15.51■□□□□ 0.07
SNRNP25-206ENST00000481947 NKX1-1Q15270 411 aaPredicted RBP15.51■□□□□ 0.07
SNRNP25-206ENST00000481947 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
SNRNP25-206ENST00000481947 GJD4Q96KN9 370 aaPredicted RBP15.51■□□□□ 0.07
SNRNP25-206ENST00000481947 EXOC5O00471 708 aa15.5■□□□□ 0.07
SNRNP25-206ENST00000481947 CHL1O00533 1208 aa15.5■□□□□ 0.07
SNRNP25-206ENST00000481947 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
SNRNP25-206ENST00000481947 DCAF5Q96JK2 942 aa15.5■□□□□ 0.07
SNRNP25-206ENST00000481947 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
SNRNP25-206ENST00000481947 DDB1Q16531 1140 aa15.49■□□□□ 0.07
SNRNP25-206ENST00000481947 DDX54Q8TDD1 881 aaKnown RBP15.49■□□□□ 0.07
SNRNP25-206ENST00000481947 QTRT2Q9H974 415 aaKnown RBP15.49■□□□□ 0.07
SNRNP25-206ENST00000481947 MBIPQ9NS73 344 aa15.49■□□□□ 0.07
SNRNP25-206ENST00000481947 TAF7Q15545 349 aaPredicted RBP15.48■□□□□ 0.07
SNRNP25-206ENST00000481947 BABAM1Q9NWV8 329 aa15.48■□□□□ 0.07
SNRNP25-206ENST00000481947 ITGB4P16144 1822 aa15.47■□□□□ 0.07
SNRNP25-206ENST00000481947 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
SNRNP25-206ENST00000481947 TEFQ10587 303 aa15.47■□□□□ 0.07
SNRNP25-206ENST00000481947 DOT1LQ8TEK3 1739 aa15.47■□□□□ 0.07
SNRNP25-206ENST00000481947 ZNF772Q68DY9 489 aaPredicted RBP15.46■□□□□ 0.07
SNRNP25-206ENST00000481947 SLC52A2Q9HAB3 445 aa15.46■□□□□ 0.07
SNRNP25-206ENST00000481947 PAPPAQ13219 1627 aa15.46■□□□□ 0.06
SNRNP25-206ENST00000481947 EXOSC9Q06265 439 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms