RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 ITPRIPQ8IWB1 547 aa25.27■■□□□ 1.64
CHKB-209ENST00000481673 BACH2Q9BYV9 841 aa25.26■■□□□ 1.63
CHKB-209ENST00000481673 API5Q9BZZ5 524 aaKnown RBP25.26■■□□□ 1.63
CHKB-209ENST00000481673 MSH6P52701 1360 aa25.25■■□□□ 1.63
CHKB-209ENST00000481673 PCDHB15Q9Y5E8 787 aa25.25■■□□□ 1.63
CHKB-209ENST00000481673 SOS1Q07889 1333 aaPredicted RBP25.24■■□□□ 1.63
CHKB-209ENST00000481673 NPHP3Q7Z494 1330 aa25.24■■□□□ 1.63
CHKB-209ENST00000481673 HSPA2P54652 639 aa25.23■■□□□ 1.63
CHKB-209ENST00000481673 TMEM57Q8N5G2 664 aa25.23■■□□□ 1.63
CHKB-209ENST00000481673 LTV1Q96GA3 475 aaPredicted RBP25.23■■□□□ 1.63
CHKB-209ENST00000481673 ELL2O00472 640 aaPredicted RBP25.22■■□□□ 1.63
CHKB-209ENST00000481673 TRPM3Q9HCF6 1732 aaPredicted RBP25.22■■□□□ 1.63
CHKB-209ENST00000481673 LTN1O94822 1766 aa25.22■■□□□ 1.63
CHKB-209ENST00000481673 MAP3K5Q99683 1374 aa25.22■■□□□ 1.63
CHKB-209ENST00000481673 KDM4FA0A1W2PPD8 638 aa25.21■■□□□ 1.63
CHKB-209ENST00000481673 HDAC1Q13547 482 aaPredicted RBP25.21■■□□□ 1.63
CHKB-209ENST00000481673 LMOD2Q6P5Q4 547 aa25.21■■□□□ 1.63
CHKB-209ENST00000481673 ZBTB40Q9NUA8 1239 aa25.21■■□□□ 1.63
CHKB-209ENST00000481673 XPCQ01831 940 aaPredicted RBP25.21■■□□□ 1.63
CHKB-209ENST00000481673 TSPYL4Q9UJ04 414 aa25.2■■□□□ 1.62
CHKB-209ENST00000481673 NBPF6Q5VWK0 638 aa25.19■■□□□ 1.62
CHKB-209ENST00000481673 NBPF4Q96M43 638 aa25.19■■□□□ 1.62
CHKB-209ENST00000481673 LMTK3Q96Q04 1460 aa25.19■■□□□ 1.62
CHKB-209ENST00000481673 ABCC4O15439 1325 aa25.19■■□□□ 1.62
CHKB-209ENST00000481673 AMOTQ4VCS5 1084 aa25.18■■□□□ 1.62
CHKB-209ENST00000481673 ANP32AP39687 249 aaKnown RBP25.17■■□□□ 1.62
CHKB-209ENST00000481673 PTPRCP08575 1304 aa25.17■■□□□ 1.62
CHKB-209ENST00000481673 STRCP1A6NGW2 1772 aa25.17■■□□□ 1.62
CHKB-209ENST00000481673 NCAPD2Q15021 1401 aa25.16■■□□□ 1.62
CHKB-209ENST00000481673 TAF7Q15545 349 aaPredicted RBP25.15■■□□□ 1.62
CHKB-209ENST00000481673 FAM161AQ3B820 660 aa25.15■■□□□ 1.62
CHKB-209ENST00000481673 PLEKHO1Q53GL0 409 aaPredicted RBP25.15■■□□□ 1.62
CHKB-209ENST00000481673 CHMP4AQ9BY43 222 aa25.15■■□□□ 1.62
CHKB-209ENST00000481673 ZBTB7BO15156 539 aaPredicted RBP25.14■■□□□ 1.61
CHKB-209ENST00000481673 ANKRD24Q8TF21 1146 aa25.13■■□□□ 1.61
CHKB-209ENST00000481673 ALS2Q96Q42 1657 aa25.13■■□□□ 1.61
CHKB-209ENST00000481673 ZBTB7CA1YPR0 619 aa25.13■■□□□ 1.61
CHKB-209ENST00000481673 IL17REQ8NFR9 667 aa25.13■■□□□ 1.61
CHKB-209ENST00000481673 RGS3P49796 1198 aa25.12■■□□□ 1.61
CHKB-209ENST00000481673 LRRC37A3O60309 1634 aa25.11■■□□□ 1.61
CHKB-209ENST00000481673 AKAP4Q5JQC9 854 aa25.11■■□□□ 1.61
CHKB-209ENST00000481673 USHBP1Q8N6Y0 703 aa25.11■■□□□ 1.61
CHKB-209ENST00000481673 CEMIPQ8WUJ3 1361 aa25.11■■□□□ 1.61
CHKB-209ENST00000481673 TNS3Q68CZ2 1445 aa25.1■■□□□ 1.61
CHKB-209ENST00000481673 INTS3Q68E01 1043 aaKnown RBP25.1■■□□□ 1.61
CHKB-209ENST00000481673 SKAP1Q86WV1 359 aa25.09■■□□□ 1.61
CHKB-209ENST00000481673 PLEKHG2Q9H7P9 1386 aa25.09■■□□□ 1.61
CHKB-209ENST00000481673 SMC5Q8IY18 1101 aa25.09■■□□□ 1.61
CHKB-209ENST00000481673 SPATA31A3Q5VYP0 1347 aa25.07■■□□□ 1.6
CHKB-209ENST00000481673 ABCC6O95255 1503 aa25.07■■□□□ 1.6
CHKB-209ENST00000481673 STK31Q9BXU1 1019 aa25.07■■□□□ 1.6
CHKB-209ENST00000481673 MIS18AQ9NYP9 233 aa25.07■■□□□ 1.6
CHKB-209ENST00000481673 PDZRN3Q9UPQ7 1066 aa25.07■■□□□ 1.6
CHKB-209ENST00000481673 KRT24Q2M2I5 525 aa25.06■■□□□ 1.6
CHKB-209ENST00000481673 CCDC30Q5VVM6 783 aa25.06■■□□□ 1.6
CHKB-209ENST00000481673 LRRC59Q96AG4 307 aaKnown RBP25.06■■□□□ 1.6
CHKB-209ENST00000481673 ERBB3P21860 1342 aa25.06■■□□□ 1.6
CHKB-209ENST00000481673 SLC4A2P04920 1241 aa25.06■■□□□ 1.6
CHKB-209ENST00000481673 STRCQ7RTU9 1775 aa25.06■■□□□ 1.6
CHKB-209ENST00000481673 OVOS2A0A0G2JMS6 1433 aa25.05■■□□□ 1.6
CHKB-209ENST00000481673 PXDNQ92626 1479 aa25.05■■□□□ 1.6
CHKB-209ENST00000481673 AXIN2Q9Y2T1 843 aa25.05■■□□□ 1.6
CHKB-209ENST00000481673 MED1Q15648 1581 aaPredicted RBP25.05■■□□□ 1.6
CHKB-209ENST00000481673 C1orf141Q5JVX7 400 aa25.04■■□□□ 1.6
CHKB-209ENST00000481673 C8orf34Q49A92 452 aa25.04■■□□□ 1.6
CHKB-209ENST00000481673 ZNF530Q6P9A1 599 aaPredicted RBP25.04■■□□□ 1.6
CHKB-209ENST00000481673 CAMTA1Q9Y6Y1 1673 aa25.03■■□□□ 1.6
CHKB-209ENST00000481673 HOXB7P09629 217 aa25.03■■□□□ 1.6
CHKB-209ENST00000481673 ZC3H6P61129 1189 aaKnown RBP25.03■■□□□ 1.6
CHKB-209ENST00000481673 BRINP3Q76B58 766 aa25.03■■□□□ 1.6
CHKB-209ENST00000481673 GCC1Q96CN9 775 aa25.03■■□□□ 1.6
CHKB-209ENST00000481673 IPO9Q96P70 1041 aaKnown RBP25.03■■□□□ 1.6
CHKB-209ENST00000481673 SLAIN2Q9P270 581 aa25.02■■□□□ 1.6
CHKB-209ENST00000481673 CPDO75976 1380 aa25.02■■□□□ 1.6
CHKB-209ENST00000481673 TEFQ10587 303 aa25■■□□□ 1.59
CHKB-209ENST00000481673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25■■□□□ 1.593e-8■□□□□ 11.2
CHKB-209ENST00000481673 CCT4P50991 539 aaKnown RBP24.99■■□□□ 1.59
CHKB-209ENST00000481673 DDX17Q92841 729 aaKnown RBP24.99■■□□□ 1.59
CHKB-209ENST00000481673 RAPGEF4Q8WZA2 1011 aa24.98■■□□□ 1.59
CHKB-209ENST00000481673 ZNF335Q9H4Z2 1342 aaPredicted RBP24.98■■□□□ 1.59
CHKB-209ENST00000481673 RGS12O14924 1447 aa24.98■■□□□ 1.59
CHKB-209ENST00000481673 SOS2Q07890 1332 aaPredicted RBP24.97■■□□□ 1.59
CHKB-209ENST00000481673 LMO7Q8WWI1 1683 aa24.96■■□□□ 1.59
CHKB-209ENST00000481673 PLEKHG5O94827 1062 aa24.96■■□□□ 1.59
CHKB-209ENST00000481673 NUCB1Q02818 461 aa24.96■■□□□ 1.59
CHKB-209ENST00000481673 XIRP1Q702N8 1843 aaKnown RBP24.96■■□□□ 1.59
CHKB-209ENST00000481673 RNMTO43148 476 aaKnown RBP24.96■■□□□ 1.59
CHKB-209ENST00000481673 MSH5O43196 834 aa24.96■■□□□ 1.59
CHKB-209ENST00000481673 RPAP2Q8IXW5 612 aaPredicted RBP24.96■■□□□ 1.59
CHKB-209ENST00000481673 LGR6Q9HBX8 967 aa24.96■■□□□ 1.59
CHKB-209ENST00000481673 DDRGK1Q96HY6 314 aa24.94■■□□□ 1.58
CHKB-209ENST00000481673 NLRP2Q9NX02 1062 aa24.94■■□□□ 1.58
CHKB-209ENST00000481673 SPG7Q9UQ90 795 aa24.94■■□□□ 1.58
CHKB-209ENST00000481673 TATP17735 454 aaPredicted RBP24.94■■□□□ 1.58
CHKB-209ENST00000481673 EIF4A1P60842 406 aaKnown RBP24.94■■□□□ 1.58
CHKB-209ENST00000481673 BTBD11A6QL63 1104 aa24.93■■□□□ 1.58
CHKB-209ENST00000481673 ERICH6Q7L0X2 663 aa24.93■■□□□ 1.58
CHKB-209ENST00000481673 FLIIQ13045 1269 aa24.92■■□□□ 1.58
CHKB-209ENST00000481673 HDGFL1Q5TGJ6 251 aa24.92■■□□□ 1.58
CHKB-209ENST00000481673 RGPD2P0DJD1 1756 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms