RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 PRIM1P49642 420 aaKnown RBP22.17■■□□□ 1.14
HDLBP-238ENST00000479894 CCNL1Q9UK58 526 aaPredicted RBP22.17■■□□□ 1.14
HDLBP-238ENST00000479894 TAF1LQ8IZX4 1826 aa22.17■■□□□ 1.14
HDLBP-238ENST00000479894 C5P01031 1676 aa22.17■■□□□ 1.14
HDLBP-238ENST00000479894 MSH5O43196 834 aa22.16■■□□□ 1.14
HDLBP-238ENST00000479894 SYTL4Q96C24 671 aaPredicted RBP22.16■■□□□ 1.14
HDLBP-238ENST00000479894 APLP1P51693 650 aa22.15■■□□□ 1.14
HDLBP-238ENST00000479894 ZNF526Q8TF50 670 aaPredicted RBP22.15■■□□□ 1.14
HDLBP-238ENST00000479894 FLAD1Q8NFF5 587 aa22.14■■□□□ 1.13
HDLBP-238ENST00000479894 KIF3CO14782 793 aa22.13■■□□□ 1.13
HDLBP-238ENST00000479894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.13■■□□□ 1.13
HDLBP-238ENST00000479894 MSL1Q68DK7 614 aa22.12■■□□□ 1.13
HDLBP-238ENST00000479894 USP47Q96K76 1375 aa22.12■■□□□ 1.13
HDLBP-238ENST00000479894 SBNO2Q9Y2G9 1366 aa22.11■■□□□ 1.13
HDLBP-238ENST00000479894 NME9Q86XW9 330 aa22.1■■□□□ 1.13
HDLBP-238ENST00000479894 IP6K1Q92551 441 aa22.1■■□□□ 1.13
HDLBP-238ENST00000479894 RGPD2P0DJD1 1756 aa22.1■■□□□ 1.13
HDLBP-238ENST00000479894 CD163L1Q9NR16 1453 aa22.09■■□□□ 1.13
HDLBP-238ENST00000479894 CICQ96RK0 1608 aaPredicted RBP22.09■■□□□ 1.13
HDLBP-238ENST00000479894 DNAJC5GQ8N7S2 189 aa22.08■■□□□ 1.13
HDLBP-238ENST00000479894 ZCRB1Q8TBF4 217 aaKnown RBP22.07■■□□□ 1.12
HDLBP-238ENST00000479894 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
HDLBP-238ENST00000479894 EDC4Q6P2E9 1401 aaKnown RBP22.06■■□□□ 1.12
HDLBP-238ENST00000479894 UBR3Q6ZT12 1888 aa22.06■■□□□ 1.12
HDLBP-238ENST00000479894 IGSF1Q8N6C5 1336 aa22.06■■□□□ 1.12
HDLBP-238ENST00000479894 WDR90Q96KV7 1748 aa22.05■■□□□ 1.12
HDLBP-238ENST00000479894 TOMM70O94826 608 aa22.04■■□□□ 1.12
HDLBP-238ENST00000479894 C4BP0C0L5 1744 aa22.03■■□□□ 1.12
HDLBP-238ENST00000479894 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
HDLBP-238ENST00000479894 MEGF6O75095 1541 aa22.02■■□□□ 1.12
HDLBP-238ENST00000479894 TOGARAM1Q9Y4F4 1720 aa22.02■■□□□ 1.12
HDLBP-238ENST00000479894 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
HDLBP-238ENST00000479894 LTV1Q96GA3 475 aaPredicted RBP22.01■■□□□ 1.11
HDLBP-238ENST00000479894 CGNL1Q0VF96 1302 aa22.01■■□□□ 1.11
HDLBP-238ENST00000479894 NSD3Q9BZ95 1437 aa22■■□□□ 1.11
HDLBP-238ENST00000479894 CCER1Q8TC90 406 aaPredicted RBP22■■□□□ 1.11
HDLBP-238ENST00000479894 KIF13BQ9NQT8 1826 aa22■■□□□ 1.11
HDLBP-238ENST00000479894 ITGB4P16144 1822 aa21.99■■□□□ 1.11
HDLBP-238ENST00000479894 L3MBTL2Q969R5 705 aa21.98■■□□□ 1.11
HDLBP-238ENST00000479894 PALLDQ8WX93 1383 aa21.97■■□□□ 1.11
HDLBP-238ENST00000479894 HOXC9P31274 260 aa21.96■■□□□ 1.11
HDLBP-238ENST00000479894 TMC1Q8TDI8 760 aa21.96■■□□□ 1.11
HDLBP-238ENST00000479894 TERF2IPQ9NYB0 399 aa21.96■■□□□ 1.11
HDLBP-238ENST00000479894 AK7Q96M32 723 aa21.95■■□□□ 1.1
HDLBP-238ENST00000479894 MAP3K19Q56UN5 1328 aa21.95■■□□□ 1.1
HDLBP-238ENST00000479894 JMYQ8N9B5 988 aa21.94■■□□□ 1.1
HDLBP-238ENST00000479894 SLC12A5Q9H2X9 1139 aa21.94■■□□□ 1.1
HDLBP-238ENST00000479894 A0A1W2PP64 1363 aa21.94■■□□□ 1.1
HDLBP-238ENST00000479894 KIAA1551Q9HCM1 1747 aa21.94■■□□□ 1.1
HDLBP-238ENST00000479894 MAP2P11137 1827 aaKnown RBP21.93■■□□□ 1.1
HDLBP-238ENST00000479894 AMPHP49418 695 aa21.93■■□□□ 1.1
HDLBP-238ENST00000479894 COL13A1Q5TAT6 717 aaPredicted RBP21.93■■□□□ 1.1
HDLBP-238ENST00000479894 SMARCC1Q92922 1105 aaPredicted RBP21.93■■□□□ 1.1
HDLBP-238ENST00000479894 WWC3Q9ULE0 1092 aa21.93■■□□□ 1.1
HDLBP-238ENST00000479894 RTL1A6NKG5 1358 aa21.92■■□□□ 1.1
HDLBP-238ENST00000479894 SSFA2P28290 1259 aa21.92■■□□□ 1.1
HDLBP-238ENST00000479894 RBM46Q8TBY0 533 aaKnown RBP21.92■■□□□ 1.1
HDLBP-238ENST00000479894 KLRG1Q96E93 195 aa21.92■■□□□ 1.1
HDLBP-238ENST00000479894 N4BP2Q86UW6 1770 aaPredicted RBP21.92■■□□□ 1.1
HDLBP-238ENST00000479894 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
HDLBP-238ENST00000479894 BRCA1P38398 1863 aaKnown RBP21.91■■□□□ 1.1
HDLBP-238ENST00000479894 PCDH11XQ9BZA7 1347 aa21.9■■□□□ 1.1
HDLBP-238ENST00000479894 PCDH11YQ9BZA8 1340 aa21.9■■□□□ 1.1
HDLBP-238ENST00000479894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.9■■□□□ 1.1
HDLBP-238ENST00000479894 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
HDLBP-238ENST00000479894 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
HDLBP-238ENST00000479894 COG3Q96JB2 828 aa21.89■■□□□ 1.09
HDLBP-238ENST00000479894 TIMELESSQ9UNS1 1208 aa21.89■■□□□ 1.09
HDLBP-238ENST00000479894 PXDNLA1KZ92 1463 aa21.89■■□□□ 1.09
HDLBP-238ENST00000479894 ARFGEF1Q9Y6D6 1849 aa21.88■■□□□ 1.09
HDLBP-238ENST00000479894 PHF14O94880 888 aa21.88■■□□□ 1.09
HDLBP-238ENST00000479894 PRELPP51888 382 aa21.88■■□□□ 1.09
HDLBP-238ENST00000479894 NBPF6Q5VWK0 638 aa21.88■■□□□ 1.09
HDLBP-238ENST00000479894 MPRIPQ6WCQ1 1025 aa21.88■■□□□ 1.09
HDLBP-238ENST00000479894 NBPF4Q96M43 638 aa21.88■■□□□ 1.09
HDLBP-238ENST00000479894 TATP17735 454 aaPredicted RBP21.87■■□□□ 1.09
HDLBP-238ENST00000479894 TGFB2P61812 414 aa21.87■■□□□ 1.09
HDLBP-238ENST00000479894 FSTL1Q12841 308 aa21.87■■□□□ 1.09
HDLBP-238ENST00000479894 NEUROD1Q13562 356 aa21.87■■□□□ 1.09
HDLBP-238ENST00000479894 NMRK2Q9NPI5 230 aa21.87■■□□□ 1.09
HDLBP-238ENST00000479894 SMG6Q86US8 1419 aaKnown RBP21.86■■□□□ 1.09
HDLBP-238ENST00000479894 PKD1L3Q7Z443 1732 aa21.86■■□□□ 1.09
HDLBP-238ENST00000479894 TNS4Q8IZW8 715 aa21.85■■□□□ 1.09
HDLBP-238ENST00000479894 PCNTO95613 3336 aa21.85■■□□□ 1.09
HDLBP-238ENST00000479894 PLEKHG2Q9H7P9 1386 aa21.85■■□□□ 1.09
HDLBP-238ENST00000479894 C16orf71Q8IYS4 520 aaPredicted RBP21.84■■□□□ 1.09
HDLBP-238ENST00000479894 CAPN15O75808 1086 aa21.83■■□□□ 1.09
HDLBP-238ENST00000479894 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
HDLBP-238ENST00000479894 BCS1LQ9Y276 419 aa21.83■■□□□ 1.09
HDLBP-238ENST00000479894 TONSLQ96HA7 1378 aa21.82■■□□□ 1.08
HDLBP-238ENST00000479894 TNRC6CQ9HCJ0 1690 aaKnown RBP21.82■■□□□ 1.08
HDLBP-238ENST00000479894 C10orf71Q711Q0 1435 aa21.81■■□□□ 1.08
HDLBP-238ENST00000479894 CYP27B1O15528 508 aa21.81■■□□□ 1.08
HDLBP-238ENST00000479894 MMP10P09238 476 aa21.81■■□□□ 1.08
HDLBP-238ENST00000479894 SMIM5Q71RC9 77 aa21.81■■□□□ 1.08
HDLBP-238ENST00000479894 USHBP1Q8N6Y0 703 aa21.81■■□□□ 1.08
HDLBP-238ENST00000479894 LOC102724428A0A0B4J2F2 783 aa21.8■■□□□ 1.08
HDLBP-238ENST00000479894 FBLN1P23142 703 aa21.8■■□□□ 1.08
HDLBP-238ENST00000479894 SIK1P57059 783 aa21.8■■□□□ 1.08
HDLBP-238ENST00000479894 ARHGAP27Q6ZUM4 889 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms