RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 NCAPD2Q15021 1401 aa25.46■■□□□ 1.67
AGRN-208ENST00000479707 DIAPH1O60610 1272 aaKnown RBP25.45■■□□□ 1.66
AGRN-208ENST00000479707 ACSBG1Q96GR2 724 aa25.45■■□□□ 1.66
AGRN-208ENST00000479707 SHANK3Q9BYB0 1731 aa25.44■■□□□ 1.66
AGRN-208ENST00000479707 APBA3O96018 575 aa25.43■■□□□ 1.66
AGRN-208ENST00000479707 BAG6P46379 1132 aa25.43■■□□□ 1.66
AGRN-208ENST00000479707 SULT6B1Q6IMI4 303 aa25.43■■□□□ 1.66
AGRN-208ENST00000479707 PTF1AQ7RTS3 328 aa25.43■■□□□ 1.66
AGRN-208ENST00000479707 AEBP1Q8IUX7 1158 aa25.43■■□□□ 1.66
AGRN-208ENST00000479707 TNS1Q9HBL0 1735 aaKnown RBP25.43■■□□□ 1.66
AGRN-208ENST00000479707 EN1Q05925 392 aaPredicted RBP25.42■■□□□ 1.66
AGRN-208ENST00000479707 PARD3Q8TEW0 1356 aa25.41■■□□□ 1.66
AGRN-208ENST00000479707 KCNQ2O43526 872 aa25.4■■□□□ 1.66
AGRN-208ENST00000479707 CFAP53Q96M91 514 aa25.4■■□□□ 1.66
AGRN-208ENST00000479707 BCL9O00512 1426 aa25.39■■□□□ 1.66
AGRN-208ENST00000479707 U2SURPO15042 1029 aaKnown RBP25.39■■□□□ 1.66
AGRN-208ENST00000479707 HMOX1P09601 288 aa25.39■■□□□ 1.66
AGRN-208ENST00000479707 BCL11BQ9C0K0 894 aaPredicted RBP25.39■■□□□ 1.66
AGRN-208ENST00000479707 SPG7Q9UQ90 795 aa25.39■■□□□ 1.66
AGRN-208ENST00000479707 PCDH11XQ9BZA7 1347 aa25.38■■□□□ 1.65
AGRN-208ENST00000479707 PCDH11YQ9BZA8 1340 aa25.38■■□□□ 1.65
AGRN-208ENST00000479707 COL3A1P02461 1466 aaPredicted RBP25.38■■□□□ 1.65
AGRN-208ENST00000479707 CYP27B1O15528 508 aa25.37■■□□□ 1.65
AGRN-208ENST00000479707 PKD1L3Q7Z443 1732 aa25.37■■□□□ 1.65
AGRN-208ENST00000479707 RALBP1Q15311 655 aa25.36■■□□□ 1.65
AGRN-208ENST00000479707 EZH2Q15910 746 aaKnown RBP25.36■■□□□ 1.65
AGRN-208ENST00000479707 SYTL4Q96C24 671 aaPredicted RBP25.35■■□□□ 1.65
AGRN-208ENST00000479707 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.34■■□□□ 1.65
AGRN-208ENST00000479707 PRIM1P49642 420 aaKnown RBP25.33■■□□□ 1.65
AGRN-208ENST00000479707 PLEKHO1Q53GL0 409 aaPredicted RBP25.33■■□□□ 1.65
AGRN-208ENST00000479707 NHSQ6T4R5 1651 aa25.32■■□□□ 1.64
AGRN-208ENST00000479707 CAMKK2Q96RR4 588 aa25.32■■□□□ 1.64
AGRN-208ENST00000479707 DOT1LQ8TEK3 1739 aa25.32■■□□□ 1.64
AGRN-208ENST00000479707 KDRP35968 1356 aa25.31■■□□□ 1.64
AGRN-208ENST00000479707 NUDCQ9Y266 331 aa25.31■■□□□ 1.64
AGRN-208ENST00000479707 PHKG2P15735 406 aa25.3■■□□□ 1.64
AGRN-208ENST00000479707 IFNL2Q8IZJ0 200 aa25.3■■□□□ 1.64
AGRN-208ENST00000479707 AMOTQ4VCS5 1084 aa25.29■■□□□ 1.64
AGRN-208ENST00000479707 ZNF530Q6P9A1 599 aaPredicted RBP25.29■■□□□ 1.64
AGRN-208ENST00000479707 BTAF1O14981 1849 aa25.28■■□□□ 1.64
AGRN-208ENST00000479707 PLSCR1O15162 318 aa25.27■■□□□ 1.64
AGRN-208ENST00000479707 U2AF1L5P0DN76 240 aaPredicted RBP25.27■■□□□ 1.64
AGRN-208ENST00000479707 U2AF1Q01081 240 aaKnown RBP eCLIP25.27■■□□□ 1.64
AGRN-208ENST00000479707 MYBBP1AQ9BQG0 1328 aaKnown RBP25.27■■□□□ 1.64
AGRN-208ENST00000479707 PRKRIP1Q9H875 184 aaPredicted RBP25.26■■□□□ 1.63
AGRN-208ENST00000479707 NKX1-1Q15270 411 aaPredicted RBP25.25■■□□□ 1.63
AGRN-208ENST00000479707 PLEKHG2Q9H7P9 1386 aa25.24■■□□□ 1.63
AGRN-208ENST00000479707 MPRIPQ6WCQ1 1025 aa25.24■■□□□ 1.63
AGRN-208ENST00000479707 C1orf141Q5JVX7 400 aa25.23■■□□□ 1.63
AGRN-208ENST00000479707 TOGARAM1Q9Y4F4 1720 aa25.23■■□□□ 1.63
AGRN-208ENST00000479707 ITGB4P16144 1822 aa25.22■■□□□ 1.63
AGRN-208ENST00000479707 MTHFSDQ2M296 383 aaKnown RBP25.22■■□□□ 1.63
AGRN-208ENST00000479707 PRKAR2BP31323 418 aa25.21■■□□□ 1.63
AGRN-208ENST00000479707 PROM2Q8N271 834 aa25.21■■□□□ 1.63
AGRN-208ENST00000479707 RSPH6AQ9H0K4 717 aa25.2■■□□□ 1.62
AGRN-208ENST00000479707 RREB1Q92766 1687 aa25.2■■□□□ 1.62
AGRN-208ENST00000479707 HSP90AB1P08238 724 aaKnown RBP25.19■■□□□ 1.62
AGRN-208ENST00000479707 TXNRD1Q16881 649 aa25.19■■□□□ 1.62
AGRN-208ENST00000479707 DCAF5Q96JK2 942 aa25.18■■□□□ 1.62
AGRN-208ENST00000479707 RGPD3A6NKT7 1758 aaPredicted RBP25.18■■□□□ 1.62
AGRN-208ENST00000479707 RGPD4Q7Z3J3 1758 aa25.18■■□□□ 1.62
AGRN-208ENST00000479707 NUP188Q5SRE5 1749 aa25.17■■□□□ 1.62
AGRN-208ENST00000479707 AKAP4Q5JQC9 854 aa25.17■■□□□ 1.62
AGRN-208ENST00000479707 PIGBQ92521 554 aa25.17■■□□□ 1.62
AGRN-208ENST00000479707 PHACTR3Q96KR7 559 aa25.17■■□□□ 1.62
AGRN-208ENST00000479707 FCHSD2O94868 740 aa25.16■■□□□ 1.62
AGRN-208ENST00000479707 TMOD3Q9NYL9 352 aa25.16■■□□□ 1.62
AGRN-208ENST00000479707 KDM6AO15550 1401 aaPredicted RBP25.15■■□□□ 1.62
AGRN-208ENST00000479707 PSDA5PKW4 1024 aaPredicted RBP25.14■■□□□ 1.62
AGRN-208ENST00000479707 ERVV-2B6SEH9 535 aa25.13■■□□□ 1.61
AGRN-208ENST00000479707 KCNQ4P56696 695 aa25.13■■□□□ 1.61
AGRN-208ENST00000479707 CABP4P57796 275 aa25.13■■□□□ 1.61
AGRN-208ENST00000479707 NBPF14Q5TI25 921 aa25.13■■□□□ 1.61
AGRN-208ENST00000479707 LGR6Q9HBX8 967 aa25.13■■□□□ 1.61
AGRN-208ENST00000479707 ANP32CO43423 234 aa25.12■■□□□ 1.61
AGRN-208ENST00000479707 R3HDM1Q15032 1099 aaKnown RBP25.12■■□□□ 1.61
AGRN-208ENST00000479707 GAS2L2Q8NHY3 880 aa25.12■■□□□ 1.61
AGRN-208ENST00000479707 LRRC4BQ9NT99 713 aa25.11■■□□□ 1.61
AGRN-208ENST00000479707 VIRMAQ69YN4 1812 aaKnown RBP25.11■■□□□ 1.61
AGRN-208ENST00000479707 SCN11AQ9UI33 1791 aa25.1■■□□□ 1.61
AGRN-208ENST00000479707 RNMTO43148 476 aaKnown RBP25.09■■□□□ 1.61
AGRN-208ENST00000479707 NFATC2IPQ8NCF5 419 aa25.09■■□□□ 1.61
AGRN-208ENST00000479707 ASAP1Q9ULH1 1129 aa25.09■■□□□ 1.61
AGRN-208ENST00000479707 LY75O60449 1722 aa25.09■■□□□ 1.61
AGRN-208ENST00000479707 PALLDQ8WX93 1383 aa25.08■■□□□ 1.61
AGRN-208ENST00000479707 NEFMP07197 916 aa25.08■■□□□ 1.61
AGRN-208ENST00000479707 ANO8Q9HCE9 1232 aaPredicted RBP25.08■■□□□ 1.61
AGRN-208ENST00000479707 CCNL1Q9UK58 526 aaPredicted RBP25.08■■□□□ 1.61
AGRN-208ENST00000479707 GNAT3A8MTJ3 354 aa25.07■■□□□ 1.6
AGRN-208ENST00000479707 SMARCC1Q92922 1105 aaPredicted RBP25.07■■□□□ 1.6
AGRN-208ENST00000479707 MAP3K5Q99683 1374 aa25.06■■□□□ 1.6
AGRN-208ENST00000479707 WDR43Q15061 677 aaKnown RBP eCLIP25.06■■□□□ 1.6
AGRN-208ENST00000479707 SLC27A3Q5K4L6 730 aa25.06■■□□□ 1.6
AGRN-208ENST00000479707 PLEKHF1Q96S99 279 aa25.06■■□□□ 1.6
AGRN-208ENST00000479707 ATG3Q9NT62 314 aa25.06■■□□□ 1.6
AGRN-208ENST00000479707 CCDC184Q52MB2 194 aa25.05■■□□□ 1.6
AGRN-208ENST00000479707 PNNQ9H307 717 aaKnown RBP25.05■■□□□ 1.6
AGRN-208ENST00000479707 IL17REQ8NFR9 667 aa25.04■■□□□ 1.6
AGRN-208ENST00000479707 SLC52A2Q9HAB3 445 aa25.04■■□□□ 1.6
AGRN-208ENST00000479707 STK32BQ9NY57 414 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms