RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 USP17L3A6NCW0 530 aa7.94□□□□□ -1.14
CCNL1-220ENST00000478454 USP17L4A6NCW7 530 aa7.94□□□□□ -1.14
CCNL1-220ENST00000478454 USP17L2Q6R6M4 530 aa7.94□□□□□ -1.14
CCNL1-220ENST00000478454 USP17L1Q7RTZ2 530 aa7.94□□□□□ -1.14
CCNL1-220ENST00000478454 STAU1O95793 577 aaKnown RBP7.93□□□□□ -1.14
CCNL1-220ENST00000478454 LMOD1P29536 600 aaPredicted RBP7.93□□□□□ -1.14
CCNL1-220ENST00000478454 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
CCNL1-220ENST00000478454 ADH1AP07327 375 aa7.92□□□□□ -1.14
CCNL1-220ENST00000478454 USP4Q13107 963 aa7.92□□□□□ -1.14
CCNL1-220ENST00000478454 ATP13A2Q9NQ11 1180 aa7.92□□□□□ -1.14
CCNL1-220ENST00000478454 POTECB2RU33 542 aa7.91□□□□□ -1.14
CCNL1-220ENST00000478454 RFX1P22670 979 aa7.91□□□□□ -1.14
CCNL1-220ENST00000478454 RELBQ01201 579 aa7.91□□□□□ -1.14
CCNL1-220ENST00000478454 EML3Q32P44 896 aa7.91□□□□□ -1.14
CCNL1-220ENST00000478454 KANK4Q5T7N3 995 aaPredicted RBP7.91□□□□□ -1.14
CCNL1-220ENST00000478454 MRPL14Q6P1L8 145 aaKnown RBP7.91□□□□□ -1.14
CCNL1-220ENST00000478454 ZNF395Q9H8N7 513 aaPredicted RBP7.91□□□□□ -1.14
CCNL1-220ENST00000478454 PCDHGA11Q9Y5H2 935 aa7.91□□□□□ -1.14
CCNL1-220ENST00000478454 SRPK2P78362 688 aaKnown RBP7.9□□□□□ -1.14
CCNL1-220ENST00000478454 CLDN10P78369 228 aa7.9□□□□□ -1.14
CCNL1-220ENST00000478454 LINC00528Q8N1L1 170 aa7.9□□□□□ -1.14
CCNL1-220ENST00000478454 PURBQ96QR8 312 aaKnown RBP7.9□□□□□ -1.14
CCNL1-220ENST00000478454 MKRN1Q9UHC7 482 aaKnown RBP7.9□□□□□ -1.14
CCNL1-220ENST00000478454 SERPINA10Q9UK55 444 aa7.9□□□□□ -1.14
CCNL1-220ENST00000478454 LZTS3O60299 673 aaPredicted RBP7.89□□□□□ -1.15
CCNL1-220ENST00000478454 MYCP01106 439 aaPredicted RBP7.89□□□□□ -1.15
CCNL1-220ENST00000478454 PTGIRP43119 386 aa7.89□□□□□ -1.15
CCNL1-220ENST00000478454 C6orf118Q5T5N4 469 aa7.89□□□□□ -1.15
CCNL1-220ENST00000478454 CCDC97Q96F63 343 aaPredicted RBP7.89□□□□□ -1.15
CCNL1-220ENST00000478454 ZFP42Q96MM3 310 aa7.89□□□□□ -1.15
CCNL1-220ENST00000478454 KIAA1024Q9UPX6 916 aa7.89□□□□□ -1.15
CCNL1-220ENST00000478454 ATP5J2-PTCD1G3V325 749 aa7.88□□□□□ -1.15
CCNL1-220ENST00000478454 ZBTB7BO15156 539 aaPredicted RBP7.88□□□□□ -1.15
CCNL1-220ENST00000478454 CDCA8Q53HL2 280 aa7.88□□□□□ -1.15
CCNL1-220ENST00000478454 TSEN34Q9BSV6 310 aaKnown RBP7.88□□□□□ -1.15
CCNL1-220ENST00000478454 ARHGEF10LQ9HCE6 1279 aa7.88□□□□□ -1.15
CCNL1-220ENST00000478454 RAB6BQ9NRW1 208 aa7.88□□□□□ -1.15
CCNL1-220ENST00000478454 GMPR2Q9P2T1 348 aaKnown RBP7.88□□□□□ -1.15
CCNL1-220ENST00000478454 NOD1Q9Y239 953 aa7.88□□□□□ -1.15
CCNL1-220ENST00000478454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.87□□□□□ -1.15
CCNL1-220ENST00000478454 A0A1W2PRU2 124 aa7.87□□□□□ -1.15
CCNL1-220ENST00000478454 SPINT1O43278 529 aa7.87□□□□□ -1.15
CCNL1-220ENST00000478454 BMP2P12643 396 aa7.87□□□□□ -1.15
CCNL1-220ENST00000478454 SCNN1DP51172 638 aa7.87□□□□□ -1.15
CCNL1-220ENST00000478454 GTF2IP78347 998 aa7.87□□□□□ -1.15
CCNL1-220ENST00000478454 CYP2U1Q7Z449 544 aa7.87□□□□□ -1.15
CCNL1-220ENST00000478454 INSM2Q96T92 566 aaPredicted RBP7.87□□□□□ -1.15
CCNL1-220ENST00000478454 ARID3AQ99856 593 aa7.87□□□□□ -1.15
CCNL1-220ENST00000478454 TMEM229AB2RXF0 380 aa7.86□□□□□ -1.15
CCNL1-220ENST00000478454 DKK1O94907 266 aa7.86□□□□□ -1.15
CCNL1-220ENST00000478454 IL2RAP01589 272 aa7.86□□□□□ -1.15
CCNL1-220ENST00000478454 CTSOP43234 321 aaPredicted RBP7.86□□□□□ -1.15
CCNL1-220ENST00000478454 CRTC2Q53ET0 693 aaPredicted RBP7.86□□□□□ -1.15
CCNL1-220ENST00000478454 OGFOD1Q8N543 542 aa7.86□□□□□ -1.15
CCNL1-220ENST00000478454 SIRT1Q96EB6 747 aa7.86□□□□□ -1.15
CCNL1-220ENST00000478454 ETNK1Q9HBU6 452 aa7.86□□□□□ -1.15
CCNL1-220ENST00000478454 GNRH1P01148 92 aa7.85□□□□□ -1.15
CCNL1-220ENST00000478454 ESF1Q9H501 851 aaKnown RBP7.85□□□□□ -1.15
CCNL1-220ENST00000478454 HRH3Q9Y5N1 445 aa7.85□□□□□ -1.15
CCNL1-220ENST00000478454 SNRPBP14678 240 aaKnown RBP7.84□□□□□ -1.15
CCNL1-220ENST00000478454 SCARF1Q14162 830 aa7.84□□□□□ -1.15
CCNL1-220ENST00000478454 FOXD4L5Q5VV16 416 aaPredicted RBP7.84□□□□□ -1.15
CCNL1-220ENST00000478454 ZNF594Q96JF6 807 aaPredicted RBP7.84□□□□□ -1.15
CCNL1-220ENST00000478454 VRTNQ9H8Y1 702 aa7.84□□□□□ -1.15
CCNL1-220ENST00000478454 SOS2Q07890 1332 aaPredicted RBP7.83□□□□□ -1.16
CCNL1-220ENST00000478454 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 MEN1O00255 615 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 UPP2O95045 317 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 RASA1P20936 1047 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 GDF10P55107 478 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 CLN3Q13286 438 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 PTK7Q13308 1070 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 CNKSR1Q969H4 720 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 XAGE2Q96GT9 111 aa7.83□□□□□ -1.16
CCNL1-220ENST00000478454 DNAAF2Q9NVR5 837 aaKnown RBP7.83□□□□□ -1.16
CCNL1-220ENST00000478454 INHAP05111 366 aa7.82□□□□□ -1.16
CCNL1-220ENST00000478454 CCDC102BQ68D86 513 aa7.82□□□□□ -1.16
CCNL1-220ENST00000478454 TRIM50Q86XT4 487 aa7.82□□□□□ -1.16
CCNL1-220ENST00000478454 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCNL1-220ENST00000478454 TRIM52Q96A61 297 aa7.82□□□□□ -1.16
CCNL1-220ENST00000478454 TRIM47Q96LD4 638 aa7.82□□□□□ -1.16
CCNL1-220ENST00000478454 ESYT1Q9BSJ8 1104 aa7.82□□□□□ -1.16
CCNL1-220ENST00000478454 PSME1Q06323 249 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 SIX5Q8N196 739 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 LARGE2Q8N3Y3 721 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 TPCN2Q8NHX9 752 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 RNF217Q8TC41 542 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 ARXQ96QS3 562 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 POLMQ9NP87 494 aaPredicted RBP7.81□□□□□ -1.16
CCNL1-220ENST00000478454 ZNF358Q9NW07 568 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 SERTAD1Q9UHV2 236 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 DNMT3LQ9UJW3 386 aa7.81□□□□□ -1.16
CCNL1-220ENST00000478454 FIGNL2A6NMB9 653 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 FAM196BA6NMK8 535 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 TTLL8A6PVC2 850 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L15C9J2P7 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L10C9JJH3 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L13C9JLJ4 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L12C9JPN9 530 aa7.8□□□□□ -1.16
CCNL1-220ENST00000478454 USP17L11C9JVI0 530 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms