RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
HDAC7-221ENST00000477203 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
HDAC7-221ENST00000477203 F6X3S4 739 aa16.93■□□□□ 0.3
HDAC7-221ENST00000477203 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
HDAC7-221ENST00000477203 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
HDAC7-221ENST00000477203 NBPF6Q5VWK0 638 aa16.93■□□□□ 0.3
HDAC7-221ENST00000477203 ZNF428Q96B54 188 aa16.93■□□□□ 0.3
HDAC7-221ENST00000477203 NBPF4Q96M43 638 aa16.93■□□□□ 0.3
HDAC7-221ENST00000477203 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
HDAC7-221ENST00000477203 ALDH1L2Q3SY69 923 aa16.92■□□□□ 0.3
HDAC7-221ENST00000477203 ZBTB40Q9NUA8 1239 aa16.92■□□□□ 0.3
HDAC7-221ENST00000477203 NALCNQ8IZF0 1738 aa16.92■□□□□ 0.3
HDAC7-221ENST00000477203 G2E3Q7L622 706 aa16.91■□□□□ 0.3
HDAC7-221ENST00000477203 CHL1O00533 1208 aa16.9■□□□□ 0.3
HDAC7-221ENST00000477203 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
HDAC7-221ENST00000477203 CHD2O14647 1828 aaKnown RBP16.89■□□□□ 0.29
HDAC7-221ENST00000477203 GCP02774 474 aa16.89■□□□□ 0.29
HDAC7-221ENST00000477203 ANKRD45Q5TZF3 282 aa16.89■□□□□ 0.29
HDAC7-221ENST00000477203 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
HDAC7-221ENST00000477203 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
HDAC7-221ENST00000477203 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-221ENST00000477203 ATF3P18847 181 aa16.88■□□□□ 0.29
HDAC7-221ENST00000477203 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
HDAC7-221ENST00000477203 IL17REQ8NFR9 667 aa16.88■□□□□ 0.29
HDAC7-221ENST00000477203 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
HDAC7-221ENST00000477203 ADAMTSL3P82987 1691 aa16.88■□□□□ 0.29
HDAC7-221ENST00000477203 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
HDAC7-221ENST00000477203 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
HDAC7-221ENST00000477203 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
HDAC7-221ENST00000477203 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
HDAC7-221ENST00000477203 AXIN2Q9Y2T1 843 aa16.87■□□□□ 0.29
HDAC7-221ENST00000477203 FMN2Q9NZ56 1722 aa16.86■□□□□ 0.29
HDAC7-221ENST00000477203 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
HDAC7-221ENST00000477203 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
HDAC7-221ENST00000477203 ADGRL3Q9HAR2 1447 aa16.86■□□□□ 0.29
HDAC7-221ENST00000477203 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
HDAC7-221ENST00000477203 ANXA1P04083 346 aa16.85■□□□□ 0.29
HDAC7-221ENST00000477203 IP6K1Q92551 441 aa16.85■□□□□ 0.29
HDAC7-221ENST00000477203 KCNQ3O43525 872 aa16.84■□□□□ 0.29
HDAC7-221ENST00000477203 MFAP1P55081 439 aaKnown RBP16.83■□□□□ 0.29
HDAC7-221ENST00000477203 TMEM94Q12767 1356 aa16.83■□□□□ 0.29
HDAC7-221ENST00000477203 ZNF530Q6P9A1 599 aaPredicted RBP16.83■□□□□ 0.28
HDAC7-221ENST00000477203 SIRT2Q8IXJ6 389 aa16.83■□□□□ 0.28
HDAC7-221ENST00000477203 MEIS3Q99687 375 aa16.83■□□□□ 0.28
HDAC7-221ENST00000477203 API5Q9BZZ5 524 aaKnown RBP16.83■□□□□ 0.28
HDAC7-221ENST00000477203 C19orf44Q9H6X5 657 aa16.83■□□□□ 0.28
HDAC7-221ENST00000477203 SPRYD3Q8NCJ5 442 aa16.83■□□□□ 0.28
HDAC7-221ENST00000477203 FKBP5Q13451 457 aaPredicted RBP16.82■□□□□ 0.28
HDAC7-221ENST00000477203 ANKRD24Q8TF21 1146 aa16.82■□□□□ 0.28
HDAC7-221ENST00000477203 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
HDAC7-221ENST00000477203 CRB1P82279 1406 aa16.81■□□□□ 0.28
HDAC7-221ENST00000477203 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
HDAC7-221ENST00000477203 STK31Q9BXU1 1019 aa16.81■□□□□ 0.28
HDAC7-221ENST00000477203 HDAC1Q13547 482 aaPredicted RBP16.81■□□□□ 0.28
HDAC7-221ENST00000477203 SMARCA5O60264 1052 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-221ENST00000477203 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
HDAC7-221ENST00000477203 ABCC4O15439 1325 aa16.8■□□□□ 0.28
HDAC7-221ENST00000477203 KDRP35968 1356 aa16.79■□□□□ 0.28
HDAC7-221ENST00000477203 C16orf71Q8IYS4 520 aaPredicted RBP16.79■□□□□ 0.28
HDAC7-221ENST00000477203 LTN1O94822 1766 aa16.79■□□□□ 0.28
HDAC7-221ENST00000477203 AAMPQ13685 434 aa16.79■□□□□ 0.28
HDAC7-221ENST00000477203 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
HDAC7-221ENST00000477203 MSH6P52701 1360 aa16.78■□□□□ 0.28
HDAC7-221ENST00000477203 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
HDAC7-221ENST00000477203 TEFQ10587 303 aa16.78■□□□□ 0.28
HDAC7-221ENST00000477203 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
HDAC7-221ENST00000477203 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
HDAC7-221ENST00000477203 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
HDAC7-221ENST00000477203 MAP3K5Q99683 1374 aa16.78■□□□□ 0.28
HDAC7-221ENST00000477203 PHAXQ9H814 394 aaKnown RBP16.78■□□□□ 0.28
HDAC7-221ENST00000477203 ARHGEF25Q86VW2 580 aa16.77■□□□□ 0.28
HDAC7-221ENST00000477203 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.27
HDAC7-221ENST00000477203 HDGFL1Q5TGJ6 251 aa16.76■□□□□ 0.27
HDAC7-221ENST00000477203 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
HDAC7-221ENST00000477203 ZNF142P52746 1687 aaPredicted RBP16.76■□□□□ 0.27
HDAC7-221ENST00000477203 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
HDAC7-221ENST00000477203 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
HDAC7-221ENST00000477203 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
HDAC7-221ENST00000477203 OTUD7AQ8TE49 926 aaPredicted RBP16.75■□□□□ 0.27
HDAC7-221ENST00000477203 SLKQ9H2G2 1235 aaPredicted RBP16.75■□□□□ 0.27
HDAC7-221ENST00000477203 USP19O94966 1318 aa16.75■□□□□ 0.27
HDAC7-221ENST00000477203 NUCB1Q02818 461 aa16.75■□□□□ 0.27
HDAC7-221ENST00000477203 FLIIQ13045 1269 aa16.75■□□□□ 0.27
HDAC7-221ENST00000477203 DDRGK1Q96HY6 314 aa16.75■□□□□ 0.27
HDAC7-221ENST00000477203 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
HDAC7-221ENST00000477203 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-221ENST00000477203 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-221ENST00000477203 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
HDAC7-221ENST00000477203 BTBD11A6QL63 1104 aa16.74■□□□□ 0.27
HDAC7-221ENST00000477203 SLC39A6Q13433 755 aa16.74■□□□□ 0.27
HDAC7-221ENST00000477203 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-221ENST00000477203 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
HDAC7-221ENST00000477203 TSHZ3Q63HK5 1081 aa16.72■□□□□ 0.27
HDAC7-221ENST00000477203 PIP4K2AP48426 406 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-221ENST00000477203 PLEKHO1Q53GL0 409 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-221ENST00000477203 EXOC6BQ9Y2D4 811 aa16.72■□□□□ 0.27
HDAC7-221ENST00000477203 KAT6BQ8WYB5 2073 aa16.72■□□□□ 0.27
HDAC7-221ENST00000477203 NWD1Q149M9 1564 aa16.72■□□□□ 0.27
HDAC7-221ENST00000477203 CHPF2Q9P2E5 772 aa16.72■□□□□ 0.27
HDAC7-221ENST00000477203 USP35Q9P2H5 1018 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms