RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 CCDC184Q52MB2 194 aa23.8■■□□□ 1.4
SREBF1-211ENST00000476994 NLRP2Q9NX02 1062 aa23.8■■□□□ 1.4
SREBF1-211ENST00000476994 PPP1R1BQ9UD71 204 aaPredicted RBP23.79■■□□□ 1.4
SREBF1-211ENST00000476994 RGPD2P0DJD1 1756 aa23.78■■□□□ 1.4
SREBF1-211ENST00000476994 TNS2Q63HR2 1409 aa23.78■■□□□ 1.4
SREBF1-211ENST00000476994 SPON1Q9HCB6 807 aa23.78■■□□□ 1.4
SREBF1-211ENST00000476994 ERBB3P21860 1342 aa23.78■■□□□ 1.4
SREBF1-211ENST00000476994 FLT4P35916 1363 aa23.78■■□□□ 1.4
SREBF1-211ENST00000476994 FAM208AQ9UK61 1670 aaKnown RBP23.76■■□□□ 1.39
SREBF1-211ENST00000476994 CCER2I3L3R5 266 aa23.76■■□□□ 1.39
SREBF1-211ENST00000476994 IL2RBP14784 551 aa23.75■■□□□ 1.39
SREBF1-211ENST00000476994 KCNQ2O43526 872 aa23.74■■□□□ 1.39
SREBF1-211ENST00000476994 HOXC9P31274 260 aa23.74■■□□□ 1.39
SREBF1-211ENST00000476994 ANKRD24Q8TF21 1146 aa23.74■■□□□ 1.39
SREBF1-211ENST00000476994 NHSQ6T4R5 1651 aa23.73■■□□□ 1.39
SREBF1-211ENST00000476994 DCAF8L1A6NGE4 600 aa23.73■■□□□ 1.39
SREBF1-211ENST00000476994 IP6K1Q92551 441 aa23.73■■□□□ 1.39
SREBF1-211ENST00000476994 HSP90AB2PQ58FF8 381 aa23.71■■□□□ 1.39
SREBF1-211ENST00000476994 AMPHP49418 695 aa23.7■■□□□ 1.38
SREBF1-211ENST00000476994 PTF1AQ7RTS3 328 aa23.7■■□□□ 1.38
SREBF1-211ENST00000476994 STK32BQ9NY57 414 aa23.7■■□□□ 1.38
SREBF1-211ENST00000476994 PPM1GO15355 546 aaPredicted RBP23.69■■□□□ 1.38
SREBF1-211ENST00000476994 TXNRD1Q16881 649 aa23.69■■□□□ 1.38
SREBF1-211ENST00000476994 CASZ1Q86V15 1759 aa23.68■■□□□ 1.38
SREBF1-211ENST00000476994 MRS2Q9HD23 443 aa23.67■■□□□ 1.38
SREBF1-211ENST00000476994 BTAF1O14981 1849 aa23.66■■□□□ 1.38
SREBF1-211ENST00000476994 IL13P35225 146 aa23.66■■□□□ 1.38
SREBF1-211ENST00000476994 LTV1Q96GA3 475 aaPredicted RBP23.66■■□□□ 1.38
SREBF1-211ENST00000476994 ACSBG1Q96GR2 724 aa23.66■■□□□ 1.38
SREBF1-211ENST00000476994 ANO8Q9HCE9 1232 aaPredicted RBP23.66■■□□□ 1.38
SREBF1-211ENST00000476994 EIF4A2Q14240 407 aaKnown RBP23.65■■□□□ 1.38
SREBF1-211ENST00000476994 PROM2Q8N271 834 aa23.65■■□□□ 1.38
SREBF1-211ENST00000476994 CFAP53Q96M91 514 aa23.65■■□□□ 1.38
SREBF1-211ENST00000476994 NCAPD2Q15021 1401 aa23.65■■□□□ 1.38
SREBF1-211ENST00000476994 PNISRQ8TF01 805 aaKnown RBP23.63■■□□□ 1.37
SREBF1-211ENST00000476994 DIAPH1O60610 1272 aaKnown RBP23.62■■□□□ 1.37
SREBF1-211ENST00000476994 SLC15A2Q16348 729 aa23.62■■□□□ 1.37
SREBF1-211ENST00000476994 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
SREBF1-211ENST00000476994 ZBTB7AO95365 584 aa23.59■■□□□ 1.37
SREBF1-211ENST00000476994 IGSF1Q8N6C5 1336 aa23.59■■□□□ 1.37
SREBF1-211ENST00000476994 KDRP35968 1356 aa23.56■■□□□ 1.36
SREBF1-211ENST00000476994 EYA1Q99502 592 aa23.56■■□□□ 1.36
SREBF1-211ENST00000476994 ATF5Q9Y2D1 282 aaPredicted RBP23.55■■□□□ 1.36
SREBF1-211ENST00000476994 NBPF6Q5VWK0 638 aa23.54■■□□□ 1.36
SREBF1-211ENST00000476994 SYTL4Q96C24 671 aaPredicted RBP23.54■■□□□ 1.36
SREBF1-211ENST00000476994 NBPF4Q96M43 638 aa23.54■■□□□ 1.36
SREBF1-211ENST00000476994 PDGFDQ9GZP0 370 aaPredicted RBP23.54■■□□□ 1.36
SREBF1-211ENST00000476994 MTFR1LQ9H019 292 aa23.54■■□□□ 1.36
SREBF1-211ENST00000476994 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
SREBF1-211ENST00000476994 YY1P25490 414 aa23.53■■□□□ 1.36
SREBF1-211ENST00000476994 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
SREBF1-211ENST00000476994 NUDCQ9Y266 331 aa23.52■■□□□ 1.36
SREBF1-211ENST00000476994 PAPPAQ13219 1627 aa23.51■■□□□ 1.35
SREBF1-211ENST00000476994 SLC27A3Q5K4L6 730 aa23.51■■□□□ 1.35
SREBF1-211ENST00000476994 ADAMTS8Q9UP79 889 aa23.51■■□□□ 1.35
SREBF1-211ENST00000476994 U2SURPO15042 1029 aaKnown RBP23.5■■□□□ 1.35
SREBF1-211ENST00000476994 AEBP1Q8IUX7 1158 aa23.5■■□□□ 1.35
SREBF1-211ENST00000476994 RAPGEF4Q8WZA2 1011 aa23.5■■□□□ 1.35
SREBF1-211ENST00000476994 DLG5Q8TDM6 1919 aa23.5■■□□□ 1.35
SREBF1-211ENST00000476994 PKD1L3Q7Z443 1732 aa23.5■■□□□ 1.35
SREBF1-211ENST00000476994 SHANK3Q9BYB0 1731 aa23.5■■□□□ 1.35
SREBF1-211ENST00000476994 U2AF1L5P0DN76 240 aaPredicted RBP23.49■■□□□ 1.35
SREBF1-211ENST00000476994 U2AF1Q01081 240 aaKnown RBP eCLIP23.49■■□□□ 1.35
SREBF1-211ENST00000476994 WDR43Q15061 677 aaKnown RBP eCLIP23.49■■□□□ 1.354e-6■■□□□ 14
SREBF1-211ENST00000476994 RSPH6AQ9H0K4 717 aa23.49■■□□□ 1.35
SREBF1-211ENST00000476994 QSER1Q2KHR3 1735 aa23.49■■□□□ 1.35
SREBF1-211ENST00000476994 PTGER2P43116 358 aa23.48■■□□□ 1.35
SREBF1-211ENST00000476994 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
SREBF1-211ENST00000476994 FAM9BQ8IZU0 186 aa23.47■■□□□ 1.35
SREBF1-211ENST00000476994 USHBP1Q8N6Y0 703 aa23.47■■□□□ 1.35
SREBF1-211ENST00000476994 LY75O60449 1722 aa23.46■■□□□ 1.35
SREBF1-211ENST00000476994 MEGF6O75095 1541 aa23.46■■□□□ 1.35
SREBF1-211ENST00000476994 HMOX1P09601 288 aa23.46■■□□□ 1.35
SREBF1-211ENST00000476994 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
SREBF1-211ENST00000476994 PLEKHF1Q96S99 279 aa23.46■■□□□ 1.35
SREBF1-211ENST00000476994 VIRMAQ69YN4 1812 aaKnown RBP23.45■■□□□ 1.34
SREBF1-211ENST00000476994 FCHSD2O94868 740 aa23.45■■□□□ 1.34
SREBF1-211ENST00000476994 TATP17735 454 aaPredicted RBP23.45■■□□□ 1.34
SREBF1-211ENST00000476994 HMGB2P26583 209 aaKnown RBP23.44■■□□□ 1.34
SREBF1-211ENST00000476994 LRRC4BQ9NT99 713 aa23.44■■□□□ 1.34
SREBF1-211ENST00000476994 ZNF827Q17R98 1081 aa23.43■■□□□ 1.34
SREBF1-211ENST00000476994 SLC16A10Q8TF71 515 aa23.43■■□□□ 1.34
SREBF1-211ENST00000476994 FHDC1Q9C0D6 1143 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-211ENST00000476994 ARXQ96QS3 562 aa23.42■■□□□ 1.34
SREBF1-211ENST00000476994 TFCP2L1Q9NZI6 479 aa23.42■■□□□ 1.34
SREBF1-211ENST00000476994 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
SREBF1-211ENST00000476994 PCDH11XQ9BZA7 1347 aa23.41■■□□□ 1.34
SREBF1-211ENST00000476994 PCDH11YQ9BZA8 1340 aa23.41■■□□□ 1.34
SREBF1-211ENST00000476994 PRKAR2BP31323 418 aa23.41■■□□□ 1.34
SREBF1-211ENST00000476994 SYT17Q9BSW7 474 aa23.41■■□□□ 1.34
SREBF1-211ENST00000476994 CHD4Q14839 1912 aa23.41■■□□□ 1.34
SREBF1-211ENST00000476994 POLD1P28340 1107 aa23.4■■□□□ 1.34
SREBF1-211ENST00000476994 TUBGCP6Q96RT7 1819 aa23.4■■□□□ 1.34
SREBF1-211ENST00000476994 AKT1S1Q96B36 256 aa23.39■■□□□ 1.33
SREBF1-211ENST00000476994 CCNL1Q9UK58 526 aaPredicted RBP23.39■■□□□ 1.33
SREBF1-211ENST00000476994 CCDC146Q8IYE0 955 aa23.38■■□□□ 1.33
SREBF1-211ENST00000476994 PHACTR3Q96KR7 559 aa23.38■■□□□ 1.33
SREBF1-211ENST00000476994 SGIP1Q9BQI5 828 aa23.38■■□□□ 1.33
SREBF1-211ENST00000476994 RUNDC1Q96C34 613 aa23.37■■□□□ 1.33
SREBF1-211ENST00000476994 ITGB4P16144 1822 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms