RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 TNNT2P45379 298 aaPredicted RBP19.48■□□□□ 0.71
SLC6A8-209ENST00000476466 SMG6Q86US8 1419 aaKnown RBP19.48■□□□□ 0.71
SLC6A8-209ENST00000476466 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
SLC6A8-209ENST00000476466 PLSCR1O15162 318 aa19.47■□□□□ 0.71
SLC6A8-209ENST00000476466 PPM1GO15355 546 aaPredicted RBP19.46■□□□□ 0.71
SLC6A8-209ENST00000476466 DDX54Q8TDD1 881 aaKnown RBP19.46■□□□□ 0.71
SLC6A8-209ENST00000476466 WASHC2AQ641Q2 1341 aa19.45■□□□□ 0.7
SLC6A8-209ENST00000476466 NSD2O96028 1365 aa19.44■□□□□ 0.7
SLC6A8-209ENST00000476466 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
SLC6A8-209ENST00000476466 PKD1L3Q7Z443 1732 aa19.43■□□□□ 0.7
SLC6A8-209ENST00000476466 ZCRB1Q8TBF4 217 aaKnown RBP19.43■□□□□ 0.7
SLC6A8-209ENST00000476466 TXNRD1Q16881 649 aa19.42■□□□□ 0.7
SLC6A8-209ENST00000476466 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
SLC6A8-209ENST00000476466 TOGARAM1Q9Y4F4 1720 aa19.42■□□□□ 0.7
SLC6A8-209ENST00000476466 EYA1Q99502 592 aa19.41■□□□□ 0.7
SLC6A8-209ENST00000476466 CASZ1Q86V15 1759 aa19.4■□□□□ 0.7
SLC6A8-209ENST00000476466 EIF4A2Q14240 407 aaKnown RBP19.4■□□□□ 0.7
SLC6A8-209ENST00000476466 PDGFDQ9GZP0 370 aaPredicted RBP19.4■□□□□ 0.7
SLC6A8-209ENST00000476466 KAT6BQ8WYB5 2073 aa19.39■□□□□ 0.69
SLC6A8-209ENST00000476466 RAPGEF4Q8WZA2 1011 aa19.39■□□□□ 0.69
SLC6A8-209ENST00000476466 CYP27B1O15528 508 aa19.38■□□□□ 0.69
SLC6A8-209ENST00000476466 PER1O15534 1290 aaPredicted RBP19.38■□□□□ 0.69
SLC6A8-209ENST00000476466 TATP17735 454 aaPredicted RBP19.37■□□□□ 0.69
SLC6A8-209ENST00000476466 PRIM1P49642 420 aaKnown RBP19.37■□□□□ 0.69
SLC6A8-209ENST00000476466 LRRC4BQ9NT99 713 aa19.37■□□□□ 0.69
SLC6A8-209ENST00000476466 KNSTRNQ9Y448 316 aa19.36■□□□□ 0.69
SLC6A8-209ENST00000476466 NBPF14Q5TI25 921 aa19.35■□□□□ 0.69
SLC6A8-209ENST00000476466 MORC1Q86VD1 984 aa19.35■□□□□ 0.69
SLC6A8-209ENST00000476466 LY75O60449 1722 aa19.34■□□□□ 0.69
SLC6A8-209ENST00000476466 IGSF1Q8N6C5 1336 aa19.34■□□□□ 0.69
SLC6A8-209ENST00000476466 PCDH11XQ9BZA7 1347 aa19.34■□□□□ 0.69
SLC6A8-209ENST00000476466 PCDH11YQ9BZA8 1340 aa19.34■□□□□ 0.69
SLC6A8-209ENST00000476466 KCNQ4P56696 695 aa19.34■□□□□ 0.69
SLC6A8-209ENST00000476466 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
SLC6A8-209ENST00000476466 ZNF827Q17R98 1081 aa19.33■□□□□ 0.68
SLC6A8-209ENST00000476466 AEBP1Q8IUX7 1158 aa19.31■□□□□ 0.68
SLC6A8-209ENST00000476466 ITGB4P16144 1822 aa19.3■□□□□ 0.68
SLC6A8-209ENST00000476466 SLC15A2Q16348 729 aa19.3■□□□□ 0.68
SLC6A8-209ENST00000476466 CC2D1BQ5T0F9 858 aaKnown RBP19.3■□□□□ 0.68
SLC6A8-209ENST00000476466 UTRNP46939 3433 aa19.3■□□□□ 0.68
SLC6A8-209ENST00000476466 TUBGCP6Q96RT7 1819 aa19.3■□□□□ 0.68
SLC6A8-209ENST00000476466 GOLGB1Q14789 3259 aaKnown RBP19.27■□□□□ 0.68
SLC6A8-209ENST00000476466 STK32BQ9NY57 414 aa19.27■□□□□ 0.68
SLC6A8-209ENST00000476466 ZBTB7AO95365 584 aa19.26■□□□□ 0.67
SLC6A8-209ENST00000476466 IL13P35225 146 aa19.26■□□□□ 0.67
SLC6A8-209ENST00000476466 NKX1-1Q15270 411 aaPredicted RBP19.26■□□□□ 0.67
SLC6A8-209ENST00000476466 AKT1S1Q96B36 256 aa19.26■□□□□ 0.67
SLC6A8-209ENST00000476466 COL3A1P02461 1466 aaPredicted RBP19.26■□□□□ 0.67
SLC6A8-209ENST00000476466 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
SLC6A8-209ENST00000476466 PHKG2P15735 406 aa19.25■□□□□ 0.67
SLC6A8-209ENST00000476466 MTHFSP49914 203 aa19.25■□□□□ 0.67
SLC6A8-209ENST00000476466 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
SLC6A8-209ENST00000476466 KDRP35968 1356 aa19.24■□□□□ 0.67
SLC6A8-209ENST00000476466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.24■□□□□ 0.67
SLC6A8-209ENST00000476466 SPG7Q9UQ90 795 aa19.24■□□□□ 0.67
SLC6A8-209ENST00000476466 PALLDQ8WX93 1383 aa19.23■□□□□ 0.67
SLC6A8-209ENST00000476466 SLC27A3Q5K4L6 730 aa19.23■□□□□ 0.67
SLC6A8-209ENST00000476466 MPRIPQ6WCQ1 1025 aa19.23■□□□□ 0.67
SLC6A8-209ENST00000476466 KDM6AO15550 1401 aaPredicted RBP19.23■□□□□ 0.67
SLC6A8-209ENST00000476466 QSER1Q2KHR3 1735 aa19.22■□□□□ 0.67
SLC6A8-209ENST00000476466 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
SLC6A8-209ENST00000476466 C5P01031 1676 aa19.22■□□□□ 0.67
SLC6A8-209ENST00000476466 PTGER2P43116 358 aa19.22■□□□□ 0.67
SLC6A8-209ENST00000476466 PIGBQ92521 554 aa19.22■□□□□ 0.67
SLC6A8-209ENST00000476466 SPON1Q9HCB6 807 aa19.22■□□□□ 0.67
SLC6A8-209ENST00000476466 CCNL1Q9UK58 526 aaPredicted RBP19.21■□□□□ 0.67
SLC6A8-209ENST00000476466 TAF1LQ8IZX4 1826 aa19.21■□□□□ 0.67
SLC6A8-209ENST00000476466 SULT6B1Q6IMI4 303 aa19.2■□□□□ 0.66
SLC6A8-209ENST00000476466 ATF5Q9Y2D1 282 aaPredicted RBP19.2■□□□□ 0.66
SLC6A8-209ENST00000476466 PNPLA7Q6ZV29 1317 aa19.2■□□□□ 0.66
SLC6A8-209ENST00000476466 IFNL2Q8IZJ0 200 aa19.19■□□□□ 0.66
SLC6A8-209ENST00000476466 SGIP1Q9BQI5 828 aa19.19■□□□□ 0.66
SLC6A8-209ENST00000476466 AMIGO3Q86WK7 504 aa19.18■□□□□ 0.66
SLC6A8-209ENST00000476466 ZNF530Q6P9A1 599 aaPredicted RBP19.17■□□□□ 0.66
SLC6A8-209ENST00000476466 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
SLC6A8-209ENST00000476466 HMOX1P09601 288 aa19.16■□□□□ 0.66
SLC6A8-209ENST00000476466 C4BP0C0L5 1744 aa19.16■□□□□ 0.66
SLC6A8-209ENST00000476466 COL24A1Q17RW2 1714 aa19.15■□□□□ 0.66
SLC6A8-209ENST00000476466 MTFR1LQ9H019 292 aa19.15■□□□□ 0.66
SLC6A8-209ENST00000476466 PLEKHO1Q53GL0 409 aaPredicted RBP19.14■□□□□ 0.65
SLC6A8-209ENST00000476466 SMIM5Q71RC9 77 aa19.14■□□□□ 0.65
SLC6A8-209ENST00000476466 TMOD3Q9NYL9 352 aa19.14■□□□□ 0.65
SLC6A8-209ENST00000476466 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
SLC6A8-209ENST00000476466 TFCP2L1Q9NZI6 479 aa19.13■□□□□ 0.65
SLC6A8-209ENST00000476466 DIAPH1O60610 1272 aaKnown RBP19.12■□□□□ 0.65
SLC6A8-209ENST00000476466 ITPK1Q13572 414 aa19.12■□□□□ 0.65
SLC6A8-209ENST00000476466 AMOTQ4VCS5 1084 aa19.12■□□□□ 0.65
SLC6A8-209ENST00000476466 SLC4A9Q96Q91 983 aa19.12■□□□□ 0.65
SLC6A8-209ENST00000476466 PPP1R1BQ9UD71 204 aaPredicted RBP19.12■□□□□ 0.65
SLC6A8-209ENST00000476466 UBR3Q6ZT12 1888 aa19.11■□□□□ 0.65
SLC6A8-209ENST00000476466 SCN11AQ9UI33 1791 aa19.11■□□□□ 0.65
SLC6A8-209ENST00000476466 LOC102724428A0A0B4J2F2 783 aa19.11■□□□□ 0.65
SLC6A8-209ENST00000476466 SIK1P57059 783 aa19.11■□□□□ 0.65
SLC6A8-209ENST00000476466 COL23A1Q86Y22 540 aaPredicted RBP19.11■□□□□ 0.65
SLC6A8-209ENST00000476466 LINC00116Q8NCU8 138 aa19.11■□□□□ 0.65
SLC6A8-209ENST00000476466 DCAF5Q96JK2 942 aa19.11■□□□□ 0.65
SLC6A8-209ENST00000476466 SMARCC1Q92922 1105 aaPredicted RBP19.1■□□□□ 0.65
SLC6A8-209ENST00000476466 ADAMTS7Q9UKP4 1686 aa19.1■□□□□ 0.65
SLC6A8-209ENST00000476466 ERVV-2B6SEH9 535 aa19.09■□□□□ 0.65
SLC6A8-209ENST00000476466 MRC1P22897 1456 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms