RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 PPM1GO15355 546 aaPredicted RBP44.36■■■■■ 4.69
CHKB-207ENST00000476289 ZCRB1Q8TBF4 217 aaKnown RBP44.34■■■■■ 4.69
CHKB-207ENST00000476289 KAT6BQ8WYB5 2073 aa44.34■■■■■ 4.69
CHKB-207ENST00000476289 ANO8Q9HCE9 1232 aaPredicted RBP44.33■■■■■ 4.69
CHKB-207ENST00000476289 TXNRD1Q16881 649 aa44.32■■■■■ 4.69
CHKB-207ENST00000476289 POLKQ9UBT6 870 aa44.32■■■■■ 4.69
CHKB-207ENST00000476289 TNNT2P45379 298 aaPredicted RBP44.31■■■■■ 4.68
CHKB-207ENST00000476289 KIF7Q2M1P5 1343 aa44.3■■■■■ 4.68
CHKB-207ENST00000476289 RAPGEF4Q8WZA2 1011 aa44.3■■■■■ 4.68
CHKB-207ENST00000476289 DOT1LQ8TEK3 1739 aa44.3■■■■■ 4.68
CHKB-207ENST00000476289 WASHC2AQ641Q2 1341 aa44.29■■■■■ 4.68
CHKB-207ENST00000476289 NCAPD2Q15021 1401 aa44.26■■■■■ 4.68
CHKB-207ENST00000476289 NSD2O96028 1365 aa44.26■■■■■ 4.68
CHKB-207ENST00000476289 TATP17735 454 aaPredicted RBP44.24■■■■■ 4.67
CHKB-207ENST00000476289 PKD1L3Q7Z443 1732 aa44.17■■■■■ 4.66
CHKB-207ENST00000476289 PRIM1P49642 420 aaKnown RBP44.17■■■■■ 4.66
CHKB-207ENST00000476289 CASZ1Q86V15 1759 aa44.17■■■■■ 4.66
CHKB-207ENST00000476289 SYTL4Q96C24 671 aaPredicted RBP44.16■■■■■ 4.66
CHKB-207ENST00000476289 EYA1Q99502 592 aa44.16■■■■■ 4.66
CHKB-207ENST00000476289 PAPPAQ13219 1627 aa44.16■■■■■ 4.66
CHKB-207ENST00000476289 KNSTRNQ9Y448 316 aa44.15■■■■■ 4.66
CHKB-207ENST00000476289 EIF4A2Q14240 407 aaKnown RBP44.13■■■■■ 4.66
CHKB-207ENST00000476289 PCDH11XQ9BZA7 1347 aa44.13■■■■■ 4.65
CHKB-207ENST00000476289 PCDH11YQ9BZA8 1340 aa44.13■■■■■ 4.65
CHKB-207ENST00000476289 MORC1Q86VD1 984 aa44.12■■■■■ 4.65
CHKB-207ENST00000476289 STK32BQ9NY57 414 aa44.11■■■■■ 4.65
CHKB-207ENST00000476289 PDGFDQ9GZP0 370 aaPredicted RBP44.1■■■■■ 4.65
CHKB-207ENST00000476289 LRRC4BQ9NT99 713 aa44.09■■■■■ 4.65
CHKB-207ENST00000476289 CYP27B1O15528 508 aa44.08■■■■■ 4.65
CHKB-207ENST00000476289 SLC15A2Q16348 729 aa44.08■■■■■ 4.65
CHKB-207ENST00000476289 AMER1Q5JTC6 1135 aaPredicted RBP44.08■■■■■ 4.65
CHKB-207ENST00000476289 LY75O60449 1722 aa44.04■■■■■ 4.64
CHKB-207ENST00000476289 TOGARAM1Q9Y4F4 1720 aa44.04■■■■■ 4.64
CHKB-207ENST00000476289 SPON1Q9HCB6 807 aa44.02■■■■■ 4.64
CHKB-207ENST00000476289 IGSF1Q8N6C5 1336 aa43.99■■■■■ 4.63
CHKB-207ENST00000476289 PER1O15534 1290 aaPredicted RBP43.99■■■■■ 4.63
CHKB-207ENST00000476289 ZNF827Q17R98 1081 aa43.99■■■■■ 4.63
CHKB-207ENST00000476289 SLC27A3Q5K4L6 730 aa43.97■■■■■ 4.63
CHKB-207ENST00000476289 SPG7Q9UQ90 795 aa43.97■■■■■ 4.63
CHKB-207ENST00000476289 KCNQ4P56696 695 aa43.96■■■■■ 4.63
CHKB-207ENST00000476289 ITGB4P16144 1822 aa43.94■■■■■ 4.63
CHKB-207ENST00000476289 ZBTB7AO95365 584 aa43.94■■■■■ 4.62
CHKB-207ENST00000476289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP43.94■■■■■ 4.623e-9■■□□□ 11.7
CHKB-207ENST00000476289 NKX1-1Q15270 411 aaPredicted RBP43.91■■■■■ 4.62
CHKB-207ENST00000476289 AKT1S1Q96B36 256 aa43.9■■■■■ 4.62
CHKB-207ENST00000476289 MPRIPQ6WCQ1 1025 aa43.88■■■■■ 4.62
CHKB-207ENST00000476289 PLEKHG2Q9H7P9 1386 aa43.87■■■■■ 4.61
CHKB-207ENST00000476289 CC2D1BQ5T0F9 858 aaKnown RBP43.86■■■■■ 4.61
CHKB-207ENST00000476289 CCNL1Q9UK58 526 aaPredicted RBP43.86■■■■■ 4.61
CHKB-207ENST00000476289 TUBGCP6Q96RT7 1819 aa43.85■■■■■ 4.61
CHKB-207ENST00000476289 PHKG2P15735 406 aa43.85■■■■■ 4.61
CHKB-207ENST00000476289 PPP1R1BQ9UD71 204 aaPredicted RBP43.85■■■■■ 4.61
CHKB-207ENST00000476289 ATF5Q9Y2D1 282 aaPredicted RBP43.85■■■■■ 4.61
CHKB-207ENST00000476289 QSER1Q2KHR3 1735 aa43.85■■■■■ 4.61
CHKB-207ENST00000476289 AEBP1Q8IUX7 1158 aa43.83■■■■■ 4.61
CHKB-207ENST00000476289 PTGER2P43116 358 aa43.82■■■■■ 4.61
CHKB-207ENST00000476289 IFNL2Q8IZJ0 200 aa43.82■■■■■ 4.61
CHKB-207ENST00000476289 PALLDQ8WX93 1383 aa43.81■■■■■ 4.6
CHKB-207ENST00000476289 IL13P35225 146 aa43.8■■■■■ 4.6
CHKB-207ENST00000476289 MTHFSP49914 203 aa43.79■■■■■ 4.6
CHKB-207ENST00000476289 PIGBQ92521 554 aa43.79■■■■■ 4.6
CHKB-207ENST00000476289 MTFR1LQ9H019 292 aa43.79■■■■■ 4.6
CHKB-207ENST00000476289 NPC1L1Q9UHC9 1359 aa43.78■■■■■ 4.6
CHKB-207ENST00000476289 C5P01031 1676 aa43.77■■■■■ 4.6
CHKB-207ENST00000476289 PNPLA7Q6ZV29 1317 aa43.76■■■■■ 4.6
CHKB-207ENST00000476289 TFCP2L1Q9NZI6 479 aa43.74■■■■■ 4.59
CHKB-207ENST00000476289 KDRP35968 1356 aa43.74■■■■■ 4.59
CHKB-207ENST00000476289 TAF1LQ8IZX4 1826 aa43.73■■■■■ 4.59
CHKB-207ENST00000476289 CNGB1Q14028 1251 aaPredicted RBP43.73■■■■■ 4.59
CHKB-207ENST00000476289 SULT6B1Q6IMI4 303 aa43.73■■■■■ 4.59
CHKB-207ENST00000476289 SGIP1Q9BQI5 828 aa43.73■■■■■ 4.59
CHKB-207ENST00000476289 PLEKHO1Q53GL0 409 aaPredicted RBP43.72■■■■■ 4.59
CHKB-207ENST00000476289 SMARCC1Q92922 1105 aaPredicted RBP43.7■■■■■ 4.59
CHKB-207ENST00000476289 TMOD3Q9NYL9 352 aa43.7■■■■■ 4.59
CHKB-207ENST00000476289 ZNF530Q6P9A1 599 aaPredicted RBP43.68■■■■■ 4.58
CHKB-207ENST00000476289 AMOTQ4VCS5 1084 aa43.67■■■■■ 4.58
CHKB-207ENST00000476289 KDM6AO15550 1401 aaPredicted RBP43.65■■■■■ 4.58
CHKB-207ENST00000476289 ASAP1Q9ULH1 1129 aa43.64■■■■■ 4.58
CHKB-207ENST00000476289 DCAF5Q96JK2 942 aa43.62■■■■■ 4.57
CHKB-207ENST00000476289 COL3A1P02461 1466 aaPredicted RBP43.62■■■■■ 4.57
CHKB-207ENST00000476289 C4BP0C0L5 1744 aa43.62■■■■■ 4.57
CHKB-207ENST00000476289 COL24A1Q17RW2 1714 aa43.62■■■■■ 4.57
CHKB-207ENST00000476289 HSP90AB1P08238 724 aaKnown RBP43.61■■■■■ 4.57
CHKB-207ENST00000476289 SLC16A10Q8TF71 515 aa43.61■■■■■ 4.57
CHKB-207ENST00000476289 ERVV-2B6SEH9 535 aa43.58■■■■■ 4.57
CHKB-207ENST00000476289 DIAPH1O60610 1272 aaKnown RBP43.58■■■■■ 4.57
CHKB-207ENST00000476289 ATG3Q9NT62 314 aa43.58■■■■■ 4.57
CHKB-207ENST00000476289 LOC102724428A0A0B4J2F2 783 aa43.57■■■■■ 4.57
CHKB-207ENST00000476289 HMOX1P09601 288 aa43.57■■■■■ 4.57
CHKB-207ENST00000476289 SIK1P57059 783 aa43.57■■■■■ 4.57
CHKB-207ENST00000476289 COL23A1Q86Y22 540 aaPredicted RBP43.56■■■■■ 4.56
CHKB-207ENST00000476289 C1orf141Q5JVX7 400 aa43.55■■■■■ 4.56
CHKB-207ENST00000476289 FHDC1Q9C0D6 1143 aaPredicted RBP43.55■■■■■ 4.56
CHKB-207ENST00000476289 ARXQ96QS3 562 aa43.54■■■■■ 4.56
CHKB-207ENST00000476289 LINC00116Q8NCU8 138 aa43.51■■■■■ 4.56
CHKB-207ENST00000476289 MSH5O43196 834 aa43.5■■■■■ 4.55
CHKB-207ENST00000476289 HMGB2P26583 209 aaKnown RBP43.5■■■■■ 4.55
CHKB-207ENST00000476289 ITPK1Q13572 414 aa43.5■■■■■ 4.55
CHKB-207ENST00000476289 AMIGO3Q86WK7 504 aa43.5■■■■■ 4.55
CHKB-207ENST00000476289 UBR3Q6ZT12 1888 aa43.5■■■■■ 4.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms