RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
PTPN7-208ENST00000476061 SLC27A3Q5K4L6 730 aa13.78□□□□□ -0.2
PTPN7-208ENST00000476061 NBPF6Q5VWK0 638 aa13.78□□□□□ -0.2
PTPN7-208ENST00000476061 NBPF4Q96M43 638 aa13.78□□□□□ -0.2
PTPN7-208ENST00000476061 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
PTPN7-208ENST00000476061 PDGFDQ9GZP0 370 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-208ENST00000476061 PTGER2P43116 358 aa13.77□□□□□ -0.21
PTPN7-208ENST00000476061 NSD3Q9BZ95 1437 aa13.77□□□□□ -0.21
PTPN7-208ENST00000476061 MTFR1LQ9H019 292 aa13.77□□□□□ -0.21
PTPN7-208ENST00000476061 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
PTPN7-208ENST00000476061 PCGF6Q9BYE7 350 aa13.76□□□□□ -0.21
PTPN7-208ENST00000476061 NSD2O96028 1365 aa13.75□□□□□ -0.21
PTPN7-208ENST00000476061 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
PTPN7-208ENST00000476061 ZBTB7AO95365 584 aa13.75□□□□□ -0.21
PTPN7-208ENST00000476061 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
PTPN7-208ENST00000476061 RAPGEF4Q8WZA2 1011 aa13.75□□□□□ -0.21
PTPN7-208ENST00000476061 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
PTPN7-208ENST00000476061 LRRC4BQ9NT99 713 aa13.75□□□□□ -0.21
PTPN7-208ENST00000476061 TUBGCP6Q96RT7 1819 aa13.75□□□□□ -0.21
PTPN7-208ENST00000476061 NCAPD2Q15021 1401 aa13.74□□□□□ -0.21
PTPN7-208ENST00000476061 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-208ENST00000476061 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
PTPN7-208ENST00000476061 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
PTPN7-208ENST00000476061 ITGB4P16144 1822 aa13.74□□□□□ -0.21
PTPN7-208ENST00000476061 HMGB2P26583 209 aaKnown RBP13.73□□□□□ -0.21
PTPN7-208ENST00000476061 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
PTPN7-208ENST00000476061 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
PTPN7-208ENST00000476061 WASHC2AQ641Q2 1341 aa13.72□□□□□ -0.21
PTPN7-208ENST00000476061 PCDH11XQ9BZA7 1347 aa13.72□□□□□ -0.21
PTPN7-208ENST00000476061 PCDH11YQ9BZA8 1340 aa13.72□□□□□ -0.21
PTPN7-208ENST00000476061 TAF1LQ8IZX4 1826 aa13.72□□□□□ -0.21
PTPN7-208ENST00000476061 ZNF827Q17R98 1081 aa13.72□□□□□ -0.21
PTPN7-208ENST00000476061 SYTL4Q96C24 671 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-208ENST00000476061 EIF4G2P78344 907 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTPN7-208ENST00000476061 USHBP1Q8N6Y0 703 aa13.71□□□□□ -0.21
PTPN7-208ENST00000476061 EMILIN1Q9Y6C2 1016 aa13.71□□□□□ -0.21
PTPN7-208ENST00000476061 C5P01031 1676 aa13.71□□□□□ -0.21
PTPN7-208ENST00000476061 MAP3K5Q99683 1374 aa13.71□□□□□ -0.22
PTPN7-208ENST00000476061 TOGARAM1Q9Y4F4 1720 aa13.7□□□□□ -0.22
PTPN7-208ENST00000476061 SYT17Q9BSW7 474 aa13.7□□□□□ -0.22
PTPN7-208ENST00000476061 PLEKHG2Q9H7P9 1386 aa13.7□□□□□ -0.22
PTPN7-208ENST00000476061 PNPLA7Q6ZV29 1317 aa13.68□□□□□ -0.22
PTPN7-208ENST00000476061 ARXQ96QS3 562 aa13.68□□□□□ -0.22
PTPN7-208ENST00000476061 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-208ENST00000476061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPN7-208ENST00000476061 POLKQ9UBT6 870 aa13.68□□□□□ -0.22
PTPN7-208ENST00000476061 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-208ENST00000476061 CHD4Q14839 1912 aa13.68□□□□□ -0.22
PTPN7-208ENST00000476061 CYP27B1O15528 508 aa13.67□□□□□ -0.22
PTPN7-208ENST00000476061 YY1P25490 414 aa13.67□□□□□ -0.22
PTPN7-208ENST00000476061 NKX1-1Q15270 411 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-208ENST00000476061 TFCP2L1Q9NZI6 479 aa13.67□□□□□ -0.22
PTPN7-208ENST00000476061 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-208ENST00000476061 HSPA5P11021 654 aaKnown RBP13.66□□□□□ -0.22
PTPN7-208ENST00000476061 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-208ENST00000476061 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
PTPN7-208ENST00000476061 EYA1Q99502 592 aa13.65□□□□□ -0.22
PTPN7-208ENST00000476061 PALLDQ8WX93 1383 aa13.64□□□□□ -0.23
PTPN7-208ENST00000476061 POLD1P28340 1107 aa13.64□□□□□ -0.23
PTPN7-208ENST00000476061 KCNQ4P56696 695 aa13.64□□□□□ -0.23
PTPN7-208ENST00000476061 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-208ENST00000476061 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
PTPN7-208ENST00000476061 C4BP0C0L5 1744 aa13.64□□□□□ -0.23
PTPN7-208ENST00000476061 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
PTPN7-208ENST00000476061 PANK3Q9H999 370 aa13.63□□□□□ -0.23
PTPN7-208ENST00000476061 UBR3Q6ZT12 1888 aa13.63□□□□□ -0.23
PTPN7-208ENST00000476061 EIF4A2Q14240 407 aaKnown RBP13.62□□□□□ -0.23
PTPN7-208ENST00000476061 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
PTPN7-208ENST00000476061 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
PTPN7-208ENST00000476061 ZNF831Q5JPB2 1677 aa13.62□□□□□ -0.23
PTPN7-208ENST00000476061 COL23A1Q86Y22 540 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-208ENST00000476061 IGSF1Q8N6C5 1336 aa13.61□□□□□ -0.23
PTPN7-208ENST00000476061 PHKG2P15735 406 aa13.6□□□□□ -0.23
PTPN7-208ENST00000476061 PIGBQ92521 554 aa13.6□□□□□ -0.23
PTPN7-208ENST00000476061 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-208ENST00000476061 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
PTPN7-208ENST00000476061 KNSTRNQ9Y448 316 aa13.57□□□□□ -0.24
PTPN7-208ENST00000476061 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
PTPN7-208ENST00000476061 MSH5O43196 834 aa13.56□□□□□ -0.24
PTPN7-208ENST00000476061 HSP90AB1P08238 724 aaKnown RBP13.56□□□□□ -0.24
PTPN7-208ENST00000476061 SIK1P57059 783 aa13.56□□□□□ -0.24
PTPN7-208ENST00000476061 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
PTPN7-208ENST00000476061 MORC1Q86VD1 984 aa13.56□□□□□ -0.24
PTPN7-208ENST00000476061 COL5A3P25940 1745 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-208ENST00000476061 ERVV-2B6SEH9 535 aa13.55□□□□□ -0.24
PTPN7-208ENST00000476061 SSFA2P28290 1259 aa13.55□□□□□ -0.24
PTPN7-208ENST00000476061 PLEKHO1Q53GL0 409 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-208ENST00000476061 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
PTPN7-208ENST00000476061 AK7Q96M32 723 aa13.55□□□□□ -0.24
PTPN7-208ENST00000476061 SCN11AQ9UI33 1791 aa13.54□□□□□ -0.24
PTPN7-208ENST00000476061 GPR162Q16538 588 aa13.54□□□□□ -0.24
PTPN7-208ENST00000476061 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
PTPN7-208ENST00000476061 KDRP35968 1356 aa13.54□□□□□ -0.24
PTPN7-208ENST00000476061 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
PTPN7-208ENST00000476061 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-208ENST00000476061 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
PTPN7-208ENST00000476061 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
PTPN7-208ENST00000476061 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
PTPN7-208ENST00000476061 KIF7Q2M1P5 1343 aa13.53□□□□□ -0.24
PTPN7-208ENST00000476061 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms