RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 SYCE3A1L190 88 aa20.86■□□□□ 0.93
LPCAT1-202ENST00000475622 TDO2P48775 406 aa20.86■□□□□ 0.93
LPCAT1-202ENST00000475622 CASKIN1Q8WXD9 1431 aa20.86■□□□□ 0.93
LPCAT1-202ENST00000475622 BMP2KQ9NSY1 1161 aaPredicted RBP20.86■□□□□ 0.93
LPCAT1-202ENST00000475622 ARHGAP5Q13017 1502 aa20.86■□□□□ 0.93
LPCAT1-202ENST00000475622 DDX11Q96FC9 970 aa20.86■□□□□ 0.93
LPCAT1-202ENST00000475622 CCDC184Q52MB2 194 aa20.85■□□□□ 0.93
LPCAT1-202ENST00000475622 MAP3K11Q16584 847 aa20.85■□□□□ 0.93
LPCAT1-202ENST00000475622 SEPT11Q9NVA2 429 aaKnown RBP20.85■□□□□ 0.93
LPCAT1-202ENST00000475622 SMTNL1A8MU46 457 aa20.85■□□□□ 0.93
LPCAT1-202ENST00000475622 CASTP20810 708 aaKnown RBP20.84■□□□□ 0.93
LPCAT1-202ENST00000475622 IQCEQ6IPM2 695 aa20.84■□□□□ 0.93
LPCAT1-202ENST00000475622 CCDC102AQ96A19 550 aa20.84■□□□□ 0.93
LPCAT1-202ENST00000475622 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
LPCAT1-202ENST00000475622 EPB41L2O43491 1005 aaKnown RBP20.84■□□□□ 0.93
LPCAT1-202ENST00000475622 TMEM57Q8N5G2 664 aa20.84■□□□□ 0.93
LPCAT1-202ENST00000475622 ANKRD18AQ8IVF6 992 aa20.84■□□□□ 0.93
LPCAT1-202ENST00000475622 SPG7Q9UQ90 795 aa20.84■□□□□ 0.93
LPCAT1-202ENST00000475622 FERMT3Q86UX7 667 aa20.83■□□□□ 0.93
LPCAT1-202ENST00000475622 NUTM1Q86Y26 1132 aa20.83■□□□□ 0.93
LPCAT1-202ENST00000475622 EIF5P55010 431 aaKnown RBP20.83■□□□□ 0.93
LPCAT1-202ENST00000475622 CFAP100Q494V2 611 aa20.83■□□□□ 0.93
LPCAT1-202ENST00000475622 ARHGAP29Q52LW3 1261 aa20.83■□□□□ 0.93
LPCAT1-202ENST00000475622 CAMK4Q16566 473 aa20.83■□□□□ 0.92
LPCAT1-202ENST00000475622 TOM1L2Q6ZVM7 507 aa20.83■□□□□ 0.92
LPCAT1-202ENST00000475622 UBXN4Q92575 508 aa20.83■□□□□ 0.92
LPCAT1-202ENST00000475622 PKNOX2Q96KN3 472 aa20.83■□□□□ 0.92
LPCAT1-202ENST00000475622 EXOC6BQ9Y2D4 811 aa20.83■□□□□ 0.92
LPCAT1-202ENST00000475622 ZSCAN30Q86W11 494 aa20.82■□□□□ 0.92
LPCAT1-202ENST00000475622 RRS1Q15050 365 aaKnown RBP20.82■□□□□ 0.92
LPCAT1-202ENST00000475622 DHX37Q8IY37 1157 aaKnown RBP20.81■□□□□ 0.92
LPCAT1-202ENST00000475622 PIBF1Q8WXW3 757 aa20.81■□□□□ 0.92
LPCAT1-202ENST00000475622 KIAA1328Q86T90 577 aa20.81■□□□□ 0.92
LPCAT1-202ENST00000475622 KIAA1107Q9UPP5 1409 aa20.81■□□□□ 0.92
LPCAT1-202ENST00000475622 RAI14Q9P0K7 980 aa20.81■□□□□ 0.92
LPCAT1-202ENST00000475622 ERBINQ96RT1 1412 aa20.81■□□□□ 0.92
LPCAT1-202ENST00000475622 PDIA4P13667 645 aaKnown RBP20.81■□□□□ 0.92
LPCAT1-202ENST00000475622 BTBD11A6QL63 1104 aa20.8■□□□□ 0.92
LPCAT1-202ENST00000475622 PDCL2Q8N4E4 241 aa20.8■□□□□ 0.92
LPCAT1-202ENST00000475622 FCHSD2O94868 740 aa20.8■□□□□ 0.92
LPCAT1-202ENST00000475622 WASF1Q92558 559 aa20.8■□□□□ 0.92
LPCAT1-202ENST00000475622 SLFN5Q08AF3 891 aa20.8■□□□□ 0.92
LPCAT1-202ENST00000475622 CFTRP13569 1480 aa20.8■□□□□ 0.92
LPCAT1-202ENST00000475622 IDH1O75874 414 aaKnown RBP20.8■□□□□ 0.92
LPCAT1-202ENST00000475622 ERICH4A6NGS2 130 aa20.79■□□□□ 0.92
LPCAT1-202ENST00000475622 CCDC83Q8IWF9 413 aa20.79■□□□□ 0.92
LPCAT1-202ENST00000475622 TAF4BQ92750 862 aa20.79■□□□□ 0.92
LPCAT1-202ENST00000475622 SPINK5Q9NQ38 1064 aaPredicted RBP20.79■□□□□ 0.92
LPCAT1-202ENST00000475622 IMMTQ16891 758 aaKnown RBP20.78■□□□□ 0.92
LPCAT1-202ENST00000475622 LRP2BPQ9P2M1 347 aa20.78■□□□□ 0.92
LPCAT1-202ENST00000475622 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
LPCAT1-202ENST00000475622 RBM5P52756 815 aaKnown RBP eCLIP20.78■□□□□ 0.923e-9■■■■■ 33.1
LPCAT1-202ENST00000475622 NFE2L2Q16236 605 aa20.78■□□□□ 0.92
LPCAT1-202ENST00000475622 ANKRD30BQ9BXX2 1392 aa20.77■□□□□ 0.92
LPCAT1-202ENST00000475622 RRP9O43818 475 aaKnown RBP20.77■□□□□ 0.92
LPCAT1-202ENST00000475622 TMPOP42166 694 aaKnown RBP20.77■□□□□ 0.92
LPCAT1-202ENST00000475622 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.92
LPCAT1-202ENST00000475622 SFPQP23246 707 aaKnown RBP eCLIP20.77■□□□□ 0.929e-7■■■■□ 24.8
LPCAT1-202ENST00000475622 AIDAQ96BJ3 306 aa20.76■□□□□ 0.91
LPCAT1-202ENST00000475622 EZRP15311 586 aaKnown RBP20.76■□□□□ 0.91
LPCAT1-202ENST00000475622 MX1P20591 662 aa20.76■□□□□ 0.91
LPCAT1-202ENST00000475622 TAF3Q5VWG9 929 aa20.76■□□□□ 0.91
LPCAT1-202ENST00000475622 PRPF40BQ6NWY9 871 aaKnown RBP20.76■□□□□ 0.91
LPCAT1-202ENST00000475622 TMCO3Q6UWJ1 677 aa20.75■□□□□ 0.91
LPCAT1-202ENST00000475622 ZSCAN29Q8IWY8 852 aaPredicted RBP20.75■□□□□ 0.91
LPCAT1-202ENST00000475622 PTPN14Q15678 1187 aa20.75■□□□□ 0.91
LPCAT1-202ENST00000475622 CCDC148Q8NFR7 591 aa20.75■□□□□ 0.91
LPCAT1-202ENST00000475622 CEP131Q9UPN4 1083 aa20.75■□□□□ 0.91
LPCAT1-202ENST00000475622 ZNF76P36508 570 aa20.75■□□□□ 0.91
LPCAT1-202ENST00000475622 KIF1BPQ96EK5 621 aa20.75■□□□□ 0.91
LPCAT1-202ENST00000475622 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.916e-7■■■■■ 26.8
LPCAT1-202ENST00000475622 SMARCA5O60264 1052 aaPredicted RBP20.74■□□□□ 0.91
LPCAT1-202ENST00000475622 MIS18AQ9NYP9 233 aa20.74■□□□□ 0.91
LPCAT1-202ENST00000475622 USP8P40818 1118 aa20.74■□□□□ 0.91
LPCAT1-202ENST00000475622 USP5P45974 858 aa20.74■□□□□ 0.91
LPCAT1-202ENST00000475622 CRACR2AQ9BSW2 395 aa20.74■□□□□ 0.91
LPCAT1-202ENST00000475622 GLRX3O76003 335 aaKnown RBP20.74■□□□□ 0.91
LPCAT1-202ENST00000475622 KIF2AO00139 706 aaPredicted RBP20.73■□□□□ 0.91
LPCAT1-202ENST00000475622 THUMPD2Q9BTF0 503 aaKnown RBP20.73■□□□□ 0.91
LPCAT1-202ENST00000475622 ZNF397Q8NF99 534 aaPredicted RBP20.73■□□□□ 0.91
LPCAT1-202ENST00000475622 U3KPZ7 1027 aaPredicted RBP20.73■□□□□ 0.91
LPCAT1-202ENST00000475622 C9orf84Q5VXU9 1444 aa20.73■□□□□ 0.91
LPCAT1-202ENST00000475622 ABCF2Q9UG63 623 aa20.73■□□□□ 0.91
LPCAT1-202ENST00000475622 JAKMIP3Q5VZ66 844 aa20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 ANO10Q9NW15 660 aa20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 CCDC183Q5T5S1 534 aa20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 GBP3Q9H0R5 595 aa20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 PPP1R1BQ9UD71 204 aaPredicted RBP20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 SSR1P43307 286 aaKnown RBP20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 DUSP27Q5VZP5 1158 aa20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 SCAND2PQ9GZW5 306 aaPredicted RBP20.72■□□□□ 0.91
LPCAT1-202ENST00000475622 KLHL10Q6JEL2 608 aa20.71■□□□□ 0.91
LPCAT1-202ENST00000475622 THEMISQ8N1K5 641 aaPredicted RBP20.71■□□□□ 0.91
LPCAT1-202ENST00000475622 ZSCAN12O43309 604 aa20.71■□□□□ 0.91
LPCAT1-202ENST00000475622 GNAT3A8MTJ3 354 aa20.71■□□□□ 0.91
LPCAT1-202ENST00000475622 GBP2P32456 591 aaPredicted RBP20.71■□□□□ 0.91
LPCAT1-202ENST00000475622 SLC52A1Q9NWF4 448 aa20.71■□□□□ 0.91
LPCAT1-202ENST00000475622 ATAD2Q6PL18 1390 aa20.71■□□□□ 0.91
LPCAT1-202ENST00000475622 IGHMBP2P38935 993 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms