RNA–Protein interactions for RNA: ENST00000475172.5

PNCK-227, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 5

Gene PNCK, Length 877 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-227	ENST00000475172	CAMKK2	Q96RR4	588 aa		33.37	■■■□□ 2.93
PNCK-227	ENST00000475172	TNS1	Q9HBL0	1735 aa	Known RBP	33.36	■■■□□ 2.93
PNCK-227	ENST00000475172	MTHFS	P49914	203 aa		33.36	■■■□□ 2.93
PNCK-227	ENST00000475172	KCNQ2	O43526	872 aa		33.34	■■■□□ 2.93
PNCK-227	ENST00000475172	SBF2	Q86WG5	1849 aa		33.3	■■■□□ 2.92
PNCK-227	ENST00000475172	NCAPD2	Q15021	1401 aa		33.28	■■■□□ 2.92
PNCK-227	ENST00000475172	PARD3	Q8TEW0	1356 aa		33.28	■■■□□ 2.92
PNCK-227	ENST00000475172	IGSF1	Q8N6C5	1336 aa		33.28	■■■□□ 2.92
PNCK-227	ENST00000475172	PLSCR1	O15162	318 aa		33.27	■■■□□ 2.92
PNCK-227	ENST00000475172	SPG7	Q9UQ90	795 aa		33.26	■■■□□ 2.91
PNCK-227	ENST00000475172	PCDH11X	Q9BZA7	1347 aa		33.26	■■■□□ 2.91
PNCK-227	ENST00000475172	PCDH11Y	Q9BZA8	1340 aa		33.26	■■■□□ 2.91
PNCK-227	ENST00000475172	IL13	P35225	146 aa		33.25	■■■□□ 2.91
PNCK-227	ENST00000475172	SYTL4	Q96C24	671 aa	Predicted RBP	33.24	■■■□□ 2.91
PNCK-227	ENST00000475172	KAT6B	Q8WYB5	2073 aa		33.22	■■■□□ 2.91
PNCK-227	ENST00000475172	PRIM1	P49642	420 aa	Known RBP	33.22	■■■□□ 2.91
PNCK-227	ENST00000475172	CYP27B1	O15528	508 aa		33.21	■■■□□ 2.91
PNCK-227	ENST00000475172	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.21	■■■□□ 2.91
PNCK-227	ENST00000475172	SULT6B1	Q6IMI4	303 aa		33.2	■■■□□ 2.91
PNCK-227	ENST00000475172	DIAPH1	O60610	1272 aa	Known RBP	33.19	■■■□□ 2.9
PNCK-227	ENST00000475172	DDX10	Q13206	875 aa	Known RBP	33.19	■■■□□ 2.9
PNCK-227	ENST00000475172	AEBP1	Q8IUX7	1158 aa		33.19	■■■□□ 2.9
PNCK-227	ENST00000475172	SHANK3	Q9BYB0	1731 aa		33.17	■■■□□ 2.9
PNCK-227	ENST00000475172	NHS	Q6T4R5	1651 aa		33.17	■■■□□ 2.9
PNCK-227	ENST00000475172	PSD	A5PKW4	1024 aa	Predicted RBP	33.16	■■■□□ 2.9
PNCK-227	ENST00000475172	NBPF14	Q5TI25	921 aa		33.16	■■■□□ 2.9
PNCK-227	ENST00000475172	PROM2	Q8N271	834 aa		33.16	■■■□□ 2.9
PNCK-227	ENST00000475172	TXNRD1	Q16881	649 aa		33.14	■■■□□ 2.9
PNCK-227	ENST00000475172	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.14	■■■□□ 2.9
PNCK-227	ENST00000475172	PPP2R1A	P30153	589 aa		33.13	■■■□□ 2.89
PNCK-227	ENST00000475172	R3HDM1	Q15032	1099 aa	Known RBP	33.13	■■■□□ 2.89
PNCK-227	ENST00000475172	IFNL2	Q8IZJ0	200 aa		33.13	■■■□□ 2.89
PNCK-227	ENST00000475172	CFAP53	Q96M91	514 aa		33.12	■■■□□ 2.89
PNCK-227	ENST00000475172	NKX1-1	Q15270	411 aa	Predicted RBP	33.11	■■■□□ 2.89
PNCK-227	ENST00000475172	AMOT	Q4VCS5	1084 aa		33.11	■■■□□ 2.89
PNCK-227	ENST00000475172	HMOX1	P09601	288 aa		33.1	■■■□□ 2.89
PNCK-227	ENST00000475172	PHKG2	P15735	406 aa		33.1	■■■□□ 2.89
PNCK-227	ENST00000475172	PKD1L3	Q7Z443	1732 aa		33.1	■■■□□ 2.89
PNCK-227	ENST00000475172	PLEKHG2	Q9H7P9	1386 aa		33.09	■■■□□ 2.89
PNCK-227	ENST00000475172	KDR	P35968	1356 aa		33.09	■■■□□ 2.89
PNCK-227	ENST00000475172	U2SURP	O15042	1029 aa	Known RBP	33.08	■■■□□ 2.89
PNCK-227	ENST00000475172	RREB1	Q92766	1687 aa		33.07	■■■□□ 2.89
PNCK-227	ENST00000475172	MPRIP	Q6WCQ1	1025 aa		33.07	■■■□□ 2.88
PNCK-227	ENST00000475172	DOT1L	Q8TEK3	1739 aa		33.06	■■■□□ 2.88
PNCK-227	ENST00000475172	BTAF1	O14981	1849 aa		33.06	■■■□□ 2.88
PNCK-227	ENST00000475172	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.06	■■■□□ 2.88
PNCK-227	ENST00000475172	RGPD4	Q7Z3J3	1758 aa		33.06	■■■□□ 2.88
PNCK-227	ENST00000475172	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.05	■■■□□ 2.88
PNCK-227	ENST00000475172	COL3A1	P02461	1466 aa	Predicted RBP	33.03	■■■□□ 2.88
PNCK-227	ENST00000475172	NUP188	Q5SRE5	1749 aa		33.02	■■■□□ 2.88
PNCK-227	ENST00000475172	HSP90AB1	P08238	724 aa	Known RBP	33.01	■■■□□ 2.87
PNCK-227	ENST00000475172	C1orf141	Q5JVX7	400 aa		33.01	■■■□□ 2.87
PNCK-227	ENST00000475172	NUDC	Q9Y266	331 aa		33	■■■□□ 2.87
PNCK-227	ENST00000475172	SLC27A3	Q5K4L6	730 aa		32.99	■■■□□ 2.87
PNCK-227	ENST00000475172	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.99	■■■□□ 2.87
PNCK-227	ENST00000475172	PIGB	Q92521	554 aa		32.98	■■■□□ 2.87
PNCK-227	ENST00000475172	DCAF5	Q96JK2	942 aa		32.98	■■■□□ 2.87
PNCK-227	ENST00000475172	LRRC4B	Q9NT99	713 aa		32.97	■■■□□ 2.87
PNCK-227	ENST00000475172	STK32B	Q9NY57	414 aa		32.97	■■■□□ 2.87
PNCK-227	ENST00000475172	TMOD3	Q9NYL9	352 aa		32.97	■■■□□ 2.87
PNCK-227	ENST00000475172	RALBP1	Q15311	655 aa		32.96	■■■□□ 2.87
PNCK-227	ENST00000475172	KCNQ4	P56696	695 aa		32.94	■■■□□ 2.86
PNCK-227	ENST00000475172	ERVV-2	B6SEH9	535 aa		32.93	■■■□□ 2.86
PNCK-227	ENST00000475172	SMARCC1	Q92922	1105 aa	Predicted RBP	32.93	■■■□□ 2.86
PNCK-227	ENST00000475172	CCNL1	Q9UK58	526 aa	Predicted RBP	32.93	■■■□□ 2.86
PNCK-227	ENST00000475172	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.92	■■■□□ 2.86
PNCK-227	ENST00000475172	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.92	■■■□□ 2.86	2e-7	■■■■□ 25.8
PNCK-227	ENST00000475172	SLC15A2	Q16348	729 aa		32.92	■■■□□ 2.86
PNCK-227	ENST00000475172	TOGARAM1	Q9Y4F4	1720 aa		32.91	■■■□□ 2.86
PNCK-227	ENST00000475172	MTHFSD	Q2M296	383 aa	Known RBP	32.91	■■■□□ 2.86
PNCK-227	ENST00000475172	AKAP4	Q5JQC9	854 aa		32.91	■■■□□ 2.86
PNCK-227	ENST00000475172	CABP4	P57796	275 aa		32.9	■■■□□ 2.86
PNCK-227	ENST00000475172	PALLD	Q8WX93	1383 aa		32.9	■■■□□ 2.86
PNCK-227	ENST00000475172	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.88	■■■□□ 2.85
PNCK-227	ENST00000475172	ITGB4	P16144	1822 aa		32.87	■■■□□ 2.85
PNCK-227	ENST00000475172	KDM6A	O15550	1401 aa	Predicted RBP	32.86	■■■□□ 2.85
PNCK-227	ENST00000475172	PRKAR2B	P31323	418 aa		32.86	■■■□□ 2.85
PNCK-227	ENST00000475172	ASAP1	Q9ULH1	1129 aa		32.86	■■■□□ 2.85
PNCK-227	ENST00000475172	SRCAP	Q6ZRS2	3230 aa		32.86	■■■□□ 2.85
PNCK-227	ENST00000475172	RSPH6A	Q9H0K4	717 aa		32.85	■■■□□ 2.85
PNCK-227	ENST00000475172	ZNF827	Q17R98	1081 aa		32.83	■■■□□ 2.85
PNCK-227	ENST00000475172	NFATC2IP	Q8NCF5	419 aa		32.83	■■■□□ 2.85
PNCK-227	ENST00000475172	ATG3	Q9NT62	314 aa		32.83	■■■□□ 2.85
PNCK-227	ENST00000475172	FCHSD2	O94868	740 aa		32.82	■■■□□ 2.84
PNCK-227	ENST00000475172	GAS2L2	Q8NHY3	880 aa		32.82	■■■□□ 2.84
PNCK-227	ENST00000475172	AKT1S1	Q96B36	256 aa		32.82	■■■□□ 2.84
PNCK-227	ENST00000475172	LGR6	Q9HBX8	967 aa		32.82	■■■□□ 2.84
PNCK-227	ENST00000475172	LY75	O60449	1722 aa		32.81	■■■□□ 2.84
PNCK-227	ENST00000475172	PHACTR3	Q96KR7	559 aa		32.81	■■■□□ 2.84
PNCK-227	ENST00000475172	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.81	■■■□□ 2.84
PNCK-227	ENST00000475172	HMGB2	P26583	209 aa	Known RBP	32.8	■■■□□ 2.84
PNCK-227	ENST00000475172	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.79	■■■□□ 2.84
PNCK-227	ENST00000475172	RNMT	O43148	476 aa	Known RBP	32.79	■■■□□ 2.84
PNCK-227	ENST00000475172	TFCP2L1	Q9NZI6	479 aa		32.79	■■■□□ 2.84
PNCK-227	ENST00000475172	LOC102724428	A0A0B4J2F2	783 aa		32.78	■■■□□ 2.84
PNCK-227	ENST00000475172	SIK1	P57059	783 aa		32.78	■■■□□ 2.84
PNCK-227	ENST00000475172	PAPPA	Q13219	1627 aa		32.77	■■■□□ 2.84
PNCK-227	ENST00000475172	GNAT3	A8MTJ3	354 aa		32.76	■■■□□ 2.83
PNCK-227	ENST00000475172	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.75	■■■□□ 2.83
PNCK-227	ENST00000475172	SLC52A2	Q9HAB3	445 aa		32.75	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms